Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.06□□□□□ -2.42
UPK1BO75841 RNY1P14-201ENST00000384426 108 ntBASIC-0.06□□□□□ -2.42
UPK1BO75841 MIR644A-201ENST00000385262 94 ntBASIC-0.06□□□□□ -2.42
UPK1BO75841 SNORA26.5-201ENST00000391215 123 ntBASIC-0.06□□□□□ -2.42
UPK1BO75841 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.06□□□□□ -2.42
UPK1BO75841 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.06□□□□□ -2.42
UPK1BO75841 snoU13.2-201ENST00000459201 104 ntBASIC-0.06□□□□□ -2.42
UPK1BO75841 AP003327.1-201ENST00000529684 127 ntBASIC-0.06□□□□□ -2.42
UPK1BO75841 MIR4768-201ENST00000585270 74 ntBASIC-0.06□□□□□ -2.42
UPK1BO75841 VN1R91P-201ENST00000594377 169 ntBASIC-0.06□□□□□ -2.42
UPK1BO75841 AC104408.1-201ENST00000605241 170 ntBASIC-0.06□□□□□ -2.42
UPK1BO75841 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.06□□□□□ -2.42
UPK1BO75841 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.06□□□□□ -2.42
UPK1BO75841 RNU4-80P-201ENST00000363200 141 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 SNORA42.1-201ENST00000363515 137 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 RNU6-937P-201ENST00000384325 106 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 RNU2-59P-201ENST00000410482 191 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 RNU6-602P-201ENST00000411155 105 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 MTCO1P5-201ENST00000433573 344 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 AC099799.1-201ENST00000439809 192 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 RNU7-73P-201ENST00000458743 63 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 RNU7-149P-201ENST00000516739 59 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 AC007751.1-201ENST00000529260 376 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.07□□□□□ -2.42
UPK1BO75841 SNORA4-201ENST00000584302 138 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 AC023932.2-201ENST00000603176 175 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 AP000942.4-201ENST00000604811 241 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 MIR6718-201ENST00000616153 80 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 AC022140.2-201ENST00000623500 188 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 AC010487.4-201ENST00000637027 61 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 AC073869.6-201ENST00000640656 341 ntBASIC-0.07□□□□□ -2.42
UPK1BO75841 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.07□□□□□ -2.42
UPK1BO75841 RNU6-490P-201ENST00000362985 107 ntBASIC-0.08□□□□□ -2.42
UPK1BO75841 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.08□□□□□ -2.42
UPK1BO75841 RNU4-67P-201ENST00000364569 141 ntBASIC-0.08□□□□□ -2.42
UPK1BO75841 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.08□□□□□ -2.42
UPK1BO75841 RNU6-21P-201ENST00000384710 107 ntBASIC-0.08□□□□□ -2.42
UPK1BO75841 SNORD12C-201ENST00000386307 89 ntBASIC-0.08□□□□□ -2.42
UPK1BO75841 RNU6-308P-201ENST00000390957 107 ntBASIC-0.08□□□□□ -2.42
UPK1BO75841 AC069271.1-201ENST00000445577 156 ntBASIC-0.08□□□□□ -2.42
UPK1BO75841 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.08□□□□□ -2.42
UPK1BO75841 RNU6-559P-201ENST00000516151 98 ntBASIC-0.08□□□□□ -2.42
UPK1BO75841 MIR4514-201ENST00000581410 57 ntBASIC-0.08□□□□□ -2.42
UPK1BO75841 AC010205.1-201ENST00000616668 449 ntBASIC-0.08□□□□□ -2.42
UPK1BO75841 SNORD114-5-201ENST00000362928 70 ntBASIC-0.09□□□□□ -2.42
UPK1BO75841 SNORA1.1-201ENST00000364671 133 ntBASIC-0.09□□□□□ -2.42
UPK1BO75841 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.09□□□□□ -2.42
UPK1BO75841 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.09□□□□□ -2.42
UPK1BO75841 SNORD116-4-201ENST00000384733 96 ntBASIC-0.09□□□□□ -2.42
UPK1BO75841 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.09□□□□□ -2.42
UPK1BO75841 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.09□□□□□ -2.42
UPK1BO75841 SNORA62.5-201ENST00000516634 120 ntBASIC-0.09□□□□□ -2.42
UPK1BO75841 MIR6515-201ENST00000619843 57 ntBASIC-0.09□□□□□ -2.42
UPK1BO75841 MIR4272-201ENST00000635924 64 ntBASIC-0.09□□□□□ -2.42
UPK1BO75841 MIR30D-201ENST00000362283 70 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 SNORA9.1-201ENST00000362412 131 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 SNORD115-28-201ENST00000363931 81 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 SNORD81.2-201ENST00000365153 76 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 MIR563-201ENST00000385080 79 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 PCNPP3-201ENST00000393579 471 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 RNU6-383P-201ENST00000410864 94 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 RNU6-938P-201ENST00000411285 103 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 MTND1P14-201ENST00000427400 950 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 MTATP6P26-201ENST00000445926 662 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 AC023449.1-201ENST00000454464 154 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 RNA5SP268-201ENST00000516828 124 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 AL049861.1-201ENST00000603130 150 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 MIR6755-201ENST00000619993 66 ntBASIC-0.1□□□□□ -2.43
UPK1BO75841 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.11□□□□□ -2.43
UPK1BO75841 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.11□□□□□ -2.43
UPK1BO75841 SNORA27-201ENST00000384323 126 ntBASIC-0.11□□□□□ -2.43
UPK1BO75841 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
UPK1BO75841 SNORA40.5-201ENST00000391061 128 ntBASIC-0.11□□□□□ -2.43
UPK1BO75841 MIR1287-201ENST00000408492 90 ntBASIC-0.11□□□□□ -2.43
UPK1BO75841 POLR2KP2-201ENST00000438155 177 ntBASIC-0.11□□□□□ -2.43
UPK1BO75841 AL138752.1-201ENST00000452964 351 ntBASIC-0.11□□□□□ -2.43
UPK1BO75841 RNU6-469P-201ENST00000516253 101 ntBASIC-0.11□□□□□ -2.43
UPK1BO75841 RNU7-53P-201ENST00000516705 60 ntBASIC-0.11□□□□□ -2.43
UPK1BO75841 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.11□□□□□ -2.43
UPK1BO75841 AC122108.2-201ENST00000611946 526 ntBASIC-0.11□□□□□ -2.43
UPK1BO75841 MTND4LP32-201ENST00000636111 270 ntBASIC-0.11□□□□□ -2.43
UPK1BO75841 MIR371B-201ENST00000638082 66 ntBASIC-0.11□□□□□ -2.43
UPK1BO75841 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.12□□□□□ -2.43
UPK1BO75841 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.12□□□□□ -2.43
UPK1BO75841 RNU6-740P-201ENST00000364734 105 ntBASIC-0.12□□□□□ -2.43
UPK1BO75841 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.12□□□□□ -2.43
UPK1BO75841 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.12□□□□□ -2.43
UPK1BO75841 SNORD93-201ENST00000408813 74 ntBASIC-0.12□□□□□ -2.43
UPK1BO75841 RNU4-83P-201ENST00000410863 133 ntBASIC-0.12□□□□□ -2.43
UPK1BO75841 AL512326.2-201ENST00000426359 151 ntBASIC-0.12□□□□□ -2.43
UPK1BO75841 AC087499.4-201ENST00000448505 178 ntBASIC-0.12□□□□□ -2.43
UPK1BO75841 RPS29P24-201ENST00000486345 171 ntBASIC-0.12□□□□□ -2.43
UPK1BO75841 RNA5SP227-201ENST00000516184 113 ntBASIC-0.12□□□□□ -2.43
UPK1BO75841 MIR7107-201ENST00000611489 80 ntBASIC-0.12□□□□□ -2.43
UPK1BO75841 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms