Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 RNU6-864P-201ENST00000516256 108 ntBASIC-0.58□□□□□ -2.5
TRAV3A0A0B4J244 RNU7-53P-201ENST00000516705 60 ntBASIC-0.58□□□□□ -2.5
TRAV3A0A0B4J244 RNU6-958P-201ENST00000516995 106 ntBASIC-0.58□□□□□ -2.5
TRAV3A0A0B4J244 RNU6-897P-201ENST00000517135 105 ntBASIC-0.58□□□□□ -2.5
TRAV3A0A0B4J244 AC007751.1-201ENST00000529260 376 ntBASIC-0.58□□□□□ -2.5
TRAV3A0A0B4J244 MIR3925-201ENST00000584674 77 ntBASIC-0.58□□□□□ -2.5
TRAV3A0A0B4J244 AC093424.1-201ENST00000604999 338 ntBASIC-0.58□□□□□ -2.5
TRAV3A0A0B4J244 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.58□□□□□ -2.5
TRAV3A0A0B4J244 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.58□□□□□ -2.5
TRAV3A0A0B4J244 AL359880.1-201ENST00000621879 266 ntBASIC-0.58□□□□□ -2.5
TRAV3A0A0B4J244 SNORD95.1-201ENST00000364099 68 ntBASIC-0.59□□□□□ -2.5
TRAV3A0A0B4J244 RNU4-50P-201ENST00000364361 141 ntBASIC-0.59□□□□□ -2.5
TRAV3A0A0B4J244 RNU6-30P-201ENST00000384561 107 ntBASIC-0.59□□□□□ -2.5
TRAV3A0A0B4J244 RNU6-291P-201ENST00000384720 107 ntBASIC-0.59□□□□□ -2.5
TRAV3A0A0B4J244 SNORD12C-201ENST00000386307 89 ntBASIC-0.59□□□□□ -2.5
TRAV3A0A0B4J244 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
TRAV3A0A0B4J244 SNORA40.5-201ENST00000391061 128 ntBASIC-0.59□□□□□ -2.5
TRAV3A0A0B4J244 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.59□□□□□ -2.5
TRAV3A0A0B4J244 RNU6-437P-201ENST00000459408 95 ntBASIC-0.59□□□□□ -2.5
TRAV3A0A0B4J244 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.59□□□□□ -2.5
TRAV3A0A0B4J244 AL162413.1-201ENST00000603198 110 ntBASIC-0.59□□□□□ -2.5
TRAV3A0A0B4J244 AL670379.3-201ENST00000605040 251 ntBASIC-0.59□□□□□ -2.5
TRAV3A0A0B4J244 U7.6-201ENST00000610841 64 ntBASIC-0.59□□□□□ -2.5
TRAV3A0A0B4J244 RNU6-451P-201ENST00000362921 107 ntBASIC-0.6□□□□□ -2.51
TRAV3A0A0B4J244 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.6□□□□□ -2.51
TRAV3A0A0B4J244 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.6□□□□□ -2.51
TRAV3A0A0B4J244 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.6□□□□□ -2.51
TRAV3A0A0B4J244 SNORD75.1-201ENST00000408373 60 ntBASIC-0.6□□□□□ -2.51
TRAV3A0A0B4J244 RNA5SP118-201ENST00000410385 109 ntBASIC-0.6□□□□□ -2.51
TRAV3A0A0B4J244 AF228730.4-201ENST00000421457 183 ntBASIC-0.6□□□□□ -2.51
TRAV3A0A0B4J244 RNU6-155P-201ENST00000516347 100 ntBASIC-0.6□□□□□ -2.51
TRAV3A0A0B4J244 RNU1-54P-201ENST00000517181 120 ntBASIC-0.6□□□□□ -2.51
TRAV3A0A0B4J244 RNU2-60P-201ENST00000517290 128 ntBASIC-0.6□□□□□ -2.51
TRAV3A0A0B4J244 MIR4677-201ENST00000584153 80 ntBASIC-0.6□□□□□ -2.51
TRAV3A0A0B4J244 NBR2-204ENST00000587322 63 ntBASIC-0.6□□□□□ -2.51
TRAV3A0A0B4J244 AC022441.3-201ENST00000605737 136 ntBASIC-0.6□□□□□ -2.51
TRAV3A0A0B4J244 AL162376.1-201ENST00000624117 175 ntBASIC-0.6□□□□□ -2.51
TRAV3A0A0B4J244 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.61□□□□□ -2.51
TRAV3A0A0B4J244 SNORA75.1-201ENST00000391130 148 ntBASIC-0.61□□□□□ -2.51
TRAV3A0A0B4J244 MIR548O-201ENST00000408583 114 ntBASIC-0.61□□□□□ -2.51
TRAV3A0A0B4J244 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.61□□□□□ -2.51
TRAV3A0A0B4J244 AC096949.1-201ENST00000412047 152 ntBASIC-0.61□□□□□ -2.51
TRAV3A0A0B4J244 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.61□□□□□ -2.51
TRAV3A0A0B4J244 RNU6-956P-201ENST00000458868 103 ntBASIC-0.61□□□□□ -2.51
TRAV3A0A0B4J244 AC138749.4-201ENST00000563970 127 ntBASIC-0.61□□□□□ -2.51
TRAV3A0A0B4J244 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.61□□□□□ -2.51
TRAV3A0A0B4J244 MIR548AY-201ENST00000617669 107 ntBASIC-0.61□□□□□ -2.51
TRAV3A0A0B4J244 uc_338.36-201ENST00000622331 158 ntBASIC-0.61□□□□□ -2.51
TRAV3A0A0B4J244 AC124864.2-201ENST00000624736 186 ntBASIC-0.61□□□□□ -2.51
TRAV3A0A0B4J244 MIR6863-201ENST00000636112 90 ntBASIC-0.61□□□□□ -2.51
TRAV3A0A0B4J244 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 RNY3P3-201ENST00000363816 102 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 RNU6-938P-201ENST00000411285 103 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 AC074085.1-201ENST00000413598 418 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 FCF1P4-201ENST00000448326 183 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 RNU2-11P-201ENST00000459191 187 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 AC091951.2-201ENST00000500762 203 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 AC019235.1-201ENST00000503847 207 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 AL512360.1-201ENST00000555346 234 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 MIR378D2-201ENST00000580636 98 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 AL360085.1-201ENST00000604713 532 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 AL442067.1-201ENST00000613261 223 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 AL596211.1-201ENST00000569873 2277 ntBASIC-0.62□□□□□ -2.51
TRAV3A0A0B4J244 RNU6-726P-201ENST00000364680 107 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 RNU6-20P-201ENST00000384106 107 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 RNU6-332P-201ENST00000391193 108 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 MIR876-201ENST00000401147 81 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 RPS29P24-201ENST00000486345 171 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 AC026782.1-201ENST00000512952 449 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 RNU6-475P-201ENST00000516073 104 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 RNU6-566P-201ENST00000516790 107 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 AP003072.1-201ENST00000531740 145 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 AC024933.1-201ENST00000608472 348 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 uc_338.28-201ENST00000612082 187 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 AC010205.1-201ENST00000616668 449 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 AL662814.1-201ENST00000617364 121 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 FTX_2.1-201ENST00000618816 94 ntBASIC-0.63□□□□□ -2.51
TRAV3A0A0B4J244 MTND5P26-201ENST00000426018 1752 ntBASIC-0.64□□□□□ -2.51
TRAV3A0A0B4J244 MIR655-201ENST00000362159 97 ntBASIC-0.64□□□□□ -2.51
TRAV3A0A0B4J244 SNORD115-24-201ENST00000363528 82 ntBASIC-0.64□□□□□ -2.51
TRAV3A0A0B4J244 U8.15-201ENST00000390947 134 ntBASIC-0.64□□□□□ -2.51
TRAV3A0A0B4J244 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.64□□□□□ -2.51
TRAV3A0A0B4J244 RNU4-63P-201ENST00000411313 118 ntBASIC-0.64□□□□□ -2.51
TRAV3A0A0B4J244 RPL21P38-201ENST00000418090 167 ntBASIC-0.64□□□□□ -2.51
TRAV3A0A0B4J244 MTND4P28-201ENST00000426217 387 ntBASIC-0.64□□□□□ -2.51
TRAV3A0A0B4J244 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-0.64□□□□□ -2.51
TRAV3A0A0B4J244 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.64□□□□□ -2.51
TRAV3A0A0B4J244 MTND3P12-201ENST00000559068 328 ntBASIC-0.64□□□□□ -2.51
TRAV3A0A0B4J244 MIR4491-201ENST00000581087 68 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms