Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 WWP1P1-201ENST00000466609 2769 ntBASIC1.96□□□□□ -2.1
PCDHGA3Q9Y5H0 SNORA2.2-201ENST00000365473 135 ntBASIC1.95□□□□□ -2.1
PCDHGA3Q9Y5H0 SNORD24-201ENST00000383884 75 ntBASIC1.95□□□□□ -2.1
PCDHGA3Q9Y5H0 Y_RNA.412-201ENST00000384001 104 ntBASIC1.95□□□□□ -2.1
PCDHGA3Q9Y5H0 RNU6-484P-201ENST00000384016 107 ntBASIC1.95□□□□□ -2.1
PCDHGA3Q9Y5H0 MIR136-201ENST00000385207 82 ntBASIC1.95□□□□□ -2.1
PCDHGA3Q9Y5H0 SNORD72-201ENST00000390994 80 ntBASIC1.95□□□□□ -2.1
PCDHGA3Q9Y5H0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.95□□□□□ -2.1
PCDHGA3Q9Y5H0 SUMO2P16-201ENST00000519475 264 ntBASIC1.95□□□□□ -2.1
PCDHGA3Q9Y5H0 AC097639.2-201ENST00000603159 172 ntBASIC1.95□□□□□ -2.1
PCDHGA3Q9Y5H0 RNU6-268P-201ENST00000364174 107 ntBASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 Y_RNA.634-201ENST00000364811 113 ntBASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 RNA5SP259-201ENST00000365541 109 ntBASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 Y_RNA.486-201ENST00000384398 107 ntBASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 Y_RNA.555-201ENST00000384673 110 ntBASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 AC015922.2-201ENST00000435593 184 ntBASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 SNRPGP13-201ENST00000442212 177 ntBASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 RNU6-1219P-201ENST00000516143 112 ntBASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 RNU6-830P-201ENST00000516353 107 ntBASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 RNU6-861P-201ENST00000516745 106 ntBASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 MIR4778-201ENST00000577635 80 ntBASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 AC015688.6-201ENST00000577737 104 ntBASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 MIR6845-201ENST00000613182 61 ntBASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 AC095038.3-201ENST00000634439 195 ntBASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PCDHGA3Q9Y5H0 RNU6-643P-201ENST00000384018 107 ntBASIC1.93□□□□□ -2.1
PCDHGA3Q9Y5H0 MIR583-201ENST00000384846 75 ntBASIC1.93□□□□□ -2.1
PCDHGA3Q9Y5H0 AC107027.2-201ENST00000512197 115 ntBASIC1.93□□□□□ -2.1
PCDHGA3Q9Y5H0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.93□□□□□ -2.1
PCDHGA3Q9Y5H0 AC022559.1-201ENST00000520905 205 ntBASIC1.93□□□□□ -2.1
PCDHGA3Q9Y5H0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PCDHGA3Q9Y5H0 RNU6-682P-201ENST00000363843 106 ntBASIC1.92□□□□□ -2.1
PCDHGA3Q9Y5H0 MIR934-201ENST00000401241 83 ntBASIC1.92□□□□□ -2.1
PCDHGA3Q9Y5H0 SNRPGP14-201ENST00000435400 219 ntBASIC1.92□□□□□ -2.1
PCDHGA3Q9Y5H0 HSPE1P24-201ENST00000450782 238 ntBASIC1.92□□□□□ -2.1
PCDHGA3Q9Y5H0 AC093850.1-201ENST00000454121 251 ntBASIC1.92□□□□□ -2.1
PCDHGA3Q9Y5H0 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
PCDHGA3Q9Y5H0 SNORD116-25-201ENST00000516517 92 ntBASIC1.92□□□□□ -2.1
PCDHGA3Q9Y5H0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.92□□□□□ -2.1
PCDHGA3Q9Y5H0 MIR378D2-201ENST00000580636 98 ntBASIC1.92□□□□□ -2.1
PCDHGA3Q9Y5H0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.92□□□□□ -2.1
PCDHGA3Q9Y5H0 AL513534.2-201ENST00000603836 250 ntBASIC1.92□□□□□ -2.1
PCDHGA3Q9Y5H0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.92□□□□□ -2.1
PCDHGA3Q9Y5H0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PCDHGA3Q9Y5H0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.91□□□□□ -2.1
PCDHGA3Q9Y5H0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PCDHGA3Q9Y5H0 SUMO2P12-201ENST00000405924 140 ntBASIC1.91□□□□□ -2.1
PCDHGA3Q9Y5H0 AC090049.2-201ENST00000550377 109 ntBASIC1.91□□□□□ -2.1
PCDHGA3Q9Y5H0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.91□□□□□ -2.1
PCDHGA3Q9Y5H0 MIR4422-201ENST00000581938 83 ntBASIC1.91□□□□□ -2.1
PCDHGA3Q9Y5H0 Y_RNA.783-201ENST00000613546 102 ntBASIC1.91□□□□□ -2.1
PCDHGA3Q9Y5H0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
PCDHGA3Q9Y5H0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
PCDHGA3Q9Y5H0 Y_RNA.337-201ENST00000365312 102 ntBASIC1.9□□□□□ -2.11
PCDHGA3Q9Y5H0 Y_RNA.441-201ENST00000384123 112 ntBASIC1.9□□□□□ -2.11
PCDHGA3Q9Y5H0 MIR653-201ENST00000385279 96 ntBASIC1.9□□□□□ -2.11
PCDHGA3Q9Y5H0 RNU6-1135P-201ENST00000411083 103 ntBASIC1.9□□□□□ -2.11
PCDHGA3Q9Y5H0 AC079140.2-201ENST00000506193 142 ntBASIC1.9□□□□□ -2.11
PCDHGA3Q9Y5H0 RNU6-561P-201ENST00000516222 102 ntBASIC1.9□□□□□ -2.11
PCDHGA3Q9Y5H0 MIR8063-201ENST00000621930 81 ntBASIC1.9□□□□□ -2.11
PCDHGA3Q9Y5H0 RNU6-888P-201ENST00000363010 101 ntBASIC1.89□□□□□ -2.11
PCDHGA3Q9Y5H0 RNU6-457P-201ENST00000363999 107 ntBASIC1.89□□□□□ -2.11
PCDHGA3Q9Y5H0 RNU6-886P-201ENST00000384319 105 ntBASIC1.89□□□□□ -2.11
PCDHGA3Q9Y5H0 RNU6-239P-201ENST00000390990 99 ntBASIC1.89□□□□□ -2.11
PCDHGA3Q9Y5H0 RNU1-78P-201ENST00000391248 165 ntBASIC1.89□□□□□ -2.11
PCDHGA3Q9Y5H0 AL451046.2-201ENST00000403074 277 ntBASIC1.89□□□□□ -2.11
PCDHGA3Q9Y5H0 CYCSP49-201ENST00000420810 319 ntBASIC1.89□□□□□ -2.11
PCDHGA3Q9Y5H0 RNU6-693P-201ENST00000516134 107 ntBASIC1.89□□□□□ -2.11
PCDHGA3Q9Y5H0 AC090142.3-201ENST00000519012 385 ntBASIC1.89□□□□□ -2.11
PCDHGA3Q9Y5H0 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
PCDHGA3Q9Y5H0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
PCDHGA3Q9Y5H0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
PCDHGA3Q9Y5H0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.88□□□□□ -2.11
PCDHGA3Q9Y5H0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.88□□□□□ -2.11
PCDHGA3Q9Y5H0 SNORA1.2-201ENST00000365189 134 ntBASIC1.88□□□□□ -2.11
PCDHGA3Q9Y5H0 RNU6-1067P-201ENST00000384752 107 ntBASIC1.88□□□□□ -2.11
PCDHGA3Q9Y5H0 MIR548O-201ENST00000408583 114 ntBASIC1.88□□□□□ -2.11
PCDHGA3Q9Y5H0 AC006461.1-201ENST00000412637 326 ntBASIC1.88□□□□□ -2.11
PCDHGA3Q9Y5H0 SNX2P2-201ENST00000424553 323 ntBASIC1.88□□□□□ -2.11
PCDHGA3Q9Y5H0 AC087499.4-201ENST00000448505 178 ntBASIC1.88□□□□□ -2.11
PCDHGA3Q9Y5H0 Y_RNA.666-201ENST00000516187 112 ntBASIC1.88□□□□□ -2.11
PCDHGA3Q9Y5H0 AL357312.1-201ENST00000603879 298 ntBASIC1.88□□□□□ -2.11
PCDHGA3Q9Y5H0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.88□□□□□ -2.11
PCDHGA3Q9Y5H0 AL442644.1-201ENST00000454390 3105 ntBASIC1.88□□□□□ -2.11
PCDHGA3Q9Y5H0 RNU1-17P-201ENST00000363022 152 ntBASIC1.87□□□□□ -2.11
PCDHGA3Q9Y5H0 Y_RNA.180-201ENST00000363867 113 ntBASIC1.87□□□□□ -2.11
PCDHGA3Q9Y5H0 RNU4-84P-201ENST00000364200 139 ntBASIC1.87□□□□□ -2.11
PCDHGA3Q9Y5H0 SNORD1A-201ENST00000364968 72 ntBASIC1.87□□□□□ -2.11
PCDHGA3Q9Y5H0 Y_RNA.521-201ENST00000384560 114 ntBASIC1.87□□□□□ -2.11
PCDHGA3Q9Y5H0 Y_RNA.542-201ENST00000384641 111 ntBASIC1.87□□□□□ -2.11
PCDHGA3Q9Y5H0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.87□□□□□ -2.11
PCDHGA3Q9Y5H0 SEPT7P4-201ENST00000437076 306 ntBASIC1.87□□□□□ -2.11
PCDHGA3Q9Y5H0 AC245517.4-201ENST00000448601 281 ntBASIC1.87□□□□□ -2.11
PCDHGA3Q9Y5H0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.87□□□□□ -2.11
PCDHGA3Q9Y5H0 FAM106DP-201ENST00000586416 501 ntBASIC1.87□□□□□ -2.11
PCDHGA3Q9Y5H0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.87□□□□□ -2.11
PCDHGA3Q9Y5H0 AC134878.1-201ENST00000619901 243 ntBASIC1.87□□□□□ -2.11
PCDHGA3Q9Y5H0 AC106754.2-201ENST00000623006 233 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms