Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 MIR203B-201ENST00000636080 86 ntBASIC3.18□□□□□ -1.9
RNF20Q5VTR2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNF20Q5VTR2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RNF20Q5VTR2 MIR494-201ENST00000349529 81 ntBASIC3.17□□□□□ -1.9
RNF20Q5VTR2 SNORD56.5-201ENST00000364281 72 ntBASIC3.17□□□□□ -1.9
RNF20Q5VTR2 RNU1-109P-201ENST00000383960 147 ntBASIC3.17□□□□□ -1.9
RNF20Q5VTR2 MIR516B2-201ENST00000385190 85 ntBASIC3.17□□□□□ -1.9
RNF20Q5VTR2 RNA5SP168-201ENST00000516642 112 ntBASIC3.17□□□□□ -1.9
RNF20Q5VTR2 AC026421.1-201ENST00000519101 163 ntBASIC3.17□□□□□ -1.9
RNF20Q5VTR2 AC079600.2-201ENST00000550076 130 ntBASIC3.17□□□□□ -1.9
RNF20Q5VTR2 ELOCP29-201ENST00000588193 334 ntBASIC3.17□□□□□ -1.9
RNF20Q5VTR2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF20Q5VTR2 MIR1245B-201ENST00000636115 69 ntBASIC3.17□□□□□ -1.9
RNF20Q5VTR2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF20Q5VTR2 MIR597-201ENST00000384968 97 ntBASIC3.16□□□□□ -1.9
RNF20Q5VTR2 MIR450A2-201ENST00000385022 100 ntBASIC3.16□□□□□ -1.9
RNF20Q5VTR2 RNU6-592P-201ENST00000411333 103 ntBASIC3.16□□□□□ -1.9
RNF20Q5VTR2 POLR2J4-204ENST00000418424 324 ntBASIC3.16□□□□□ -1.9
RNF20Q5VTR2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.16□□□□□ -1.9
RNF20Q5VTR2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF20Q5VTR2 RNU7-12P-201ENST00000516030 62 ntBASIC3.16□□□□□ -1.9
RNF20Q5VTR2 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.16□□□□□ -1.9
RNF20Q5VTR2 MIR3126-201ENST00000577443 74 ntBASIC3.16□□□□□ -1.9
RNF20Q5VTR2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RNF20Q5VTR2 Y_RNA.171-201ENST00000363760 102 ntBASIC3.15□□□□□ -1.91
RNF20Q5VTR2 SNORA4.2-201ENST00000365313 147 ntBASIC3.15□□□□□ -1.91
RNF20Q5VTR2 AL034345.1-201ENST00000407768 123 ntBASIC3.15□□□□□ -1.91
RNF20Q5VTR2 Y_RNA.601-201ENST00000410500 113 ntBASIC3.15□□□□□ -1.91
RNF20Q5VTR2 RNU7-26P-201ENST00000458980 63 ntBASIC3.15□□□□□ -1.91
RNF20Q5VTR2 UBL5P3-201ENST00000475112 231 ntBASIC3.15□□□□□ -1.91
RNF20Q5VTR2 FAM71BP1-201ENST00000604431 523 ntBASIC3.15□□□□□ -1.91
RNF20Q5VTR2 AL590808.1-201ENST00000618696 141 ntBASIC3.15□□□□□ -1.91
RNF20Q5VTR2 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.15□□□□□ -1.91
RNF20Q5VTR2 AC064859.1-201ENST00000624741 174 ntBASIC3.15□□□□□ -1.91
RNF20Q5VTR2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.15□□□□□ -1.91
RNF20Q5VTR2 RNU6-661P-201ENST00000362409 107 ntBASIC3.14□□□□□ -1.91
RNF20Q5VTR2 MIR605-201ENST00000385078 83 ntBASIC3.14□□□□□ -1.91
RNF20Q5VTR2 MIR29C-201ENST00000385231 88 ntBASIC3.14□□□□□ -1.91
RNF20Q5VTR2 RNU11-3P-201ENST00000391111 133 ntBASIC3.14□□□□□ -1.91
RNF20Q5VTR2 RN7SKP192-201ENST00000411291 327 ntBASIC3.14□□□□□ -1.91
RNF20Q5VTR2 RNU6-893P-201ENST00000458841 100 ntBASIC3.14□□□□□ -1.91
RNF20Q5VTR2 RNU6-795P-201ENST00000516323 103 ntBASIC3.14□□□□□ -1.91
RNF20Q5VTR2 AP003327.1-201ENST00000529684 127 ntBASIC3.14□□□□□ -1.91
RNF20Q5VTR2 AC007336.1-201ENST00000576365 3828 ntBASIC3.14□□□□□ -1.91
RNF20Q5VTR2 AC103810.6-201ENST00000606708 136 ntBASIC3.14□□□□□ -1.91
RNF20Q5VTR2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF20Q5VTR2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RNF20Q5VTR2 RNU6-833P-201ENST00000363486 107 ntBASIC3.13□□□□□ -1.91
RNF20Q5VTR2 RNU4-67P-201ENST00000364569 141 ntBASIC3.13□□□□□ -1.91
RNF20Q5VTR2 RNU6-409P-201ENST00000384114 104 ntBASIC3.13□□□□□ -1.91
RNF20Q5VTR2 Y_RNA.466-201ENST00000384294 113 ntBASIC3.13□□□□□ -1.91
RNF20Q5VTR2 MIR577-201ENST00000385196 96 ntBASIC3.13□□□□□ -1.91
RNF20Q5VTR2 RNU6-733P-201ENST00000410759 104 ntBASIC3.13□□□□□ -1.91
RNF20Q5VTR2 RNU7-113P-201ENST00000459273 62 ntBASIC3.13□□□□□ -1.91
RNF20Q5VTR2 RNU7-61P-201ENST00000515897 61 ntBASIC3.13□□□□□ -1.91
RNF20Q5VTR2 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.13□□□□□ -1.91
RNF20Q5VTR2 RNU6-1258P-201ENST00000516911 111 ntBASIC3.13□□□□□ -1.91
RNF20Q5VTR2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF20Q5VTR2 AP000648.3-201ENST00000623539 4507 ntBASIC3.12□□□□□ -1.91
RNF20Q5VTR2 RNU6-363P-201ENST00000362895 105 ntBASIC3.12□□□□□ -1.91
RNF20Q5VTR2 SNORD115-19-201ENST00000363098 82 ntBASIC3.12□□□□□ -1.91
RNF20Q5VTR2 RNY1P10-201ENST00000363268 113 ntBASIC3.12□□□□□ -1.91
RNF20Q5VTR2 SNORD115-18-201ENST00000363293 82 ntBASIC3.12□□□□□ -1.91
RNF20Q5VTR2 SNORD115-17-201ENST00000364612 82 ntBASIC3.12□□□□□ -1.91
RNF20Q5VTR2 Y_RNA.360-201ENST00000365512 102 ntBASIC3.12□□□□□ -1.91
RNF20Q5VTR2 RNU6-820P-201ENST00000384273 107 ntBASIC3.12□□□□□ -1.91
RNF20Q5VTR2 AC093850.1-201ENST00000454121 251 ntBASIC3.12□□□□□ -1.91
RNF20Q5VTR2 RNU6-162P-201ENST00000516228 103 ntBASIC3.12□□□□□ -1.91
RNF20Q5VTR2 RNU6-958P-201ENST00000516995 106 ntBASIC3.12□□□□□ -1.91
RNF20Q5VTR2 MIR5092-201ENST00000583139 88 ntBASIC3.12□□□□□ -1.91
RNF20Q5VTR2 AC012531.4-201ENST00000616509 177 ntBASIC3.12□□□□□ -1.91
RNF20Q5VTR2 RNU6-859P-201ENST00000362728 107 ntBASIC3.11□□□□□ -1.91
RNF20Q5VTR2 Y_RNA.290-201ENST00000364879 114 ntBASIC3.11□□□□□ -1.91
RNF20Q5VTR2 Y_RNA.370-201ENST00000365589 108 ntBASIC3.11□□□□□ -1.91
RNF20Q5VTR2 MIR483-201ENST00000385070 76 ntBASIC3.11□□□□□ -1.91
RNF20Q5VTR2 RNA5SP210-201ENST00000391034 120 ntBASIC3.11□□□□□ -1.91
RNF20Q5VTR2 RNU6-644P-201ENST00000391155 98 ntBASIC3.11□□□□□ -1.91
RNF20Q5VTR2 SNORA7.5-201ENST00000410672 110 ntBASIC3.11□□□□□ -1.91
RNF20Q5VTR2 HMGN2P35-201ENST00000412164 270 ntBASIC3.11□□□□□ -1.91
RNF20Q5VTR2 RNU7-67P-201ENST00000459003 62 ntBASIC3.11□□□□□ -1.91
RNF20Q5VTR2 RNA5SP282-201ENST00000516355 108 ntBASIC3.11□□□□□ -1.91
RNF20Q5VTR2 MIR4694-201ENST00000578534 80 ntBASIC3.11□□□□□ -1.91
RNF20Q5VTR2 AC010297.1-201ENST00000623948 149 ntBASIC3.11□□□□□ -1.91
RNF20Q5VTR2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RNF20Q5VTR2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF20Q5VTR2 Y_RNA.10-201ENST00000362371 110 ntBASIC3.1□□□□□ -1.91
RNF20Q5VTR2 RNU6-832P-201ENST00000363319 107 ntBASIC3.1□□□□□ -1.91
RNF20Q5VTR2 SNORA38-201ENST00000363946 132 ntBASIC3.1□□□□□ -1.91
RNF20Q5VTR2 DEFA7P-201ENST00000382676 285 ntBASIC3.1□□□□□ -1.91
RNF20Q5VTR2 RNU4-69P-201ENST00000410677 143 ntBASIC3.1□□□□□ -1.91
RNF20Q5VTR2 AC069257.2-201ENST00000441819 155 ntBASIC3.1□□□□□ -1.91
RNF20Q5VTR2 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.1□□□□□ -1.91
RNF20Q5VTR2 MIR548Z-201ENST00000584743 97 ntBASIC3.1□□□□□ -1.91
RNF20Q5VTR2 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.1□□□□□ -1.91
RNF20Q5VTR2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.1□□□□□ -1.91
RNF20Q5VTR2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.1□□□□□ -1.91
RNF20Q5VTR2 Y_RNA.299-201ENST00000364973 94 ntBASIC3.09□□□□□ -1.91
RNF20Q5VTR2 RNU1-148P-201ENST00000384472 162 ntBASIC3.09□□□□□ -1.91
RNF20Q5VTR2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RNF20Q5VTR2 COTL1P1-201ENST00000422309 375 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 243.1 ms