Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC040926.1-201ENST00000530195 238 ntBASIC-1.11□□□□□ -2.59
IFNA1P01562 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.11□□□□□ -2.59
IFNA1P01562 AF246928.1-201ENST00000623768 87 ntBASIC-1.11□□□□□ -2.59
IFNA1P01562 RNU4-28P-201ENST00000364739 141 ntBASIC-1.12□□□□□ -2.59
IFNA1P01562 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.12□□□□□ -2.59
IFNA1P01562 RNU6-708P-201ENST00000384217 107 ntBASIC-1.12□□□□□ -2.59
IFNA1P01562 MIR190B-201ENST00000401119 79 ntBASIC-1.12□□□□□ -2.59
IFNA1P01562 MIR876-201ENST00000401147 81 ntBASIC-1.12□□□□□ -2.59
IFNA1P01562 RNU2-11P-201ENST00000459191 187 ntBASIC-1.12□□□□□ -2.59
IFNA1P01562 AP000942.4-201ENST00000604811 241 ntBASIC-1.12□□□□□ -2.59
IFNA1P01562 AL133255.1-201ENST00000606374 441 ntBASIC-1.12□□□□□ -2.59
IFNA1P01562 RNU6-522P-201ENST00000364497 107 ntBASIC-1.13□□□□□ -2.59
IFNA1P01562 RNU4-75P-201ENST00000364621 146 ntBASIC-1.13□□□□□ -2.59
IFNA1P01562 RNU6-726P-201ENST00000364680 107 ntBASIC-1.13□□□□□ -2.59
IFNA1P01562 RNU6-596P-201ENST00000365395 98 ntBASIC-1.13□□□□□ -2.59
IFNA1P01562 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.13□□□□□ -2.59
IFNA1P01562 AL603910.2-201ENST00000407268 136 ntBASIC-1.13□□□□□ -2.59
IFNA1P01562 MTND1P27-201ENST00000451117 902 ntBASIC-1.13□□□□□ -2.59
IFNA1P01562 RNU7-87P-201ENST00000459343 62 ntBASIC-1.13□□□□□ -2.59
IFNA1P01562 RPL7P42-201ENST00000481005 679 ntBASIC-1.13□□□□□ -2.59
IFNA1P01562 AP003072.1-201ENST00000531740 145 ntBASIC-1.13□□□□□ -2.59
IFNA1P01562 MTND5P34-201ENST00000568888 325 ntBASIC-1.13□□□□□ -2.59
IFNA1P01562 MIR5188-201ENST00000583467 113 ntBASIC-1.13□□□□□ -2.59
IFNA1P01562 RNU6-553P-201ENST00000364047 96 ntBASIC-1.14□□□□□ -2.59
IFNA1P01562 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.14□□□□□ -2.59
IFNA1P01562 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.14□□□□□ -2.59
IFNA1P01562 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.14□□□□□ -2.59
IFNA1P01562 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.14□□□□□ -2.59
IFNA1P01562 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.14□□□□□ -2.59
IFNA1P01562 MTND3P21-201ENST00000433774 331 ntBASIC-1.14□□□□□ -2.59
IFNA1P01562 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.14□□□□□ -2.59
IFNA1P01562 RNU7-25P-201ENST00000516544 62 ntBASIC-1.14□□□□□ -2.59
IFNA1P01562 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.14□□□□□ -2.59
IFNA1P01562 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.14□□□□□ -2.59
IFNA1P01562 AC084368.1-201ENST00000620935 65 ntBASIC-1.14□□□□□ -2.59
IFNA1P01562 AC097520.1-201ENST00000624435 385 ntBASIC-1.14□□□□□ -2.59
IFNA1P01562 MIR101-2-201ENST00000362195 79 ntBASIC-1.15□□□□□ -2.59
IFNA1P01562 RNU6-318P-201ENST00000384283 103 ntBASIC-1.15□□□□□ -2.59
IFNA1P01562 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.15□□□□□ -2.59
IFNA1P01562 RNU6-966P-201ENST00000516479 104 ntBASIC-1.15□□□□□ -2.59
IFNA1P01562 RNU6-232P-201ENST00000517144 64 ntBASIC-1.15□□□□□ -2.59
IFNA1P01562 RNA5SP66-201ENST00000517178 101 ntBASIC-1.15□□□□□ -2.59
IFNA1P01562 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.15□□□□□ -2.59
IFNA1P01562 MIR4306-201ENST00000583390 91 ntBASIC-1.15□□□□□ -2.59
IFNA1P01562 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.16□□□□□ -2.6
IFNA1P01562 SNORA72.6-201ENST00000384520 129 ntBASIC-1.16□□□□□ -2.6
IFNA1P01562 RNU6-601P-201ENST00000384540 107 ntBASIC-1.16□□□□□ -2.6
IFNA1P01562 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.16□□□□□ -2.6
IFNA1P01562 RNU6-437P-201ENST00000459408 95 ntBASIC-1.16□□□□□ -2.6
IFNA1P01562 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.16□□□□□ -2.6
IFNA1P01562 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.16□□□□□ -2.6
IFNA1P01562 AC079248.2-201ENST00000623779 326 ntBASIC-1.16□□□□□ -2.6
IFNA1P01562 AC073869.9-201ENST00000641610 120 ntBASIC-1.16□□□□□ -2.6
IFNA1P01562 AL596211.1-201ENST00000569873 2277 ntBASIC-1.17□□□□□ -2.6
IFNA1P01562 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.17□□□□□ -2.6
IFNA1P01562 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.17□□□□□ -2.6
IFNA1P01562 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.17□□□□□ -2.6
IFNA1P01562 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.17□□□□□ -2.6
IFNA1P01562 MTND2P39-201ENST00000457230 764 ntBASIC-1.17□□□□□ -2.6
IFNA1P01562 RNU7-125P-201ENST00000458760 62 ntBASIC-1.17□□□□□ -2.6
IFNA1P01562 SCARNA18B-201ENST00000458806 135 ntBASIC-1.17□□□□□ -2.6
IFNA1P01562 RNU6-261P-201ENST00000459506 102 ntBASIC-1.17□□□□□ -2.6
IFNA1P01562 RNU6-408P-201ENST00000515910 100 ntBASIC-1.17□□□□□ -2.6
IFNA1P01562 AC060788.1-201ENST00000521318 469 ntBASIC-1.17□□□□□ -2.6
IFNA1P01562 MIR3165-201ENST00000579874 75 ntBASIC-1.17□□□□□ -2.6
IFNA1P01562 MIR4491-201ENST00000581087 68 ntBASIC-1.17□□□□□ -2.6
IFNA1P01562 AC245884.10-201ENST00000597355 337 ntBASIC-1.17□□□□□ -2.6
IFNA1P01562 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.18□□□□□ -2.6
IFNA1P01562 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.18□□□□□ -2.6
IFNA1P01562 SNORA1-201ENST00000384107 130 ntBASIC-1.18□□□□□ -2.6
IFNA1P01562 U8.15-201ENST00000390947 134 ntBASIC-1.18□□□□□ -2.6
IFNA1P01562 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.18□□□□□ -2.6
IFNA1P01562 SNORD12B-201ENST00000410433 91 ntBASIC-1.18□□□□□ -2.6
IFNA1P01562 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.18□□□□□ -2.6
IFNA1P01562 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.18□□□□□ -2.6
IFNA1P01562 AC011352.1-201ENST00000512300 793 ntBASIC-1.18□□□□□ -2.6
IFNA1P01562 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
IFNA1P01562 ZNF519P2-201ENST00000557032 169 ntBASIC-1.18□□□□□ -2.6
IFNA1P01562 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.18□□□□□ -2.6
IFNA1P01562 MIR2681-201ENST00000581814 105 ntBASIC-1.18□□□□□ -2.6
IFNA1P01562 AC018638.8-201ENST00000588755 281 ntBASIC-1.18□□□□□ -2.6
IFNA1P01562 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 Y_RNA.231-201ENST00000364358 102 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 RNU6-306P-201ENST00000384617 107 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 MIR548O-201ENST00000408583 114 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 RNA5SP237-201ENST00000410414 113 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 SNORD11.1-201ENST00000459482 85 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.19□□□□□ -2.6
IFNA1P01562 RNU6-759P-201ENST00000516740 103 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 AC055872.1-201ENST00000570978 278 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 AP003357.1-201ENST00000604497 148 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 RNU6-89P-201ENST00000606519 100 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 AP001330.5-201ENST00000607176 411 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 AP001282.2-201ENST00000616149 309 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 AL662814.1-201ENST00000617364 121 ntBASIC-1.19□□□□□ -2.6
IFNA1P01562 MIR409-201ENST00000362237 79 ntBASIC-1.2□□□□□ -2.6
IFNA1P01562 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.2□□□□□ -2.6
IFNA1P01562 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 211.1 ms