Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RNA5SP402-201ENST00000517148 110 ntBASIC2.81□□□□□ -1.96
CALR3Q96L12 MIR4287-201ENST00000579398 78 ntBASIC2.81□□□□□ -1.96
CALR3Q96L12 MIR4635-201ENST00000583759 79 ntBASIC2.81□□□□□ -1.96
CALR3Q96L12 AC243994.1-201ENST00000618627 109 ntBASIC2.81□□□□□ -1.96
CALR3Q96L12 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.81□□□□□ -1.96
CALR3Q96L12 AC095038.3-201ENST00000634439 195 ntBASIC2.81□□□□□ -1.96
CALR3Q96L12 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CALR3Q96L12 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.8□□□□□ -1.96
CALR3Q96L12 Y_RNA.537-201ENST00000384626 109 ntBASIC2.8□□□□□ -1.96
CALR3Q96L12 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.8□□□□□ -1.96
CALR3Q96L12 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.8□□□□□ -1.96
CALR3Q96L12 AL161935.2-201ENST00000414627 60 ntBASIC2.8□□□□□ -1.96
CALR3Q96L12 RPL23AP6-201ENST00000446637 472 ntBASIC2.8□□□□□ -1.96
CALR3Q96L12 RNU7-123P-201ENST00000515911 60 ntBASIC2.8□□□□□ -1.96
CALR3Q96L12 AC022254.1-201ENST00000567857 235 ntBASIC2.8□□□□□ -1.96
CALR3Q96L12 MIR6798-201ENST00000612887 67 ntBASIC2.8□□□□□ -1.96
CALR3Q96L12 SNORA63.4-201ENST00000362763 126 ntBASIC2.79□□□□□ -1.96
CALR3Q96L12 RNU6-153P-201ENST00000364422 104 ntBASIC2.79□□□□□ -1.96
CALR3Q96L12 SNORA6-201ENST00000384033 151 ntBASIC2.79□□□□□ -1.96
CALR3Q96L12 MIR144-201ENST00000384886 86 ntBASIC2.79□□□□□ -1.96
CALR3Q96L12 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CALR3Q96L12 RNA5SP181-201ENST00000410246 98 ntBASIC2.79□□□□□ -1.96
CALR3Q96L12 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.79□□□□□ -1.96
CALR3Q96L12 RNA5SP282-201ENST00000516355 108 ntBASIC2.79□□□□□ -1.96
CALR3Q96L12 RNU7-43P-201ENST00000516554 64 ntBASIC2.79□□□□□ -1.96
CALR3Q96L12 AC007012.1-201ENST00000567192 175 ntBASIC2.79□□□□□ -1.96
CALR3Q96L12 MIR4325-201ENST00000583049 90 ntBASIC2.79□□□□□ -1.96
CALR3Q96L12 MIR4791-201ENST00000607666 84 ntBASIC2.79□□□□□ -1.96
CALR3Q96L12 AL137847.3-201ENST00000611521 109 ntBASIC2.79□□□□□ -1.96
CALR3Q96L12 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.79□□□□□ -1.96
CALR3Q96L12 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
CALR3Q96L12 AC092881.1-201ENST00000638218 2733 ntBASIC2.79□□□□□ -1.96
CALR3Q96L12 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CALR3Q96L12 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
CALR3Q96L12 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CALR3Q96L12 RNU6-661P-201ENST00000362409 107 ntBASIC2.78□□□□□ -1.96
CALR3Q96L12 RNU6-755P-201ENST00000364400 103 ntBASIC2.78□□□□□ -1.96
CALR3Q96L12 AC092017.2-201ENST00000427600 362 ntBASIC2.78□□□□□ -1.96
CALR3Q96L12 AC087499.2-201ENST00000432861 149 ntBASIC2.78□□□□□ -1.96
CALR3Q96L12 RNU6-322P-201ENST00000516010 103 ntBASIC2.78□□□□□ -1.96
CALR3Q96L12 RNU2-35P-201ENST00000516446 142 ntBASIC2.78□□□□□ -1.96
CALR3Q96L12 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CALR3Q96L12 RNY4P6-201ENST00000363667 96 ntBASIC2.77□□□□□ -1.97
CALR3Q96L12 RNU6-439P-201ENST00000384188 106 ntBASIC2.77□□□□□ -1.97
CALR3Q96L12 MIR513A1-201ENST00000385138 129 ntBASIC2.77□□□□□ -1.97
CALR3Q96L12 MIR653-201ENST00000385279 96 ntBASIC2.77□□□□□ -1.97
CALR3Q96L12 RNU6-1319P-201ENST00000390855 104 ntBASIC2.77□□□□□ -1.97
CALR3Q96L12 RNU6-747P-201ENST00000390928 104 ntBASIC2.77□□□□□ -1.97
CALR3Q96L12 RNU6-241P-201ENST00000391148 104 ntBASIC2.77□□□□□ -1.97
CALR3Q96L12 RNA5SP144-201ENST00000410846 116 ntBASIC2.77□□□□□ -1.97
CALR3Q96L12 RNU6-177P-201ENST00000411257 104 ntBASIC2.77□□□□□ -1.97
CALR3Q96L12 RNU7-73P-201ENST00000458743 63 ntBASIC2.77□□□□□ -1.97
CALR3Q96L12 RNA5SP341-201ENST00000516261 117 ntBASIC2.77□□□□□ -1.97
CALR3Q96L12 RNU6-412P-201ENST00000516434 106 ntBASIC2.77□□□□□ -1.97
CALR3Q96L12 MIR3152-201ENST00000579801 74 ntBASIC2.77□□□□□ -1.97
CALR3Q96L12 MIR6840-201ENST00000611937 71 ntBASIC2.77□□□□□ -1.97
CALR3Q96L12 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CALR3Q96L12 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CALR3Q96L12 RNA5SP259-201ENST00000365541 109 ntBASIC2.76□□□□□ -1.97
CALR3Q96L12 RNA5SP261-201ENST00000410536 106 ntBASIC2.76□□□□□ -1.97
CALR3Q96L12 AL022718.1-201ENST00000412004 84 ntBASIC2.76□□□□□ -1.97
CALR3Q96L12 BX510359.1-201ENST00000456973 237 ntBASIC2.76□□□□□ -1.97
CALR3Q96L12 RNU6-893P-201ENST00000458841 100 ntBASIC2.76□□□□□ -1.97
CALR3Q96L12 MIR4713-201ENST00000582691 75 ntBASIC2.76□□□□□ -1.97
CALR3Q96L12 AC009831.4-201ENST00000620744 325 ntBASIC2.76□□□□□ -1.97
CALR3Q96L12 SCARNA4.1-201ENST00000628597 123 ntBASIC2.76□□□□□ -1.97
CALR3Q96L12 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CALR3Q96L12 SNORA51.10-201ENST00000384418 136 ntBASIC2.75□□□□□ -1.97
CALR3Q96L12 RNA5SP210-201ENST00000391034 120 ntBASIC2.75□□□□□ -1.97
CALR3Q96L12 RNU7-45P-201ENST00000459460 63 ntBASIC2.75□□□□□ -1.97
CALR3Q96L12 DNAJC19P9-201ENST00000555084 351 ntBASIC2.75□□□□□ -1.97
CALR3Q96L12 Y_RNA.281-201ENST00000364774 94 ntBASIC2.74□□□□□ -1.97
CALR3Q96L12 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CALR3Q96L12 AL023284.1-201ENST00000403956 276 ntBASIC2.74□□□□□ -1.97
CALR3Q96L12 S100A11P2-201ENST00000467589 312 ntBASIC2.74□□□□□ -1.97
CALR3Q96L12 AC234781.5-201ENST00000508429 271 ntBASIC2.74□□□□□ -1.97
CALR3Q96L12 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.74□□□□□ -1.97
CALR3Q96L12 MIR4679-2-201ENST00000578358 77 ntBASIC2.74□□□□□ -1.97
CALR3Q96L12 MIR4764-201ENST00000580680 88 ntBASIC2.74□□□□□ -1.97
CALR3Q96L12 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.74□□□□□ -1.97
CALR3Q96L12 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CALR3Q96L12 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CALR3Q96L12 AC131280.1-202ENST00000624067 4211 ntBASIC2.73□□□□□ -1.97
CALR3Q96L12 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CALR3Q96L12 RNU1-112P-201ENST00000364401 164 ntBASIC2.73□□□□□ -1.97
CALR3Q96L12 MIR520C-201ENST00000385005 87 ntBASIC2.73□□□□□ -1.97
CALR3Q96L12 AL451046.2-201ENST00000403074 277 ntBASIC2.73□□□□□ -1.97
CALR3Q96L12 MIR4299-201ENST00000577899 72 ntBASIC2.73□□□□□ -1.97
CALR3Q96L12 MIR4429-201ENST00000580105 73 ntBASIC2.73□□□□□ -1.97
CALR3Q96L12 U4.3-201ENST00000621047 82 ntBASIC2.73□□□□□ -1.97
CALR3Q96L12 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.73□□□□□ -1.97
CALR3Q96L12 AP000648.3-201ENST00000623539 4507 ntBASIC2.72□□□□□ -1.97
CALR3Q96L12 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CALR3Q96L12 RNA5SP456-201ENST00000364002 114 ntBASIC2.72□□□□□ -1.97
CALR3Q96L12 RNU6-1104P-201ENST00000384723 104 ntBASIC2.72□□□□□ -1.97
CALR3Q96L12 MIR670-201ENST00000390142 98 ntBASIC2.72□□□□□ -1.97
CALR3Q96L12 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CALR3Q96L12 POLR2J4-204ENST00000418424 324 ntBASIC2.72□□□□□ -1.97
CALR3Q96L12 snoU13.16-201ENST00000459350 104 ntBASIC2.72□□□□□ -1.97
CALR3Q96L12 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms