Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SNORA22B-201ENST00000383876 138 ntBASIC0.61□□□□□ -2.31
TRIM3O75382 RNU6-662P-201ENST00000384253 104 ntBASIC0.61□□□□□ -2.31
TRIM3O75382 Y_RNA.541-201ENST00000384640 113 ntBASIC0.61□□□□□ -2.31
TRIM3O75382 Y_RNA.547-201ENST00000384654 119 ntBASIC0.61□□□□□ -2.31
TRIM3O75382 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
TRIM3O75382 MIR548O-201ENST00000408583 114 ntBASIC0.61□□□□□ -2.31
TRIM3O75382 RNU6-613P-201ENST00000410412 108 ntBASIC0.61□□□□□ -2.31
TRIM3O75382 BTF3P11-201ENST00000426582 477 ntBASIC0.61□□□□□ -2.31
TRIM3O75382 COX6CP6-201ENST00000490840 228 ntBASIC0.61□□□□□ -2.31
TRIM3O75382 RNU6-1110P-201ENST00000516462 101 ntBASIC0.61□□□□□ -2.31
TRIM3O75382 RNU7-149P-201ENST00000516739 59 ntBASIC0.61□□□□□ -2.31
TRIM3O75382 Y_RNA.721-201ENST00000517207 102 ntBASIC0.61□□□□□ -2.31
TRIM3O75382 AC243994.1-201ENST00000618627 109 ntBASIC0.61□□□□□ -2.31
TRIM3O75382 Y_RNA.19-201ENST00000362462 99 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 snoU2_19.2-201ENST00000363024 80 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 Y_RNA.138-201ENST00000363462 102 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 Y_RNA.214-201ENST00000364201 112 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 Y_RNA.293-201ENST00000364908 93 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 RNU6-290P-201ENST00000365212 101 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 RPL21P38-201ENST00000418090 167 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.6□□□□□ -2.31
TRIM3O75382 SCARNA8-201ENST00000515924 131 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 Y_RNA.666-201ENST00000516187 112 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 RNU2-31P-201ENST00000516954 155 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 AC131281.1-201ENST00000522984 164 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 AC004812.1-201ENST00000540773 146 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 MIR5692C2-201ENST00000577959 77 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 uc_338.4-201ENST00000616635 176 ntBASIC0.6□□□□□ -2.31
TRIM3O75382 MIR367-201ENST00000362299 68 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 SNORA25.1-201ENST00000362326 128 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 Y_RNA.26-201ENST00000362539 101 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 RNU6-1272P-201ENST00000362776 107 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 Y_RNA.128-201ENST00000363391 112 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 RNU6-770P-201ENST00000363929 105 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 Y_RNA.210-201ENST00000364161 110 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 Y_RNA.216-201ENST00000364205 93 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 Y_RNA.242-201ENST00000364473 110 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 RNU5E-4P-201ENST00000364931 120 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 RNU6-867P-201ENST00000364956 107 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 Y_RNA.460-201ENST00000384255 102 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 Y_RNA.494-201ENST00000384432 111 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 Y_RNA.527-201ENST00000384573 102 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 RNU6-847P-201ENST00000411115 108 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 snoU13.21-201ENST00000459368 105 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 RNU2-13P-201ENST00000515909 113 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 MIR4724-201ENST00000579485 89 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 AL136317.1-201ENST00000612653 226 ntBASIC0.59□□□□□ -2.31
TRIM3O75382 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
TRIM3O75382 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
TRIM3O75382 MIR1-1-201ENST00000362147 71 ntBASIC0.58□□□□□ -2.32
TRIM3O75382 RNU1-133P-201ENST00000364867 167 ntBASIC0.58□□□□□ -2.32
TRIM3O75382 Y_RNA.380-201ENST00000365663 111 ntBASIC0.58□□□□□ -2.32
TRIM3O75382 RNU6-514P-201ENST00000384208 107 ntBASIC0.58□□□□□ -2.32
TRIM3O75382 RNU6-110P-201ENST00000384508 104 ntBASIC0.58□□□□□ -2.32
TRIM3O75382 RNU6-205P-201ENST00000390858 107 ntBASIC0.58□□□□□ -2.32
TRIM3O75382 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
TRIM3O75382 AC091959.1-201ENST00000495857 238 ntBASIC0.58□□□□□ -2.32
TRIM3O75382 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.58□□□□□ -2.32
TRIM3O75382 AC011195.1-201ENST00000578177 177 ntBASIC0.58□□□□□ -2.32
TRIM3O75382 AL021707.8-201ENST00000609428 183 ntBASIC0.58□□□□□ -2.32
TRIM3O75382 AC134503.1-201ENST00000633048 54 ntBASIC0.58□□□□□ -2.32
TRIM3O75382 Y_RNA.64-201ENST00000362845 102 ntBASIC0.57□□□□□ -2.32
TRIM3O75382 Y_RNA.168-201ENST00000363740 102 ntBASIC0.57□□□□□ -2.32
TRIM3O75382 RNU4-10P-201ENST00000364383 140 ntBASIC0.57□□□□□ -2.32
TRIM3O75382 Y_RNA.241-201ENST00000364470 117 ntBASIC0.57□□□□□ -2.32
TRIM3O75382 Y_RNA.455-201ENST00000384230 98 ntBASIC0.57□□□□□ -2.32
TRIM3O75382 SNORA53-201ENST00000391141 249 ntBASIC0.57□□□□□ -2.32
TRIM3O75382 RNA5SP496-201ENST00000391240 109 ntBASIC0.57□□□□□ -2.32
TRIM3O75382 MIR1827-201ENST00000408549 66 ntBASIC0.57□□□□□ -2.32
TRIM3O75382 AC090844.1-201ENST00000422019 156 ntBASIC0.57□□□□□ -2.32
TRIM3O75382 AC107297.1-201ENST00000459991 176 ntBASIC0.57□□□□□ -2.32
TRIM3O75382 Y_RNA.711-201ENST00000516993 102 ntBASIC0.57□□□□□ -2.32
TRIM3O75382 snoU18.1-201ENST00000629629 71 ntBASIC0.57□□□□□ -2.32
TRIM3O75382 Y_RNA.16-201ENST00000362421 102 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 Y_RNA.61-201ENST00000362835 102 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 Y_RNA.118-201ENST00000363300 101 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 SNORD45.3-201ENST00000363836 72 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 RNU6-326P-201ENST00000365480 107 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 Y_RNA.486-201ENST00000384398 107 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 RNU6-125P-201ENST00000384505 107 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 Y_RNA.535-201ENST00000384612 99 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 MIR489-201ENST00000384923 84 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 SNORD105-201ENST00000386910 85 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 RNU1-119P-201ENST00000391122 165 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 AC244098.3-201ENST00000424803 96 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 MTCO2P12-201ENST00000427426 682 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 AC015818.7-201ENST00000428754 109 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 AC087499.7-201ENST00000441958 109 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.56□□□□□ -2.32
TRIM3O75382 RNU7-67P-201ENST00000459003 62 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 RNU6-958P-201ENST00000516995 106 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 AC007751.1-201ENST00000529260 376 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.56□□□□□ -2.32
TRIM3O75382 AC113195.1-201ENST00000579952 141 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 AP000753.3-201ENST00000604083 169 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 AC037487.3-201ENST00000606668 112 ntBASIC0.56□□□□□ -2.32
TRIM3O75382 AL008718.3-201ENST00000610217 321 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms