Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HPS1Q92902 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HPS1Q92902 MIR452-201ENST00000385020 85 ntBASIC3.16□□□□□ -1.9
HPS1Q92902 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HPS1Q92902 U8.16-201ENST00000391279 133 ntBASIC3.16□□□□□ -1.9
HPS1Q92902 SNORA26.7-201ENST00000391288 122 ntBASIC3.16□□□□□ -1.9
HPS1Q92902 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.16□□□□□ -1.9
HPS1Q92902 RN7SKP123-201ENST00000410732 291 ntBASIC3.16□□□□□ -1.9
HPS1Q92902 RNU6-602P-201ENST00000411155 105 ntBASIC3.16□□□□□ -1.9
HPS1Q92902 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.16□□□□□ -1.9
HPS1Q92902 RNU7-79P-201ENST00000516082 62 ntBASIC3.16□□□□□ -1.9
HPS1Q92902 RNU7-137P-201ENST00000516788 62 ntBASIC3.16□□□□□ -1.9
HPS1Q92902 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.16□□□□□ -1.9
HPS1Q92902 MIR5195-201ENST00000583555 115 ntBASIC3.16□□□□□ -1.9
HPS1Q92902 AC022149.2-201ENST00000621061 203 ntBASIC3.16□□□□□ -1.9
HPS1Q92902 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.16□□□□□ -1.9
HPS1Q92902 AP000553.6-201ENST00000641242 118 ntBASIC3.16□□□□□ -1.9
HPS1Q92902 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HPS1Q92902 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.16□□□□□ -1.9
HPS1Q92902 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.15□□□□□ -1.9
HPS1Q92902 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HPS1Q92902 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
HPS1Q92902 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HPS1Q92902 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HPS1Q92902 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HPS1Q92902 MIR208A-201ENST00000362287 71 ntBASIC3.15□□□□□ -1.91
HPS1Q92902 RNU6-1072P-201ENST00000384703 107 ntBASIC3.15□□□□□ -1.91
HPS1Q92902 RNU6-443P-201ENST00000384780 107 ntBASIC3.15□□□□□ -1.91
HPS1Q92902 MIR136-201ENST00000385207 82 ntBASIC3.15□□□□□ -1.91
HPS1Q92902 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HPS1Q92902 RNU6-1086P-201ENST00000410930 100 ntBASIC3.15□□□□□ -1.91
HPS1Q92902 SNORA31.10-201ENST00000516482 106 ntBASIC3.15□□□□□ -1.91
HPS1Q92902 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.15□□□□□ -1.91
HPS1Q92902 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.15□□□□□ -1.91
HPS1Q92902 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HPS1Q92902 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.15□□□□□ -1.91
HPS1Q92902 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
HPS1Q92902 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HPS1Q92902 RNA5SP493-201ENST00000364115 91 ntBASIC3.14□□□□□ -1.91
HPS1Q92902 Y_RNA.333-201ENST00000365274 102 ntBASIC3.14□□□□□ -1.91
HPS1Q92902 Y_RNA.354-201ENST00000365448 111 ntBASIC3.14□□□□□ -1.91
HPS1Q92902 MIR218-2-201ENST00000385006 110 ntBASIC3.14□□□□□ -1.91
HPS1Q92902 MIR516B2-201ENST00000385190 85 ntBASIC3.14□□□□□ -1.91
HPS1Q92902 MIR887-201ENST00000401258 79 ntBASIC3.14□□□□□ -1.91
HPS1Q92902 ATP5A1P2-201ENST00000412323 255 ntBASIC3.14□□□□□ -1.91
HPS1Q92902 RNU6-687P-201ENST00000516443 89 ntBASIC3.14□□□□□ -1.91
HPS1Q92902 MIR8055-201ENST00000610739 97 ntBASIC3.14□□□□□ -1.91
HPS1Q92902 AC105081.1-201ENST00000617727 106 ntBASIC3.14□□□□□ -1.91
HPS1Q92902 AP001362.1-201ENST00000625165 124 ntBASIC3.14□□□□□ -1.91
HPS1Q92902 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HPS1Q92902 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.14□□□□□ -1.91
HPS1Q92902 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HPS1Q92902 HSBP1P2-201ENST00000299671 229 ntBASIC3.13□□□□□ -1.91
HPS1Q92902 Y_RNA.508-201ENST00000384502 114 ntBASIC3.13□□□□□ -1.91
HPS1Q92902 SNORA11.4-201ENST00000408823 129 ntBASIC3.13□□□□□ -1.91
HPS1Q92902 HMGN1P33-201ENST00000432945 451 ntBASIC3.13□□□□□ -1.91
HPS1Q92902 FGF7P7-201ENST00000514120 227 ntBASIC3.13□□□□□ -1.91
HPS1Q92902 RNA5SP168-201ENST00000516642 112 ntBASIC3.13□□□□□ -1.91
HPS1Q92902 SNORA31.26-201ENST00000517250 137 ntBASIC3.13□□□□□ -1.91
HPS1Q92902 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS1Q92902 MIR548AR-201ENST00000582191 57 ntBASIC3.13□□□□□ -1.91
HPS1Q92902 AC007179.3-201ENST00000604976 235 ntBASIC3.13□□□□□ -1.91
HPS1Q92902 AL512598.1-201ENST00000610158 273 ntBASIC3.13□□□□□ -1.91
HPS1Q92902 MIR8065-201ENST00000620577 100 ntBASIC3.13□□□□□ -1.91
HPS1Q92902 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HPS1Q92902 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.13□□□□□ -1.91
HPS1Q92902 AC008163.1-202ENST00000636004 2889 ntBASIC3.13□□□□□ -1.91
HPS1Q92902 SNORA25.9-201ENST00000365087 128 ntBASIC3.12□□□□□ -1.91
HPS1Q92902 RNU6-649P-201ENST00000384463 107 ntBASIC3.12□□□□□ -1.91
HPS1Q92902 AL034345.1-201ENST00000407768 123 ntBASIC3.12□□□□□ -1.91
HPS1Q92902 AC023141.11-201ENST00000508864 202 ntBASIC3.12□□□□□ -1.91
HPS1Q92902 AC104619.4-201ENST00000510773 249 ntBASIC3.12□□□□□ -1.91
HPS1Q92902 Y_RNA.681-201ENST00000516445 113 ntBASIC3.12□□□□□ -1.91
HPS1Q92902 MIR4796-201ENST00000580742 81 ntBASIC3.12□□□□□ -1.91
HPS1Q92902 MIR7851-201ENST00000610611 160 ntBASIC3.12□□□□□ -1.91
HPS1Q92902 MIR8066-201ENST00000617280 78 ntBASIC3.12□□□□□ -1.91
HPS1Q92902 MIR1297-201ENST00000637311 77 ntBASIC3.12□□□□□ -1.91
HPS1Q92902 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HPS1Q92902 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HPS1Q92902 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HPS1Q92902 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HPS1Q92902 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HPS1Q92902 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
HPS1Q92902 RNU6-161P-201ENST00000363051 106 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 SNORA68.1-201ENST00000364537 132 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 SNORA25B-201ENST00000365507 128 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 Y_RNA.537-201ENST00000384626 109 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 MIR183-201ENST00000384958 110 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 SNORD28B-201ENST00000390993 75 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 MIR1262-201ENST00000408276 93 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 snoU13.16-201ENST00000459350 104 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 RN7SL293P-201ENST00000481765 281 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 RNU7-12P-201ENST00000516030 62 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 RNU6-70P-201ENST00000516438 60 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 RNU6-807P-201ENST00000516805 107 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 MIR3169-201ENST00000578032 83 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 MIR4474-201ENST00000579189 78 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 U6.105-201ENST00000637379 88 ntBASIC3.11□□□□□ -1.91
HPS1Q92902 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 197.8 ms