Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RPS29P24-201ENST00000486345 171 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 AP003072.1-201ENST00000531740 145 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 MIR4491-201ENST00000581087 68 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 AC124312.5-201ENST00000604451 268 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 AL133255.1-201ENST00000606374 441 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 MIR6128-201ENST00000615528 109 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 AP001282.2-201ENST00000616149 309 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 MIR6863-201ENST00000636112 90 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 RNU6-674P-201ENST00000363831 107 ntBASIC-1.09□□□□□ -2.58
TPM4P67936 RNU4-50P-201ENST00000364361 141 ntBASIC-1.09□□□□□ -2.58
TPM4P67936 RNU6-726P-201ENST00000364680 107 ntBASIC-1.09□□□□□ -2.58
TPM4P67936 SNORA22B-201ENST00000383876 138 ntBASIC-1.09□□□□□ -2.58
TPM4P67936 RNU6-926P-201ENST00000384075 107 ntBASIC-1.09□□□□□ -2.58
TPM4P67936 SNORA27-201ENST00000384323 126 ntBASIC-1.09□□□□□ -2.58
TPM4P67936 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.09□□□□□ -2.58
TPM4P67936 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.09□□□□□ -2.58
TPM4P67936 AC024933.1-201ENST00000608472 348 ntBASIC-1.09□□□□□ -2.58
TPM4P67936 AL662814.1-201ENST00000617364 121 ntBASIC-1.09□□□□□ -2.58
TPM4P67936 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.1□□□□□ -2.59
TPM4P67936 Y_RNA.412-201ENST00000384001 104 ntBASIC-1.1□□□□□ -2.59
TPM4P67936 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
TPM4P67936 AL590004.1-201ENST00000405321 300 ntBASIC-1.1□□□□□ -2.59
TPM4P67936 HMGN2P22-201ENST00000427588 175 ntBASIC-1.1□□□□□ -2.59
TPM4P67936 RNU6-956P-201ENST00000458868 103 ntBASIC-1.1□□□□□ -2.59
TPM4P67936 RNU6-470P-201ENST00000515954 104 ntBASIC-1.1□□□□□ -2.59
TPM4P67936 AL512360.1-201ENST00000555346 234 ntBASIC-1.1□□□□□ -2.59
TPM4P67936 AL596211.1-201ENST00000569873 2277 ntBASIC-1.11□□□□□ -2.59
TPM4P67936 SNORD115-28-201ENST00000363931 81 ntBASIC-1.11□□□□□ -2.59
TPM4P67936 RNA5SP205-201ENST00000364653 136 ntBASIC-1.11□□□□□ -2.59
TPM4P67936 RNU6-20P-201ENST00000384106 107 ntBASIC-1.11□□□□□ -2.59
TPM4P67936 AF228730.4-201ENST00000421457 183 ntBASIC-1.11□□□□□ -2.59
TPM4P67936 FCF1P4-201ENST00000448326 183 ntBASIC-1.11□□□□□ -2.59
TPM4P67936 RPL7P42-201ENST00000481005 679 ntBASIC-1.11□□□□□ -2.59
TPM4P67936 AL162413.1-201ENST00000603198 110 ntBASIC-1.11□□□□□ -2.59
TPM4P67936 AL080274.1-201ENST00000605565 220 ntBASIC-1.11□□□□□ -2.59
TPM4P67936 AC073114.1-201ENST00000612027 490 ntBASIC-1.11□□□□□ -2.59
TPM4P67936 Y_RNA.185-201ENST00000363894 100 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 SNORD116-9-201ENST00000384000 95 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 SNORD116-3-201ENST00000384287 95 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 SNORD116-8-201ENST00000384365 95 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 SNORD116-7-201ENST00000384404 95 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 SNORD116-5-201ENST00000384462 95 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 SNORA72.6-201ENST00000384520 129 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 MIR548I3-201ENST00000408378 149 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 RNU6-908P-201ENST00000410160 94 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 RNA5SP237-201ENST00000410414 113 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 RNU6-938P-201ENST00000411285 103 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 AC074085.1-201ENST00000413598 418 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 RPL30P15-201ENST00000457129 321 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 RNU6-864P-201ENST00000516256 108 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 AC022441.3-201ENST00000605737 136 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 uc_338.28-201ENST00000612082 187 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.12□□□□□ -2.59
TPM4P67936 MIR6507-201ENST00000613630 70 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 MIR3662-201ENST00000637030 95 ntBASIC-1.12□□□□□ -2.59
TPM4P67936 RNU6-626P-201ENST00000363354 107 ntBASIC-1.13□□□□□ -2.59
TPM4P67936 RNU6-332P-201ENST00000391193 108 ntBASIC-1.13□□□□□ -2.59
TPM4P67936 MIR876-201ENST00000401147 81 ntBASIC-1.13□□□□□ -2.59
TPM4P67936 MTND4LP11-201ENST00000422184 280 ntBASIC-1.13□□□□□ -2.59
TPM4P67936 AC098826.2-201ENST00000452011 651 ntBASIC-1.13□□□□□ -2.59
TPM4P67936 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.13□□□□□ -2.59
TPM4P67936 RNU6-273P-201ENST00000516937 96 ntBASIC-1.13□□□□□ -2.59
TPM4P67936 AC007751.1-201ENST00000529260 376 ntBASIC-1.13□□□□□ -2.59
TPM4P67936 AL359880.1-201ENST00000621879 266 ntBASIC-1.13□□□□□ -2.59
TPM4P67936 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-1.13□□□□□ -2.59
TPM4P67936 SNORD115-24-201ENST00000363528 82 ntBASIC-1.14□□□□□ -2.59
TPM4P67936 AC096949.1-201ENST00000412047 152 ntBASIC-1.14□□□□□ -2.59
TPM4P67936 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.14□□□□□ -2.59
TPM4P67936 NBR2-204ENST00000587322 63 ntBASIC-1.14□□□□□ -2.59
TPM4P67936 AC093424.1-201ENST00000604999 338 ntBASIC-1.14□□□□□ -2.59
TPM4P67936 RNU4-84P-201ENST00000364200 139 ntBASIC-1.15□□□□□ -2.59
TPM4P67936 SNORA25.7-201ENST00000364375 127 ntBASIC-1.15□□□□□ -2.59
TPM4P67936 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.15□□□□□ -2.59
TPM4P67936 SNORD77.3-201ENST00000391113 65 ntBASIC-1.15□□□□□ -2.59
TPM4P67936 MTND4P28-201ENST00000426217 387 ntBASIC-1.15□□□□□ -2.59
TPM4P67936 AC091951.2-201ENST00000500762 203 ntBASIC-1.15□□□□□ -2.59
TPM4P67936 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.15□□□□□ -2.59
TPM4P67936 MTND3P12-201ENST00000559068 328 ntBASIC-1.15□□□□□ -2.59
TPM4P67936 NAMPTP3-201ENST00000569273 224 ntBASIC-1.15□□□□□ -2.59
TPM4P67936 MIR4436A-201ENST00000585278 85 ntBASIC-1.15□□□□□ -2.59
TPM4P67936 RNU6-451P-201ENST00000362921 107 ntBASIC-1.16□□□□□ -2.6
TPM4P67936 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.16□□□□□ -2.6
TPM4P67936 MIR548L-201ENST00000408303 86 ntBASIC-1.16□□□□□ -2.6
TPM4P67936 SNORA36B-201ENST00000410438 131 ntBASIC-1.16□□□□□ -2.6
TPM4P67936 RNU6-566P-201ENST00000516790 107 ntBASIC-1.16□□□□□ -2.6
TPM4P67936 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.16□□□□□ -2.6
TPM4P67936 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.16□□□□□ -2.6
TPM4P67936 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.16□□□□□ -2.6
TPM4P67936 AC073869.9-201ENST00000641610 120 ntBASIC-1.16□□□□□ -2.6
TPM4P67936 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.17□□□□□ -2.6
TPM4P67936 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.17□□□□□ -2.6
TPM4P67936 AC108059.2-201ENST00000434626 151 ntBASIC-1.17□□□□□ -2.6
TPM4P67936 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.17□□□□□ -2.6
TPM4P67936 AC022140.2-201ENST00000623500 188 ntBASIC-1.17□□□□□ -2.6
TPM4P67936 MIR6759-201ENST00000638110 65 ntBASIC-1.17□□□□□ -2.6
TPM4P67936 RNA5SP245-201ENST00000364239 121 ntBASIC-1.18□□□□□ -2.6
TPM4P67936 SNORA1-201ENST00000384107 130 ntBASIC-1.18□□□□□ -2.6
TPM4P67936 MTND1P2-201ENST00000430604 821 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms