Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.71□□□□□ -1.82
EFCAB3Q8N7B9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
EFCAB3Q8N7B9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
EFCAB3Q8N7B9 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.7□□□□□ -1.82
EFCAB3Q8N7B9 SNORA70.14-201ENST00000516205 110 ntBASIC3.7□□□□□ -1.82
EFCAB3Q8N7B9 SCARNA14-201ENST00000516903 136 ntBASIC3.7□□□□□ -1.82
EFCAB3Q8N7B9 RNU6-1015P-201ENST00000517121 99 ntBASIC3.7□□□□□ -1.82
EFCAB3Q8N7B9 MIR4764-201ENST00000580680 88 ntBASIC3.7□□□□□ -1.82
EFCAB3Q8N7B9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
EFCAB3Q8N7B9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
EFCAB3Q8N7B9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
EFCAB3Q8N7B9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
EFCAB3Q8N7B9 RPS29P4-201ENST00000414733 161 ntBASIC3.69□□□□□ -1.82
EFCAB3Q8N7B9 RPS29P31-201ENST00000446147 164 ntBASIC3.69□□□□□ -1.82
EFCAB3Q8N7B9 SNRPGP12-201ENST00000449481 213 ntBASIC3.69□□□□□ -1.82
EFCAB3Q8N7B9 RNU1-95P-201ENST00000516357 160 ntBASIC3.69□□□□□ -1.82
EFCAB3Q8N7B9 RNU1-128P-201ENST00000516704 160 ntBASIC3.69□□□□□ -1.82
EFCAB3Q8N7B9 RNU6-807P-201ENST00000516805 107 ntBASIC3.69□□□□□ -1.82
EFCAB3Q8N7B9 RNA5SP481-201ENST00000516814 122 ntBASIC3.69□□□□□ -1.82
EFCAB3Q8N7B9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.69□□□□□ -1.82
EFCAB3Q8N7B9 U3.45-201ENST00000607547 219 ntBASIC3.69□□□□□ -1.82
EFCAB3Q8N7B9 U7.8-201ENST00000619968 63 ntBASIC3.69□□□□□ -1.82
EFCAB3Q8N7B9 U6.98-201ENST00000637157 84 ntBASIC3.69□□□□□ -1.82
EFCAB3Q8N7B9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
EFCAB3Q8N7B9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 RNU6-161P-201ENST00000363051 106 ntBASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 SNORA5A-201ENST00000384111 134 ntBASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 MIR597-201ENST00000384968 97 ntBASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 RNU4-83P-201ENST00000410863 133 ntBASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 RNU6-448P-201ENST00000517052 107 ntBASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 MIR3126-201ENST00000577443 74 ntBASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 MIR4738-201ENST00000579134 87 ntBASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 AC022202.1-201ENST00000613515 211 ntBASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 MIR1297-201ENST00000637311 77 ntBASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
EFCAB3Q8N7B9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.67□□□□□ -1.82
EFCAB3Q8N7B9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
EFCAB3Q8N7B9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
EFCAB3Q8N7B9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.67□□□□□ -1.82
EFCAB3Q8N7B9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.67□□□□□ -1.82
EFCAB3Q8N7B9 MIR424-201ENST00000362227 98 ntBASIC3.67□□□□□ -1.82
EFCAB3Q8N7B9 SNORA38-201ENST00000363946 132 ntBASIC3.67□□□□□ -1.82
EFCAB3Q8N7B9 RNU6-283P-201ENST00000364788 107 ntBASIC3.67□□□□□ -1.82
EFCAB3Q8N7B9 snoU13.27-201ENST00000459278 104 ntBASIC3.67□□□□□ -1.82
EFCAB3Q8N7B9 AC090897.1-201ENST00000580909 226 ntBASIC3.67□□□□□ -1.82
EFCAB3Q8N7B9 AP006437.1-201ENST00000641440 3685 ntBASIC3.67□□□□□ -1.82
EFCAB3Q8N7B9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
EFCAB3Q8N7B9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.66□□□□□ -1.82
EFCAB3Q8N7B9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
EFCAB3Q8N7B9 RNU6-811P-201ENST00000384069 107 ntBASIC3.66□□□□□ -1.82
EFCAB3Q8N7B9 SNORA3.3-201ENST00000408712 125 ntBASIC3.66□□□□□ -1.82
EFCAB3Q8N7B9 AC011753.1-201ENST00000451001 220 ntBASIC3.66□□□□□ -1.82
EFCAB3Q8N7B9 AC099513.1-201ENST00000490423 301 ntBASIC3.66□□□□□ -1.82
EFCAB3Q8N7B9 Y_RNA.681-201ENST00000516445 113 ntBASIC3.66□□□□□ -1.82
EFCAB3Q8N7B9 RNA5SP437-201ENST00000517249 129 ntBASIC3.66□□□□□ -1.82
EFCAB3Q8N7B9 AC022695.1-201ENST00000522089 237 ntBASIC3.66□□□□□ -1.82
EFCAB3Q8N7B9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.66□□□□□ -1.82
EFCAB3Q8N7B9 MIR548AO-201ENST00000579992 96 ntBASIC3.66□□□□□ -1.82
EFCAB3Q8N7B9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.66□□□□□ -1.82
EFCAB3Q8N7B9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
EFCAB3Q8N7B9 RNU6-949P-201ENST00000384040 107 ntBASIC3.65□□□□□ -1.83
EFCAB3Q8N7B9 RNU6-571P-201ENST00000384128 107 ntBASIC3.65□□□□□ -1.83
EFCAB3Q8N7B9 MIR520C-201ENST00000385005 87 ntBASIC3.65□□□□□ -1.83
EFCAB3Q8N7B9 AC027119.1-201ENST00000440877 241 ntBASIC3.65□□□□□ -1.83
EFCAB3Q8N7B9 RNU6-850P-201ENST00000516934 103 ntBASIC3.65□□□□□ -1.83
EFCAB3Q8N7B9 MIR3200-201ENST00000580767 85 ntBASIC3.65□□□□□ -1.83
EFCAB3Q8N7B9 AL662814.1-201ENST00000617364 121 ntBASIC3.65□□□□□ -1.83
EFCAB3Q8N7B9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
EFCAB3Q8N7B9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
EFCAB3Q8N7B9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
EFCAB3Q8N7B9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
EFCAB3Q8N7B9 RNA5SP51-201ENST00000364750 119 ntBASIC3.64□□□□□ -1.83
EFCAB3Q8N7B9 MIR184-201ENST00000384962 84 ntBASIC3.64□□□□□ -1.83
EFCAB3Q8N7B9 RNU6-634P-201ENST00000459134 106 ntBASIC3.64□□□□□ -1.83
EFCAB3Q8N7B9 RPS27P21-201ENST00000486977 252 ntBASIC3.64□□□□□ -1.83
EFCAB3Q8N7B9 RNU6-1108P-201ENST00000516308 104 ntBASIC3.64□□□□□ -1.83
EFCAB3Q8N7B9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.64□□□□□ -1.83
EFCAB3Q8N7B9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.64□□□□□ -1.83
EFCAB3Q8N7B9 WWP1P1-201ENST00000466609 2769 ntBASIC3.63□□□□□ -1.83
EFCAB3Q8N7B9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
EFCAB3Q8N7B9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
EFCAB3Q8N7B9 SNORA72.6-201ENST00000384520 129 ntBASIC3.63□□□□□ -1.83
EFCAB3Q8N7B9 MIR199A2-201ENST00000385289 110 ntBASIC3.63□□□□□ -1.83
EFCAB3Q8N7B9 MIR1265-201ENST00000408444 86 ntBASIC3.63□□□□□ -1.83
EFCAB3Q8N7B9 RNVU1-2-201ENST00000516326 135 ntBASIC3.63□□□□□ -1.83
EFCAB3Q8N7B9 RNU6-70P-201ENST00000516438 60 ntBASIC3.63□□□□□ -1.83
EFCAB3Q8N7B9 SUB1P4-201ENST00000566062 339 ntBASIC3.63□□□□□ -1.83
EFCAB3Q8N7B9 MIR4500-201ENST00000579472 76 ntBASIC3.63□□□□□ -1.83
EFCAB3Q8N7B9 MIR8058-201ENST00000615737 89 ntBASIC3.63□□□□□ -1.83
EFCAB3Q8N7B9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.63□□□□□ -1.83
EFCAB3Q8N7B9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
EFCAB3Q8N7B9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
EFCAB3Q8N7B9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 246 ms