Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RNU7-25P-201ENST00000516544 62 ntBASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 AL365434.2-201ENST00000607979 234 ntBASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 Y_RNA.180-201ENST00000363867 113 ntBASIC1.5□□□□□ -2.17
TCRBV7S3A2A0A539 RNU6-239P-201ENST00000390990 99 ntBASIC1.5□□□□□ -2.17
TCRBV7S3A2A0A539 AL451046.2-201ENST00000403074 277 ntBASIC1.5□□□□□ -2.17
TCRBV7S3A2A0A539 SNX2P2-201ENST00000424553 323 ntBASIC1.5□□□□□ -2.17
TCRBV7S3A2A0A539 AC074198.2-201ENST00000508153 258 ntBASIC1.5□□□□□ -2.17
TCRBV7S3A2A0A539 AC107027.2-201ENST00000512197 115 ntBASIC1.5□□□□□ -2.17
TCRBV7S3A2A0A539 RNA5SP445-201ENST00000515889 115 ntBASIC1.5□□□□□ -2.17
TCRBV7S3A2A0A539 SNORD116-25-201ENST00000516517 92 ntBASIC1.5□□□□□ -2.17
TCRBV7S3A2A0A539 SNORA74.3-201ENST00000517108 154 ntBASIC1.5□□□□□ -2.17
TCRBV7S3A2A0A539 MIR3945-201ENST00000581853 98 ntBASIC1.5□□□□□ -2.17
TCRBV7S3A2A0A539 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.5□□□□□ -2.17
TCRBV7S3A2A0A539 Y_RNA.150-201ENST00000363562 102 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 SNORD115-28-201ENST00000363931 81 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 RNA5SP190-201ENST00000365222 118 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 Y_RNA.357-201ENST00000365487 109 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 RNU6-597P-201ENST00000365620 102 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 RNU6-1065P-201ENST00000384513 106 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 Y_RNA.542-201ENST00000384641 111 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 SNORD41-201ENST00000386967 70 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 MIR548I3-201ENST00000408378 149 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 MIR548I1-201ENST00000408810 149 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 AC006461.1-201ENST00000412637 326 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 AL354695.1-201ENST00000427935 228 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 SNORD13-201ENST00000459299 104 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 AL365205.2-201ENST00000594586 68 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 AL645939.4-201ENST00000604495 135 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 AC134878.1-201ENST00000619901 243 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 AC015726.2-201ENST00000620112 122 ntBASIC1.49□□□□□ -2.17
TCRBV7S3A2A0A539 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TCRBV7S3A2A0A539 Y_RNA.337-201ENST00000365312 102 ntBASIC1.48□□□□□ -2.17
TCRBV7S3A2A0A539 RNU6-1292P-201ENST00000383856 107 ntBASIC1.48□□□□□ -2.17
TCRBV7S3A2A0A539 U8.17-201ENST00000391292 132 ntBASIC1.48□□□□□ -2.17
TCRBV7S3A2A0A539 RNU6-394P-201ENST00000410735 107 ntBASIC1.48□□□□□ -2.17
TCRBV7S3A2A0A539 AC087499.4-201ENST00000448505 178 ntBASIC1.48□□□□□ -2.17
TCRBV7S3A2A0A539 SNORD123-201ENST00000459473 70 ntBASIC1.48□□□□□ -2.17
TCRBV7S3A2A0A539 RNU6-1270P-201ENST00000517128 108 ntBASIC1.48□□□□□ -2.17
TCRBV7S3A2A0A539 RNU6-902P-201ENST00000517212 91 ntBASIC1.48□□□□□ -2.17
TCRBV7S3A2A0A539 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.48□□□□□ -2.17
TCRBV7S3A2A0A539 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.48□□□□□ -2.17
TCRBV7S3A2A0A539 GHRLOS.1-201ENST00000610995 70 ntBASIC1.48□□□□□ -2.17
TCRBV7S3A2A0A539 Y_RNA.580-201ENST00000391004 95 ntBASIC1.47□□□□□ -2.17
TCRBV7S3A2A0A539 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.47□□□□□ -2.17
TCRBV7S3A2A0A539 RNU7-43P-201ENST00000516554 64 ntBASIC1.47□□□□□ -2.17
TCRBV7S3A2A0A539 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.47□□□□□ -2.17
TCRBV7S3A2A0A539 AL357312.1-201ENST00000603879 298 ntBASIC1.47□□□□□ -2.17
TCRBV7S3A2A0A539 Y_RNA.37-201ENST00000362606 108 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 Y_RNA.272-201ENST00000364696 102 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 RNU6-60P-201ENST00000364792 103 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 Y_RNA.393-201ENST00000383936 102 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 Y_RNA.410-201ENST00000383992 113 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 SNORA1-201ENST00000384107 130 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 Y_RNA.464-201ENST00000384282 110 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 MT-TR-201ENST00000387439 65 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 RNU6-938P-201ENST00000411285 103 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 RPS27P16-201ENST00000425758 201 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 RPL30P7-201ENST00000479312 323 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 RNU6-922P-201ENST00000516753 99 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 SNORA18.7-201ENST00000516910 131 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 MIR3664-201ENST00000579074 99 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 MIR3937-201ENST00000580135 106 ntBASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
TCRBV7S3A2A0A539 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.45□□□□□ -2.18
TCRBV7S3A2A0A539 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TCRBV7S3A2A0A539 SNORA1.2-201ENST00000365189 134 ntBASIC1.45□□□□□ -2.18
TCRBV7S3A2A0A539 SNORD77.3-201ENST00000391113 65 ntBASIC1.45□□□□□ -2.18
TCRBV7S3A2A0A539 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.45□□□□□ -2.18
TCRBV7S3A2A0A539 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.45□□□□□ -2.18
TCRBV7S3A2A0A539 AF228730.3-201ENST00000436691 102 ntBASIC1.45□□□□□ -2.18
TCRBV7S3A2A0A539 RNU6-1212P-201ENST00000517023 104 ntBASIC1.45□□□□□ -2.18
TCRBV7S3A2A0A539 MIR3646-201ENST00000578301 84 ntBASIC1.45□□□□□ -2.18
TCRBV7S3A2A0A539 MIR4285-201ENST00000581001 85 ntBASIC1.45□□□□□ -2.18
TCRBV7S3A2A0A539 MIR548AR-201ENST00000582191 57 ntBASIC1.45□□□□□ -2.18
TCRBV7S3A2A0A539 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.45□□□□□ -2.18
TCRBV7S3A2A0A539 SNORA25.7-201ENST00000364375 127 ntBASIC1.44□□□□□ -2.18
TCRBV7S3A2A0A539 Y_RNA.521-201ENST00000384560 114 ntBASIC1.44□□□□□ -2.18
TCRBV7S3A2A0A539 RNU6-768P-201ENST00000384683 107 ntBASIC1.44□□□□□ -2.18
TCRBV7S3A2A0A539 RPS29P29-201ENST00000456396 171 ntBASIC1.44□□□□□ -2.18
TCRBV7S3A2A0A539 RNU2-13P-201ENST00000515909 113 ntBASIC1.44□□□□□ -2.18
TCRBV7S3A2A0A539 AL512310.8-201ENST00000550183 120 ntBASIC1.44□□□□□ -2.18
TCRBV7S3A2A0A539 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.44□□□□□ -2.18
TCRBV7S3A2A0A539 SNORD115-34-201ENST00000362441 82 ntBASIC1.43□□□□□ -2.18
TCRBV7S3A2A0A539 SNORD115-12-201ENST00000362583 82 ntBASIC1.43□□□□□ -2.18
TCRBV7S3A2A0A539 SNORD115-29-201ENST00000362834 82 ntBASIC1.43□□□□□ -2.18
TCRBV7S3A2A0A539 SNORD115-9-201ENST00000362912 82 ntBASIC1.43□□□□□ -2.18
TCRBV7S3A2A0A539 SNORD115-21-201ENST00000362963 81 ntBASIC1.43□□□□□ -2.18
TCRBV7S3A2A0A539 SNORD115-14-201ENST00000363090 81 ntBASIC1.43□□□□□ -2.18
TCRBV7S3A2A0A539 SNORD115-13-201ENST00000363358 82 ntBASIC1.43□□□□□ -2.18
TCRBV7S3A2A0A539 SNORD115-41-201ENST00000363608 82 ntBASIC1.43□□□□□ -2.18
TCRBV7S3A2A0A539 SNORD115-11-201ENST00000363616 82 ntBASIC1.43□□□□□ -2.18
TCRBV7S3A2A0A539 SNORD115-5-201ENST00000363633 82 ntBASIC1.43□□□□□ -2.18
TCRBV7S3A2A0A539 SNORD115-39-201ENST00000363694 82 ntBASIC1.43□□□□□ -2.18
TCRBV7S3A2A0A539 SNORD115-4-201ENST00000363810 82 ntBASIC1.43□□□□□ -2.18
TCRBV7S3A2A0A539 SNORD115-16-201ENST00000363887 82 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 243.6 ms