Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC004817.2-201ENST00000561794 651 ntBASIC1.23□□□□□ -2.21
LYSMD4Q5XG99 MIR2681-201ENST00000581814 105 ntBASIC1.23□□□□□ -2.21
LYSMD4Q5XG99 AC008507.4-201ENST00000585464 127 ntBASIC1.23□□□□□ -2.21
LYSMD4Q5XG99 AC022709.1-201ENST00000615967 87 ntBASIC1.23□□□□□ -2.21
LYSMD4Q5XG99 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
LYSMD4Q5XG99 SNORD41-201ENST00000386967 70 ntBASIC1.22□□□□□ -2.21
LYSMD4Q5XG99 MIR526A2-201ENST00000390198 65 ntBASIC1.22□□□□□ -2.21
LYSMD4Q5XG99 RNU6-493P-201ENST00000391321 108 ntBASIC1.22□□□□□ -2.21
LYSMD4Q5XG99 AL451046.2-201ENST00000403074 277 ntBASIC1.22□□□□□ -2.21
LYSMD4Q5XG99 SNRPGP14-201ENST00000435400 219 ntBASIC1.22□□□□□ -2.21
LYSMD4Q5XG99 RNU6-1023P-201ENST00000516137 106 ntBASIC1.22□□□□□ -2.21
LYSMD4Q5XG99 RNU7-149P-201ENST00000516739 59 ntBASIC1.22□□□□□ -2.21
LYSMD4Q5XG99 AL160236.1-201ENST00000556317 195 ntBASIC1.22□□□□□ -2.21
LYSMD4Q5XG99 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.22□□□□□ -2.21
LYSMD4Q5XG99 AC019288.1-201ENST00000557918 224 ntBASIC1.22□□□□□ -2.21
LYSMD4Q5XG99 uc_338.4-201ENST00000616635 176 ntBASIC1.22□□□□□ -2.21
LYSMD4Q5XG99 MIR6515-201ENST00000619843 57 ntBASIC1.22□□□□□ -2.21
LYSMD4Q5XG99 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
LYSMD4Q5XG99 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
LYSMD4Q5XG99 RNA5SP327-201ENST00000362494 101 ntBASIC1.21□□□□□ -2.22
LYSMD4Q5XG99 RNU6-268P-201ENST00000364174 107 ntBASIC1.21□□□□□ -2.22
LYSMD4Q5XG99 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
LYSMD4Q5XG99 AC015922.2-201ENST00000435593 184 ntBASIC1.21□□□□□ -2.22
LYSMD4Q5XG99 RNU6-561P-201ENST00000516222 102 ntBASIC1.21□□□□□ -2.22
LYSMD4Q5XG99 RNU6-1271P-201ENST00000517049 105 ntBASIC1.21□□□□□ -2.22
LYSMD4Q5XG99 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.21□□□□□ -2.22
LYSMD4Q5XG99 MIR151B-201ENST00000584249 96 ntBASIC1.21□□□□□ -2.22
LYSMD4Q5XG99 GHRLOS.1-201ENST00000610995 70 ntBASIC1.21□□□□□ -2.22
LYSMD4Q5XG99 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
LYSMD4Q5XG99 RNU6-379P-201ENST00000363813 104 ntBASIC1.2□□□□□ -2.22
LYSMD4Q5XG99 SNORD14E-201ENST00000364009 85 ntBASIC1.2□□□□□ -2.22
LYSMD4Q5XG99 SNORD58.1-201ENST00000391313 66 ntBASIC1.2□□□□□ -2.22
LYSMD4Q5XG99 Y_RNA.622-201ENST00000411091 108 ntBASIC1.2□□□□□ -2.22
LYSMD4Q5XG99 Y_RNA.626-201ENST00000411288 95 ntBASIC1.2□□□□□ -2.22
LYSMD4Q5XG99 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.2□□□□□ -2.22
LYSMD4Q5XG99 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.2□□□□□ -2.22
LYSMD4Q5XG99 RNU6-947P-201ENST00000516264 106 ntBASIC1.2□□□□□ -2.22
LYSMD4Q5XG99 RNA5SP61-201ENST00000516453 100 ntBASIC1.2□□□□□ -2.22
LYSMD4Q5XG99 Y_RNA.714-201ENST00000517065 90 ntBASIC1.2□□□□□ -2.22
LYSMD4Q5XG99 RNU6-165P-201ENST00000517170 99 ntBASIC1.2□□□□□ -2.22
LYSMD4Q5XG99 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.2□□□□□ -2.22
LYSMD4Q5XG99 AC078938.1-201ENST00000620993 318 ntBASIC1.2□□□□□ -2.22
LYSMD4Q5XG99 Y_RNA.188-201ENST00000363952 111 ntBASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 Y_RNA.486-201ENST00000384398 107 ntBASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 MIR452-201ENST00000385020 85 ntBASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 RNU6-381P-201ENST00000391259 108 ntBASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 Y_RNA.666-201ENST00000516187 112 ntBASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 RNU6-1007P-201ENST00000516586 107 ntBASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 SNORA18.7-201ENST00000516910 131 ntBASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 RNU6-388P-201ENST00000517012 105 ntBASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 RNU6-389P-201ENST00000517048 105 ntBASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 RNU6-1223P-201ENST00000517124 104 ntBASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 MIR4308-201ENST00000580634 81 ntBASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 Pinc.1-201ENST00000616452 154 ntBASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
LYSMD4Q5XG99 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
LYSMD4Q5XG99 Y_RNA.262-201ENST00000364641 102 ntBASIC1.18□□□□□ -2.22
LYSMD4Q5XG99 Y_RNA.336-201ENST00000365307 109 ntBASIC1.18□□□□□ -2.22
LYSMD4Q5XG99 MIR222-201ENST00000384992 110 ntBASIC1.18□□□□□ -2.22
LYSMD4Q5XG99 RNU6-1228P-201ENST00000391014 107 ntBASIC1.18□□□□□ -2.22
LYSMD4Q5XG99 RNA5SP496-201ENST00000391240 109 ntBASIC1.18□□□□□ -2.22
LYSMD4Q5XG99 AL606845.1-201ENST00000404881 255 ntBASIC1.18□□□□□ -2.22
LYSMD4Q5XG99 SNRPGP8-201ENST00000454064 226 ntBASIC1.18□□□□□ -2.22
LYSMD4Q5XG99 AC087343.1-201ENST00000477341 475 ntBASIC1.18□□□□□ -2.22
LYSMD4Q5XG99 SNORD77.4-201ENST00000516158 81 ntBASIC1.18□□□□□ -2.22
LYSMD4Q5XG99 AL357312.1-201ENST00000603879 298 ntBASIC1.18□□□□□ -2.22
LYSMD4Q5XG99 RNU2-4P-201ENST00000606190 192 ntBASIC1.18□□□□□ -2.22
LYSMD4Q5XG99 MIR6788-201ENST00000618842 66 ntBASIC1.18□□□□□ -2.22
LYSMD4Q5XG99 Y_RNA.354-201ENST00000365448 111 ntBASIC1.17□□□□□ -2.22
LYSMD4Q5XG99 Y_RNA.401-201ENST00000383965 117 ntBASIC1.17□□□□□ -2.22
LYSMD4Q5XG99 RNU6-442P-201ENST00000383968 104 ntBASIC1.17□□□□□ -2.22
LYSMD4Q5XG99 Y_RNA.478-201ENST00000384358 107 ntBASIC1.17□□□□□ -2.22
LYSMD4Q5XG99 MIR570-201ENST00000384917 97 ntBASIC1.17□□□□□ -2.22
LYSMD4Q5XG99 MIR802-201ENST00000390235 94 ntBASIC1.17□□□□□ -2.22
LYSMD4Q5XG99 SNORD28B-201ENST00000390993 75 ntBASIC1.17□□□□□ -2.22
LYSMD4Q5XG99 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.17□□□□□ -2.22
LYSMD4Q5XG99 snoU13.25-201ENST00000458945 104 ntBASIC1.17□□□□□ -2.22
LYSMD4Q5XG99 RN7SKP164-201ENST00000516138 266 ntBASIC1.17□□□□□ -2.22
LYSMD4Q5XG99 AC130289.1-201ENST00000577321 73 ntBASIC1.17□□□□□ -2.22
LYSMD4Q5XG99 Y_RNA.91-201ENST00000363042 107 ntBASIC1.16□□□□□ -2.22
LYSMD4Q5XG99 RNU4-17P-201ENST00000365598 141 ntBASIC1.16□□□□□ -2.22
LYSMD4Q5XG99 RNU6-47P-201ENST00000383866 107 ntBASIC1.16□□□□□ -2.22
LYSMD4Q5XG99 MIR136-201ENST00000385207 82 ntBASIC1.16□□□□□ -2.22
LYSMD4Q5XG99 RNU7-25P-201ENST00000516544 62 ntBASIC1.16□□□□□ -2.22
LYSMD4Q5XG99 RNU7-181P-201ENST00000517234 74 ntBASIC1.16□□□□□ -2.22
LYSMD4Q5XG99 AC007751.1-201ENST00000529260 376 ntBASIC1.16□□□□□ -2.22
LYSMD4Q5XG99 MIR3192-201ENST00000584920 77 ntBASIC1.16□□□□□ -2.22
LYSMD4Q5XG99 AC015726.2-201ENST00000620112 122 ntBASIC1.16□□□□□ -2.22
LYSMD4Q5XG99 MIR6767-201ENST00000637302 66 ntBASIC1.16□□□□□ -2.22
LYSMD4Q5XG99 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
LYSMD4Q5XG99 Y_RNA.199-201ENST00000364014 102 ntBASIC1.15□□□□□ -2.23
LYSMD4Q5XG99 Y_RNA.274-201ENST00000364714 101 ntBASIC1.15□□□□□ -2.23
LYSMD4Q5XG99 MIR616-201ENST00000385293 97 ntBASIC1.15□□□□□ -2.23
LYSMD4Q5XG99 MIR548J-201ENST00000408833 112 ntBASIC1.15□□□□□ -2.23
LYSMD4Q5XG99 HMGN2P32-201ENST00000444648 269 ntBASIC1.15□□□□□ -2.23
LYSMD4Q5XG99 AC023449.1-201ENST00000454464 154 ntBASIC1.15□□□□□ -2.23
LYSMD4Q5XG99 RPL39P39-201ENST00000455840 151 ntBASIC1.15□□□□□ -2.23
LYSMD4Q5XG99 AL133373.1-201ENST00000497098 94 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms