Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 Y_RNA.121-201ENST00000363309 113 ntBASIC1.61□□□□□ -2.15
PPP4R4Q6NUP7 RNU6-578P-201ENST00000390980 103 ntBASIC1.61□□□□□ -2.15
PPP4R4Q6NUP7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.61□□□□□ -2.15
PPP4R4Q6NUP7 RNU6-1299P-201ENST00000516316 100 ntBASIC1.61□□□□□ -2.15
PPP4R4Q6NUP7 RNU7-181P-201ENST00000517234 74 ntBASIC1.61□□□□□ -2.15
PPP4R4Q6NUP7 AL160236.1-201ENST00000556317 195 ntBASIC1.61□□□□□ -2.15
PPP4R4Q6NUP7 MIR4764-201ENST00000580680 88 ntBASIC1.61□□□□□ -2.15
PPP4R4Q6NUP7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PPP4R4Q6NUP7 Y_RNA.435-201ENST00000384095 112 ntBASIC1.6□□□□□ -2.15
PPP4R4Q6NUP7 MIR9-3-201ENST00000385084 90 ntBASIC1.6□□□□□ -2.15
PPP4R4Q6NUP7 U8.17-201ENST00000391292 132 ntBASIC1.6□□□□□ -2.15
PPP4R4Q6NUP7 RNU6-938P-201ENST00000411285 103 ntBASIC1.6□□□□□ -2.15
PPP4R4Q6NUP7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.6□□□□□ -2.15
PPP4R4Q6NUP7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
PPP4R4Q6NUP7 Y_RNA.23-201ENST00000362496 106 ntBASIC1.59□□□□□ -2.15
PPP4R4Q6NUP7 Y_RNA.412-201ENST00000384001 104 ntBASIC1.59□□□□□ -2.15
PPP4R4Q6NUP7 AC048334.1-201ENST00000477975 159 ntBASIC1.59□□□□□ -2.15
PPP4R4Q6NUP7 RPS29P11-201ENST00000496507 171 ntBASIC1.59□□□□□ -2.15
PPP4R4Q6NUP7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.59□□□□□ -2.15
PPP4R4Q6NUP7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.59□□□□□ -2.15
PPP4R4Q6NUP7 RNU7-43P-201ENST00000516554 64 ntBASIC1.59□□□□□ -2.15
PPP4R4Q6NUP7 RNU6-197P-201ENST00000516680 100 ntBASIC1.59□□□□□ -2.15
PPP4R4Q6NUP7 RNU6-365P-201ENST00000517113 106 ntBASIC1.59□□□□□ -2.15
PPP4R4Q6NUP7 RNU6-1270P-201ENST00000517128 108 ntBASIC1.59□□□□□ -2.15
PPP4R4Q6NUP7 Z83818.1-201ENST00000603584 150 ntBASIC1.59□□□□□ -2.15
PPP4R4Q6NUP7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.59□□□□□ -2.15
PPP4R4Q6NUP7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
PPP4R4Q6NUP7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.16
PPP4R4Q6NUP7 RNU6-728P-201ENST00000365375 104 ntBASIC1.58□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.552-201ENST00000384665 112 ntBASIC1.58□□□□□ -2.16
PPP4R4Q6NUP7 MIR520C-201ENST00000385005 87 ntBASIC1.58□□□□□ -2.16
PPP4R4Q6NUP7 RPL39P39-201ENST00000455840 151 ntBASIC1.58□□□□□ -2.16
PPP4R4Q6NUP7 RNU2-13P-201ENST00000515909 113 ntBASIC1.58□□□□□ -2.16
PPP4R4Q6NUP7 RNU6-138P-201ENST00000515952 107 ntBASIC1.58□□□□□ -2.16
PPP4R4Q6NUP7 RNU6-693P-201ENST00000516134 107 ntBASIC1.58□□□□□ -2.16
PPP4R4Q6NUP7 RNU6-947P-201ENST00000516264 106 ntBASIC1.58□□□□□ -2.16
PPP4R4Q6NUP7 RNU6-126P-201ENST00000516685 103 ntBASIC1.58□□□□□ -2.16
PPP4R4Q6NUP7 AC022559.1-201ENST00000520905 205 ntBASIC1.58□□□□□ -2.16
PPP4R4Q6NUP7 MIR502-201ENST00000606349 86 ntBASIC1.58□□□□□ -2.16
PPP4R4Q6NUP7 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.58□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.140-201ENST00000363474 103 ntBASIC1.57□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.297-201ENST00000364950 91 ntBASIC1.57□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.57□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.494-201ENST00000384432 111 ntBASIC1.57□□□□□ -2.16
PPP4R4Q6NUP7 AL627390.1-201ENST00000396055 340 ntBASIC1.57□□□□□ -2.16
PPP4R4Q6NUP7 RNU2-70P-201ENST00000410718 179 ntBASIC1.57□□□□□ -2.16
PPP4R4Q6NUP7 CYCSP49-201ENST00000420810 319 ntBASIC1.57□□□□□ -2.16
PPP4R4Q6NUP7 AC245047.7-201ENST00000440265 293 ntBASIC1.57□□□□□ -2.16
PPP4R4Q6NUP7 SNORA31.2-201ENST00000516019 134 ntBASIC1.57□□□□□ -2.16
PPP4R4Q6NUP7 AP003716.2-201ENST00000528260 108 ntBASIC1.57□□□□□ -2.16
PPP4R4Q6NUP7 AC019288.1-201ENST00000557918 224 ntBASIC1.57□□□□□ -2.16
PPP4R4Q6NUP7 U6.106-201ENST00000636360 105 ntBASIC1.57□□□□□ -2.16
PPP4R4Q6NUP7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.56□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.182-201ENST00000363880 111 ntBASIC1.56□□□□□ -2.16
PPP4R4Q6NUP7 SNORD115-28-201ENST00000363931 81 ntBASIC1.56□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.257-201ENST00000364596 102 ntBASIC1.56□□□□□ -2.16
PPP4R4Q6NUP7 RNU6-200P-201ENST00000364743 107 ntBASIC1.56□□□□□ -2.16
PPP4R4Q6NUP7 RNU6-275P-201ENST00000364910 107 ntBASIC1.56□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.515-201ENST00000384535 112 ntBASIC1.56□□□□□ -2.16
PPP4R4Q6NUP7 MIR570-201ENST00000384917 97 ntBASIC1.56□□□□□ -2.16
PPP4R4Q6NUP7 AL603825.1-201ENST00000438481 80 ntBASIC1.56□□□□□ -2.16
PPP4R4Q6NUP7 SNORA31.4-201ENST00000516049 129 ntBASIC1.56□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.37-201ENST00000362606 108 ntBASIC1.55□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.75-201ENST00000362927 97 ntBASIC1.55□□□□□ -2.16
PPP4R4Q6NUP7 RNU6-1020P-201ENST00000363684 107 ntBASIC1.55□□□□□ -2.16
PPP4R4Q6NUP7 RNA5SP190-201ENST00000365222 118 ntBASIC1.55□□□□□ -2.16
PPP4R4Q6NUP7 SNORA1-201ENST00000384107 130 ntBASIC1.55□□□□□ -2.16
PPP4R4Q6NUP7 RNU4-70P-201ENST00000384579 139 ntBASIC1.55□□□□□ -2.16
PPP4R4Q6NUP7 AF228730.3-201ENST00000436691 102 ntBASIC1.55□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.797-201ENST00000515977 94 ntBASIC1.55□□□□□ -2.16
PPP4R4Q6NUP7 RNU6-504P-201ENST00000516568 104 ntBASIC1.55□□□□□ -2.16
PPP4R4Q6NUP7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.55□□□□□ -2.16
PPP4R4Q6NUP7 AC008133.2-201ENST00000624540 351 ntBASIC1.55□□□□□ -2.16
PPP4R4Q6NUP7 MIR376A2-201ENST00000636782 80 ntBASIC1.55□□□□□ -2.16
PPP4R4Q6NUP7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.55□□□□□ -2.16
PPP4R4Q6NUP7 RNU1-17P-201ENST00000363022 152 ntBASIC1.54□□□□□ -2.16
PPP4R4Q6NUP7 RNU6-978P-201ENST00000364371 103 ntBASIC1.54□□□□□ -2.16
PPP4R4Q6NUP7 SNORA25-201ENST00000384384 134 ntBASIC1.54□□□□□ -2.16
PPP4R4Q6NUP7 SNORA26-201ENST00000391286 122 ntBASIC1.54□□□□□ -2.16
PPP4R4Q6NUP7 AL121914.1-201ENST00000450188 156 ntBASIC1.54□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.644-201ENST00000459006 113 ntBASIC1.54□□□□□ -2.16
PPP4R4Q6NUP7 SNORD13-201ENST00000459299 104 ntBASIC1.54□□□□□ -2.16
PPP4R4Q6NUP7 AL133373.1-201ENST00000497098 94 ntBASIC1.54□□□□□ -2.16
PPP4R4Q6NUP7 RNU6-1219P-201ENST00000516143 112 ntBASIC1.54□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.674-201ENST00000516362 113 ntBASIC1.54□□□□□ -2.16
PPP4R4Q6NUP7 SNORD36C-201ENST00000516733 66 ntBASIC1.54□□□□□ -2.16
PPP4R4Q6NUP7 AL022345.2-201ENST00000606307 135 ntBASIC1.54□□□□□ -2.16
PPP4R4Q6NUP7 AC027335.2-201ENST00000624030 375 ntBASIC1.54□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.233-201ENST00000364407 101 ntBASIC1.53□□□□□ -2.16
PPP4R4Q6NUP7 MIR1302-7-201ENST00000408841 72 ntBASIC1.53□□□□□ -2.16
PPP4R4Q6NUP7 MRPS18CP4-201ENST00000535821 231 ntBASIC1.53□□□□□ -2.16
PPP4R4Q6NUP7 AP000942.3-201ENST00000603702 160 ntBASIC1.53□□□□□ -2.16
PPP4R4Q6NUP7 PRELID3BP2-201ENST00000605362 201 ntBASIC1.53□□□□□ -2.16
PPP4R4Q6NUP7 Y_RNA.338-201ENST00000365320 114 ntBASIC1.52□□□□□ -2.17
PPP4R4Q6NUP7 MIR618-201ENST00000385287 98 ntBASIC1.52□□□□□ -2.17
PPP4R4Q6NUP7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
PPP4R4Q6NUP7 RPS26P48-201ENST00000491713 339 ntBASIC1.52□□□□□ -2.17
PPP4R4Q6NUP7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.52□□□□□ -2.17
PPP4R4Q6NUP7 SNORA70.22-201ENST00000517160 124 ntBASIC1.52□□□□□ -2.17
PPP4R4Q6NUP7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 257.2 ms