Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RNU2-55P-201ENST00000411146 174 ntBASIC1.2□□□□□ -2.22
ABCD3P28288 snoU13.25-201ENST00000458945 104 ntBASIC1.2□□□□□ -2.22
ABCD3P28288 RNU4-57P-201ENST00000515980 135 ntBASIC1.2□□□□□ -2.22
ABCD3P28288 AP003716.2-201ENST00000528260 108 ntBASIC1.2□□□□□ -2.22
ABCD3P28288 AC012433.1-201ENST00000588916 398 ntBASIC1.2□□□□□ -2.22
ABCD3P28288 MIR4251-201ENST00000635819 61 ntBASIC1.2□□□□□ -2.22
ABCD3P28288 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
ABCD3P28288 Y_RNA.122-201ENST00000363331 96 ntBASIC1.19□□□□□ -2.22
ABCD3P28288 Y_RNA.537-201ENST00000384626 109 ntBASIC1.19□□□□□ -2.22
ABCD3P28288 MIR499A-201ENST00000384903 122 ntBASIC1.19□□□□□ -2.22
ABCD3P28288 SNORD28B-201ENST00000390993 75 ntBASIC1.19□□□□□ -2.22
ABCD3P28288 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.19□□□□□ -2.22
ABCD3P28288 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.19□□□□□ -2.22
ABCD3P28288 SNORD127-201ENST00000458892 86 ntBASIC1.19□□□□□ -2.22
ABCD3P28288 RNU7-90P-201ENST00000459216 62 ntBASIC1.19□□□□□ -2.22
ABCD3P28288 RNU7-21P-201ENST00000459430 62 ntBASIC1.19□□□□□ -2.22
ABCD3P28288 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.19□□□□□ -2.22
ABCD3P28288 RNU11-2P-201ENST00000516898 142 ntBASIC1.19□□□□□ -2.22
ABCD3P28288 MIR3660-201ENST00000584845 100 ntBASIC1.19□□□□□ -2.22
ABCD3P28288 AL353770.2-201ENST00000620024 78 ntBASIC1.19□□□□□ -2.22
ABCD3P28288 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
ABCD3P28288 Y_RNA.547-201ENST00000384654 119 ntBASIC1.18□□□□□ -2.22
ABCD3P28288 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
ABCD3P28288 RNU7-25P-201ENST00000516544 62 ntBASIC1.18□□□□□ -2.22
ABCD3P28288 RNU6-365P-201ENST00000517113 106 ntBASIC1.18□□□□□ -2.22
ABCD3P28288 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
ABCD3P28288 AL157834.3-201ENST00000615543 103 ntBASIC1.18□□□□□ -2.22
ABCD3P28288 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
ABCD3P28288 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ABCD3P28288 Y_RNA.327-201ENST00000365201 102 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 SNORD24-201ENST00000383884 75 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 Y_RNA.486-201ENST00000384398 107 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 SNORA51.10-201ENST00000384418 136 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 SNORA75.2-201ENST00000391138 150 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 SNORA75.3-201ENST00000391231 150 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 RNU2-38P-201ENST00000410856 79 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 RNU6-651P-201ENST00000411040 105 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 RNU6-847P-201ENST00000411115 108 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.17□□□□□ -2.22
ABCD3P28288 AC002429.1-201ENST00000437672 148 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 AC107297.1-201ENST00000459991 176 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 RPS26P48-201ENST00000491713 339 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 RNU7-181P-201ENST00000517234 74 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 MIR8070-201ENST00000616510 88 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 SEPT14P17-201ENST00000617978 177 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 AL365265.1-201ENST00000621045 234 ntBASIC1.17□□□□□ -2.22
ABCD3P28288 Y_RNA.54-201ENST00000362766 105 ntBASIC1.16□□□□□ -2.22
ABCD3P28288 Y_RNA.262-201ENST00000364641 102 ntBASIC1.16□□□□□ -2.22
ABCD3P28288 Y_RNA.269-201ENST00000364685 89 ntBASIC1.16□□□□□ -2.22
ABCD3P28288 Y_RNA.562-201ENST00000384695 113 ntBASIC1.16□□□□□ -2.22
ABCD3P28288 MIR200A-201ENST00000384875 90 ntBASIC1.16□□□□□ -2.22
ABCD3P28288 MIR616-201ENST00000385293 97 ntBASIC1.16□□□□□ -2.22
ABCD3P28288 AC087499.4-201ENST00000448505 178 ntBASIC1.16□□□□□ -2.22
ABCD3P28288 RPS29P29-201ENST00000456396 171 ntBASIC1.16□□□□□ -2.22
ABCD3P28288 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.16□□□□□ -2.22
ABCD3P28288 Y_RNA.666-201ENST00000516187 112 ntBASIC1.16□□□□□ -2.22
ABCD3P28288 RNU6-1299P-201ENST00000516316 100 ntBASIC1.16□□□□□ -2.22
ABCD3P28288 AL442067.1-201ENST00000613261 223 ntBASIC1.16□□□□□ -2.22
ABCD3P28288 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ABCD3P28288 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.15□□□□□ -2.22
ABCD3P28288 SNORA25.3-201ENST00000363205 127 ntBASIC1.15□□□□□ -2.23
ABCD3P28288 SNORD115-28-201ENST00000363931 81 ntBASIC1.15□□□□□ -2.23
ABCD3P28288 RNU4-17P-201ENST00000365598 141 ntBASIC1.15□□□□□ -2.23
ABCD3P28288 Y_RNA.416-201ENST00000384014 113 ntBASIC1.15□□□□□ -2.23
ABCD3P28288 Y_RNA.572-201ENST00000384757 98 ntBASIC1.15□□□□□ -2.23
ABCD3P28288 RNU6-1228P-201ENST00000391014 107 ntBASIC1.15□□□□□ -2.23
ABCD3P28288 MIR1185-1-201ENST00000408598 86 ntBASIC1.15□□□□□ -2.23
ABCD3P28288 MRPL35P3-201ENST00000421557 364 ntBASIC1.15□□□□□ -2.23
ABCD3P28288 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.15□□□□□ -2.23
ABCD3P28288 RNU6-1132P-201ENST00000459214 107 ntBASIC1.15□□□□□ -2.23
ABCD3P28288 RNA5SP153-201ENST00000516498 76 ntBASIC1.15□□□□□ -2.23
ABCD3P28288 RNU6-504P-201ENST00000516568 104 ntBASIC1.15□□□□□ -2.23
ABCD3P28288 AC109810.1-201ENST00000534066 224 ntBASIC1.15□□□□□ -2.23
ABCD3P28288 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.15□□□□□ -2.23
ABCD3P28288 AC008163.1-202ENST00000636004 2889 ntBASIC1.15□□□□□ -2.23
ABCD3P28288 AL391516.1-201ENST00000554380 2449 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-34-201ENST00000362441 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-12-201ENST00000362583 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-29-201ENST00000362834 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-9-201ENST00000362912 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-21-201ENST00000362963 81 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-14-201ENST00000363090 81 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-13-201ENST00000363358 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-41-201ENST00000363608 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-11-201ENST00000363616 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-5-201ENST00000363633 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-39-201ENST00000363694 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-4-201ENST00000363810 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-16-201ENST00000363887 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-6-201ENST00000363942 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-42-201ENST00000364273 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 Y_RNA.277-201ENST00000364754 102 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-15-201ENST00000364809 81 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-1-201ENST00000364961 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-26-201ENST00000365067 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-10-201ENST00000365073 81 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-43-201ENST00000365503 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 SNORD115-36-201ENST00000365629 82 ntBASIC1.14□□□□□ -2.23
ABCD3P28288 RNU2-13P-201ENST00000515909 113 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms