Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC079140.2-201ENST00000506193 142 ntBASIC1.42□□□□□ -2.18
ZIC3O60481 FAM106DP-201ENST00000586416 501 ntBASIC1.42□□□□□ -2.18
ZIC3O60481 AL513534.2-201ENST00000603836 250 ntBASIC1.42□□□□□ -2.18
ZIC3O60481 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
ZIC3O60481 RNU6-888P-201ENST00000363010 101 ntBASIC1.41□□□□□ -2.18
ZIC3O60481 Y_RNA.338-201ENST00000365320 114 ntBASIC1.41□□□□□ -2.18
ZIC3O60481 Y_RNA.547-201ENST00000384654 119 ntBASIC1.41□□□□□ -2.18
ZIC3O60481 MIR518F-201ENST00000384973 87 ntBASIC1.41□□□□□ -2.18
ZIC3O60481 SNORD41-201ENST00000386967 70 ntBASIC1.41□□□□□ -2.18
ZIC3O60481 SNORA79-201ENST00000408376 140 ntBASIC1.41□□□□□ -2.18
ZIC3O60481 MIR548O-201ENST00000408583 114 ntBASIC1.41□□□□□ -2.18
ZIC3O60481 AL603825.1-201ENST00000438481 80 ntBASIC1.41□□□□□ -2.18
ZIC3O60481 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.41□□□□□ -2.18
ZIC3O60481 RNU7-25P-201ENST00000516544 62 ntBASIC1.41□□□□□ -2.18
ZIC3O60481 RNU6-504P-201ENST00000516568 104 ntBASIC1.41□□□□□ -2.18
ZIC3O60481 MIR4431-201ENST00000579990 94 ntBASIC1.41□□□□□ -2.18
ZIC3O60481 MIR4303-201ENST00000581299 66 ntBASIC1.41□□□□□ -2.18
ZIC3O60481 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.41□□□□□ -2.18
ZIC3O60481 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.41□□□□□ -2.18
ZIC3O60481 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
ZIC3O60481 RNA5SP363-201ENST00000365072 115 ntBASIC1.4□□□□□ -2.19
ZIC3O60481 RNU6-643P-201ENST00000384018 107 ntBASIC1.4□□□□□ -2.19
ZIC3O60481 SNX2P2-201ENST00000424553 323 ntBASIC1.4□□□□□ -2.19
ZIC3O60481 AC108667.1-201ENST00000428618 249 ntBASIC1.4□□□□□ -2.19
ZIC3O60481 AC245517.4-201ENST00000448601 281 ntBASIC1.4□□□□□ -2.19
ZIC3O60481 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.4□□□□□ -2.19
ZIC3O60481 Y_RNA.662-201ENST00000516028 97 ntBASIC1.4□□□□□ -2.19
ZIC3O60481 AC019176.1-201ENST00000518519 225 ntBASIC1.4□□□□□ -2.19
ZIC3O60481 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
ZIC3O60481 MIR4285-201ENST00000581001 85 ntBASIC1.4□□□□□ -2.19
ZIC3O60481 MIR4422-201ENST00000581938 83 ntBASIC1.4□□□□□ -2.19
ZIC3O60481 AC098479.1-201ENST00000609225 154 ntBASIC1.4□□□□□ -2.19
ZIC3O60481 AC015726.2-201ENST00000620112 122 ntBASIC1.4□□□□□ -2.19
ZIC3O60481 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.39□□□□□ -2.19
ZIC3O60481 WWP1P1-201ENST00000466609 2769 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 RNU1-42P-201ENST00000364033 160 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 Y_RNA.441-201ENST00000384123 112 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 MIR517C-201ENST00000385103 95 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 PCNPP3-201ENST00000393579 471 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 RNU5E-9P-201ENST00000411164 104 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 SEPT7P4-201ENST00000437076 306 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 AC074198.2-201ENST00000508153 258 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 RNA5SP445-201ENST00000515889 115 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 RNU4-57P-201ENST00000515980 135 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 RNU6-322P-201ENST00000516010 103 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 RNU6-693P-201ENST00000516134 107 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 RNU6-922P-201ENST00000516753 99 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 MIR378D2-201ENST00000580636 98 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 AL645939.4-201ENST00000604495 135 ntBASIC1.39□□□□□ -2.19
ZIC3O60481 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.38□□□□□ -2.19
ZIC3O60481 RNU6-978P-201ENST00000364371 103 ntBASIC1.38□□□□□ -2.19
ZIC3O60481 RNU6-886P-201ENST00000384319 105 ntBASIC1.38□□□□□ -2.19
ZIC3O60481 AL451046.2-201ENST00000403074 277 ntBASIC1.38□□□□□ -2.19
ZIC3O60481 MIR1323-201ENST00000408090 73 ntBASIC1.38□□□□□ -2.19
ZIC3O60481 RPS27P16-201ENST00000425758 201 ntBASIC1.38□□□□□ -2.19
ZIC3O60481 AC005840.1-201ENST00000498412 377 ntBASIC1.38□□□□□ -2.19
ZIC3O60481 SNORA74.3-201ENST00000517108 154 ntBASIC1.38□□□□□ -2.19
ZIC3O60481 RNU6-1270P-201ENST00000517128 108 ntBASIC1.38□□□□□ -2.19
ZIC3O60481 AP000942.3-201ENST00000603702 160 ntBASIC1.38□□□□□ -2.19
ZIC3O60481 BX248123.2-201ENST00000606318 124 ntBASIC1.38□□□□□ -2.19
ZIC3O60481 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
ZIC3O60481 Y_RNA.150-201ENST00000363562 102 ntBASIC1.37□□□□□ -2.19
ZIC3O60481 RNU6-1065P-201ENST00000384513 106 ntBASIC1.37□□□□□ -2.19
ZIC3O60481 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
ZIC3O60481 U8.17-201ENST00000391292 132 ntBASIC1.37□□□□□ -2.19
ZIC3O60481 RNU4-62P-201ENST00000410125 130 ntBASIC1.37□□□□□ -2.19
ZIC3O60481 AC006461.1-201ENST00000412637 326 ntBASIC1.37□□□□□ -2.19
ZIC3O60481 SNORD123-201ENST00000459473 70 ntBASIC1.37□□□□□ -2.19
ZIC3O60481 RNU6-970P-201ENST00000516312 107 ntBASIC1.37□□□□□ -2.19
ZIC3O60481 SNORA18.7-201ENST00000516910 131 ntBASIC1.37□□□□□ -2.19
ZIC3O60481 RNU6-902P-201ENST00000517212 91 ntBASIC1.37□□□□□ -2.19
ZIC3O60481 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.37□□□□□ -2.19
ZIC3O60481 MIR3937-201ENST00000580135 106 ntBASIC1.37□□□□□ -2.19
ZIC3O60481 GHRLOS.1-201ENST00000610995 70 ntBASIC1.37□□□□□ -2.19
ZIC3O60481 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
ZIC3O60481 SNORD115-28-201ENST00000363931 81 ntBASIC1.36□□□□□ -2.19
ZIC3O60481 RNU4-84P-201ENST00000364200 139 ntBASIC1.36□□□□□ -2.19
ZIC3O60481 Y_RNA.270-201ENST00000364693 104 ntBASIC1.36□□□□□ -2.19
ZIC3O60481 SNORA1-201ENST00000384107 130 ntBASIC1.36□□□□□ -2.19
ZIC3O60481 Y_RNA.555-201ENST00000384673 110 ntBASIC1.36□□□□□ -2.19
ZIC3O60481 RNU6-938P-201ENST00000411285 103 ntBASIC1.36□□□□□ -2.19
ZIC3O60481 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.36□□□□□ -2.19
ZIC3O60481 AC108729.3-201ENST00000513484 108 ntBASIC1.36□□□□□ -2.19
ZIC3O60481 SNORD116-25-201ENST00000516517 92 ntBASIC1.36□□□□□ -2.19
ZIC3O60481 MIR3664-201ENST00000579074 99 ntBASIC1.36□□□□□ -2.19
ZIC3O60481 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.36□□□□□ -2.19
ZIC3O60481 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
ZIC3O60481 Y_RNA.37-201ENST00000362606 108 ntBASIC1.35□□□□□ -2.19
ZIC3O60481 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
ZIC3O60481 RNU6-239P-201ENST00000390990 99 ntBASIC1.35□□□□□ -2.19
ZIC3O60481 MIR1304-201ENST00000408243 91 ntBASIC1.35□□□□□ -2.19
ZIC3O60481 AF228730.3-201ENST00000436691 102 ntBASIC1.35□□□□□ -2.19
ZIC3O60481 AC107027.2-201ENST00000512197 115 ntBASIC1.35□□□□□ -2.19
ZIC3O60481 Y_RNA.676-201ENST00000516393 96 ntBASIC1.35□□□□□ -2.19
ZIC3O60481 RNU7-121P-201ENST00000516604 62 ntBASIC1.35□□□□□ -2.19
ZIC3O60481 RNU7-181P-201ENST00000517234 74 ntBASIC1.35□□□□□ -2.19
ZIC3O60481 AL512310.8-201ENST00000550183 120 ntBASIC1.35□□□□□ -2.19
ZIC3O60481 MIR548AR-201ENST00000582191 57 ntBASIC1.35□□□□□ -2.19
ZIC3O60481 AL365205.2-201ENST00000594586 68 ntBASIC1.35□□□□□ -2.19
ZIC3O60481 AC134878.1-201ENST00000619901 243 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 1024.6 ms