Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 SNORA72.4-201ENST00000384174 132 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 MT-TT-201ENST00000387460 66 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 MTCO2P12-201ENST00000427426 682 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 RNU6-1338P-201ENST00000516328 91 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 RNU6-1046P-201ENST00000516538 107 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 AC136932.1-201ENST00000574771 208 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 MIR548AY-201ENST00000617669 107 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
SCN4AP35499 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.44□□□□□ -2.34
SCN4AP35499 Y_RNA.60-201ENST00000362831 98 ntBASIC0.44□□□□□ -2.34
SCN4AP35499 RNU6-1283P-201ENST00000365314 105 ntBASIC0.44□□□□□ -2.34
SCN4AP35499 RNU6-364P-201ENST00000384387 107 ntBASIC0.44□□□□□ -2.34
SCN4AP35499 Y_RNA.494-201ENST00000384432 111 ntBASIC0.44□□□□□ -2.34
SCN4AP35499 SNORD105-201ENST00000386910 85 ntBASIC0.44□□□□□ -2.34
SCN4AP35499 SNORD41-201ENST00000386967 70 ntBASIC0.44□□□□□ -2.34
SCN4AP35499 SNORD115-46-201ENST00000390982 71 ntBASIC0.44□□□□□ -2.34
SCN4AP35499 RNU6-613P-201ENST00000410412 108 ntBASIC0.44□□□□□ -2.34
SCN4AP35499 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.44□□□□□ -2.34
SCN4AP35499 COX6CP6-201ENST00000490840 228 ntBASIC0.44□□□□□ -2.34
SCN4AP35499 Y_RNA.661-201ENST00000516003 99 ntBASIC0.44□□□□□ -2.34
SCN4AP35499 RNU4-77P-201ENST00000516692 156 ntBASIC0.44□□□□□ -2.34
SCN4AP35499 MIR4795-201ENST00000584182 89 ntBASIC0.44□□□□□ -2.34
SCN4AP35499 Z83818.1-201ENST00000603584 150 ntBASIC0.44□□□□□ -2.34
SCN4AP35499 MIR6718-201ENST00000616153 80 ntBASIC0.44□□□□□ -2.34
SCN4AP35499 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.43□□□□□ -2.34
SCN4AP35499 Y_RNA.70-201ENST00000362886 110 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 Y_RNA.128-201ENST00000363391 112 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 RNU6-867P-201ENST00000364956 107 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 Y_RNA.303-201ENST00000364998 94 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 Y_RNA.419-201ENST00000384041 102 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 SNORA24-201ENST00000384096 131 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 MT-TD-201ENST00000387419 68 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 SNORD28B-201ENST00000390993 75 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 RNU6-847P-201ENST00000411115 108 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 RNU7-56P-201ENST00000458744 62 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 RNU6-958P-201ENST00000516995 106 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 RPS29P30-201ENST00000600975 111 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 MIR4791-201ENST00000607666 84 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 AC134503.1-201ENST00000633048 54 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 MIR4251-201ENST00000635819 61 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 RNU6-899P-201ENST00000363947 107 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 Y_RNA.263-201ENST00000364659 114 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 RNU6-823P-201ENST00000391042 103 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.43□□□□□ -2.34
SCN4AP35499 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.43□□□□□ -2.34
SCN4AP35499 HMGN2P32-201ENST00000444648 269 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 RNU2-11P-201ENST00000459191 187 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 Y_RNA.631-201ENST00000459607 101 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 SNORD19B-201ENST00000459623 84 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 AC098869.1-201ENST00000481627 292 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 RNU6-977P-201ENST00000516411 103 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 RNU6-1110P-201ENST00000516462 101 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SCN4AP35499 AC127455.1-201ENST00000565496 145 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 MIR4724-201ENST00000579485 89 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 MIR5688-201ENST00000580619 83 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 AC008507.4-201ENST00000585464 127 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 AP000753.3-201ENST00000604083 169 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 AL627230.5-201ENST00000619807 58 ntBASIC0.43□□□□□ -2.34
SCN4AP35499 RNU6-937P-201ENST00000384325 106 ntBASIC0.42□□□□□ -2.34
SCN4AP35499 Y_RNA.621-201ENST00000411065 96 ntBASIC0.42□□□□□ -2.34
SCN4AP35499 RNU2-55P-201ENST00000411146 174 ntBASIC0.42□□□□□ -2.34
SCN4AP35499 MTCO1P5-201ENST00000433573 344 ntBASIC0.42□□□□□ -2.34
SCN4AP35499 RNU7-73P-201ENST00000458743 63 ntBASIC0.42□□□□□ -2.34
SCN4AP35499 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.42□□□□□ -2.34
SCN4AP35499 RNU2-13P-201ENST00000515909 113 ntBASIC0.42□□□□□ -2.34
SCN4AP35499 AC012433.1-201ENST00000588916 398 ntBASIC0.42□□□□□ -2.34
SCN4AP35499 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.42□□□□□ -2.34
SCN4AP35499 AC023934.1-201ENST00000574529 2389 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 Y_RNA.136-201ENST00000363444 102 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 RNU6-1209P-201ENST00000363655 107 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 RNU6-806P-201ENST00000365147 105 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 RNU6-934P-201ENST00000365154 107 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 Y_RNA.541-201ENST00000384640 113 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 SNORA26.5-201ENST00000391215 123 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 AL603910.2-201ENST00000407268 136 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 RNU6-383P-201ENST00000410864 94 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 AC010655.3-201ENST00000478818 450 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 RNU6-976P-201ENST00000516086 111 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 AC007751.1-201ENST00000529260 376 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 MIR4804-201ENST00000581683 73 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 uc_338.17-201ENST00000619633 179 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 Y_RNA.44-201ENST00000362676 108 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 SNORD113-8-201ENST00000363497 74 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 MIR15B-201ENST00000385045 98 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
SCN4AP35499 RNU2-64P-201ENST00000411315 191 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN4AP35499 SNORD123-201ENST00000459473 70 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 RNU6-830P-201ENST00000516353 107 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 RNU6-126P-201ENST00000516685 103 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.41□□□□□ -2.34
SCN4AP35499 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN4AP35499 MIR5589-201ENST00000579442 60 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 AC005357.1-201ENST00000588399 301 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 AC134878.1-201ENST00000619901 243 ntBASIC0.41□□□□□ -2.34
SCN4AP35499 MIR1-1-201ENST00000362147 71 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 Y_RNA.31-201ENST00000362574 102 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 SNORD115-28-201ENST00000363931 81 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms