Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 RNU6-163P-201ENST00000384396 106 ntBASIC1.95□□□□□ -2.1
NPTX2P47972 MIR30A-201ENST00000385092 71 ntBASIC1.95□□□□□ -2.1
NPTX2P47972 Y_RNA.586-201ENST00000391146 98 ntBASIC1.95□□□□□ -2.1
NPTX2P47972 RNU6-257P-201ENST00000410238 98 ntBASIC1.95□□□□□ -2.1
NPTX2P47972 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.95□□□□□ -2.1
NPTX2P47972 SNRPGP13-201ENST00000442212 177 ntBASIC1.95□□□□□ -2.1
NPTX2P47972 snoU13.27-201ENST00000459278 104 ntBASIC1.95□□□□□ -2.1
NPTX2P47972 RNA5SP168-201ENST00000516642 112 ntBASIC1.95□□□□□ -2.1
NPTX2P47972 MIR4419B-201ENST00000577260 68 ntBASIC1.95□□□□□ -2.1
NPTX2P47972 MIR4709-201ENST00000577272 72 ntBASIC1.95□□□□□ -2.1
NPTX2P47972 AL365205.2-201ENST00000594586 68 ntBASIC1.95□□□□□ -2.1
NPTX2P47972 AC021506.2-201ENST00000612354 169 ntBASIC1.95□□□□□ -2.1
NPTX2P47972 AC091895.1-201ENST00000624494 256 ntBASIC1.95□□□□□ -2.1
NPTX2P47972 RNU6-81P-201ENST00000365608 104 ntBASIC1.94□□□□□ -2.1
NPTX2P47972 MIR518F-201ENST00000384973 87 ntBASIC1.94□□□□□ -2.1
NPTX2P47972 RNU6-460P-201ENST00000391158 108 ntBASIC1.94□□□□□ -2.1
NPTX2P47972 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.94□□□□□ -2.1
NPTX2P47972 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.94□□□□□ -2.1
NPTX2P47972 HMGN2P32-201ENST00000444648 269 ntBASIC1.94□□□□□ -2.1
NPTX2P47972 AC099513.1-201ENST00000490423 301 ntBASIC1.94□□□□□ -2.1
NPTX2P47972 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.94□□□□□ -2.1
NPTX2P47972 RNU6-693P-201ENST00000516134 107 ntBASIC1.94□□□□□ -2.1
NPTX2P47972 AC090142.3-201ENST00000519012 385 ntBASIC1.94□□□□□ -2.1
NPTX2P47972 AC027279.3-201ENST00000625055 122 ntBASIC1.94□□□□□ -2.1
NPTX2P47972 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
NPTX2P47972 SNORD113-1-201ENST00000365321 69 ntBASIC1.93□□□□□ -2.1
NPTX2P47972 MIR548O-201ENST00000408583 114 ntBASIC1.93□□□□□ -2.1
NPTX2P47972 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
NPTX2P47972 MIR3129-201ENST00000581095 76 ntBASIC1.93□□□□□ -2.1
NPTX2P47972 AC104984.5-201ENST00000586878 94 ntBASIC1.93□□□□□ -2.1
NPTX2P47972 AC012493.3-201ENST00000604494 112 ntBASIC1.93□□□□□ -2.1
NPTX2P47972 MIR8081-201ENST00000611533 95 ntBASIC1.93□□□□□ -2.1
NPTX2P47972 ICE2P2-201ENST00000483823 2787 ntBASIC1.93□□□□□ -2.1
NPTX2P47972 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NPTX2P47972 Y_RNA.542-201ENST00000384641 111 ntBASIC1.92□□□□□ -2.1
NPTX2P47972 SNORA40-201ENST00000388090 126 ntBASIC1.92□□□□□ -2.1
NPTX2P47972 RNA5SP127-201ENST00000411051 133 ntBASIC1.92□□□□□ -2.1
NPTX2P47972 MTND4LP9-201ENST00000427694 174 ntBASIC1.92□□□□□ -2.1
NPTX2P47972 snoU13.23-201ENST00000458863 104 ntBASIC1.92□□□□□ -2.1
NPTX2P47972 RNU7-25P-201ENST00000516544 62 ntBASIC1.92□□□□□ -2.1
NPTX2P47972 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.92□□□□□ -2.1
NPTX2P47972 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.92□□□□□ -2.1
NPTX2P47972 RNU6-833P-201ENST00000363486 107 ntBASIC1.91□□□□□ -2.1
NPTX2P47972 MIR624-201ENST00000385217 97 ntBASIC1.91□□□□□ -2.1
NPTX2P47972 Y_RNA.584-201ENST00000391090 114 ntBASIC1.91□□□□□ -2.1
NPTX2P47972 MIR934-201ENST00000401241 83 ntBASIC1.91□□□□□ -2.1
NPTX2P47972 HMGN2P23-201ENST00000456759 269 ntBASIC1.91□□□□□ -2.1
NPTX2P47972 SNORA18.4-201ENST00000516440 124 ntBASIC1.91□□□□□ -2.1
NPTX2P47972 MIR8074-201ENST00000615081 81 ntBASIC1.91□□□□□ -2.1
NPTX2P47972 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.91□□□□□ -2.1
NPTX2P47972 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
NPTX2P47972 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
NPTX2P47972 Y_RNA.547-201ENST00000384654 119 ntBASIC1.9□□□□□ -2.11
NPTX2P47972 AL627390.1-201ENST00000396055 340 ntBASIC1.9□□□□□ -2.11
NPTX2P47972 MIR891A-201ENST00000401237 79 ntBASIC1.9□□□□□ -2.11
NPTX2P47972 AL606753.1-201ENST00000427435 87 ntBASIC1.9□□□□□ -2.11
NPTX2P47972 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
NPTX2P47972 RNU7-12P-201ENST00000516030 62 ntBASIC1.9□□□□□ -2.11
NPTX2P47972 AC131055.1-201ENST00000584626 316 ntBASIC1.9□□□□□ -2.11
NPTX2P47972 AL513423.1-201ENST00000621695 132 ntBASIC1.9□□□□□ -2.11
NPTX2P47972 SNORD48-201ENST00000364953 64 ntBASIC1.89□□□□□ -2.11
NPTX2P47972 RNU6-1292P-201ENST00000383856 107 ntBASIC1.89□□□□□ -2.11
NPTX2P47972 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
NPTX2P47972 RNU6-360P-201ENST00000390944 104 ntBASIC1.89□□□□□ -2.11
NPTX2P47972 SNORD77.3-201ENST00000391113 65 ntBASIC1.89□□□□□ -2.11
NPTX2P47972 AF228730.3-201ENST00000436691 102 ntBASIC1.89□□□□□ -2.11
NPTX2P47972 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.89□□□□□ -2.11
NPTX2P47972 AP001328.1-201ENST00000528550 176 ntBASIC1.89□□□□□ -2.11
NPTX2P47972 AC015712.3-201ENST00000559380 164 ntBASIC1.89□□□□□ -2.11
NPTX2P47972 DEFB122-202ENST00000569013 197 ntBASIC1.89□□□□□ -2.11
NPTX2P47972 MIR3683-201ENST00000580847 82 ntBASIC1.89□□□□□ -2.11
NPTX2P47972 AC015726.2-201ENST00000620112 122 ntBASIC1.89□□□□□ -2.11
NPTX2P47972 AP001340.1-201ENST00000624405 217 ntBASIC1.89□□□□□ -2.11
NPTX2P47972 Y_RNA.52-201ENST00000362760 96 ntBASIC1.88□□□□□ -2.11
NPTX2P47972 U8.1-201ENST00000362843 134 ntBASIC1.88□□□□□ -2.11
NPTX2P47972 RNU6-414P-201ENST00000363705 104 ntBASIC1.88□□□□□ -2.11
NPTX2P47972 RNU6-915P-201ENST00000364943 103 ntBASIC1.88□□□□□ -2.11
NPTX2P47972 MIR660-201ENST00000385235 97 ntBASIC1.88□□□□□ -2.11
NPTX2P47972 RPL31P63-201ENST00000422565 375 ntBASIC1.88□□□□□ -2.11
NPTX2P47972 PGBD4P5-201ENST00000445958 426 ntBASIC1.88□□□□□ -2.11
NPTX2P47972 AC093850.1-201ENST00000454121 251 ntBASIC1.88□□□□□ -2.11
NPTX2P47972 RNU6-548P-201ENST00000517083 115 ntBASIC1.88□□□□□ -2.11
NPTX2P47972 MIR4255-201ENST00000579351 72 ntBASIC1.88□□□□□ -2.11
NPTX2P47972 MIR3618-201ENST00000580330 88 ntBASIC1.88□□□□□ -2.11
NPTX2P47972 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.88□□□□□ -2.11
NPTX2P47972 MIR376A2-201ENST00000636782 80 ntBASIC1.88□□□□□ -2.11
NPTX2P47972 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NPTX2P47972 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NPTX2P47972 SNORD115-28-201ENST00000363931 81 ntBASIC1.87□□□□□ -2.11
NPTX2P47972 RNU6-439P-201ENST00000384188 106 ntBASIC1.87□□□□□ -2.11
NPTX2P47972 SNORD38C-201ENST00000384381 69 ntBASIC1.87□□□□□ -2.11
NPTX2P47972 RNU6-959P-201ENST00000384671 107 ntBASIC1.87□□□□□ -2.11
NPTX2P47972 AC015922.2-201ENST00000435593 184 ntBASIC1.87□□□□□ -2.11
NPTX2P47972 SNORA25.15-201ENST00000516487 89 ntBASIC1.87□□□□□ -2.11
NPTX2P47972 Y_RNA.686-201ENST00000516548 134 ntBASIC1.87□□□□□ -2.11
NPTX2P47972 RNU2-60P-201ENST00000517290 128 ntBASIC1.87□□□□□ -2.11
NPTX2P47972 MIR4778-201ENST00000577635 80 ntBASIC1.87□□□□□ -2.11
NPTX2P47972 AC134878.1-201ENST00000619901 243 ntBASIC1.87□□□□□ -2.11
NPTX2P47972 AL442644.1-201ENST00000454390 3105 ntBASIC1.86□□□□□ -2.11
NPTX2P47972 MIR424-201ENST00000362227 98 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 237.4 ms