Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHB11Q9Y5F2 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.11□□□□□ -1.91
PCDHB11Q9Y5F2 AL590808.1-201ENST00000618696 141 ntBASIC3.11□□□□□ -1.91
PCDHB11Q9Y5F2 AC064859.1-201ENST00000624741 174 ntBASIC3.11□□□□□ -1.91
PCDHB11Q9Y5F2 MIR1245B-201ENST00000636115 69 ntBASIC3.11□□□□□ -1.91
PCDHB11Q9Y5F2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
PCDHB11Q9Y5F2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 RNU6-832P-201ENST00000363319 107 ntBASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 RNU6-1152P-201ENST00000384576 107 ntBASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 RNU6-1319P-201ENST00000390855 104 ntBASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 RNU6-747P-201ENST00000390928 104 ntBASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 RNU6-241P-201ENST00000391148 104 ntBASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 RNU6-177P-201ENST00000411257 104 ntBASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 AC096949.1-201ENST00000412047 152 ntBASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 RPL32P35-201ENST00000415214 394 ntBASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 RNU7-113P-201ENST00000459273 62 ntBASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 MIR2682-201ENST00000580305 110 ntBASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHB11Q9Y5F2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHB11Q9Y5F2 SNORA80A-201ENST00000363922 136 ntBASIC3.09□□□□□ -1.91
PCDHB11Q9Y5F2 RNU6-573P-201ENST00000383938 106 ntBASIC3.09□□□□□ -1.91
PCDHB11Q9Y5F2 SNORA70.7-201ENST00000384159 133 ntBASIC3.09□□□□□ -1.91
PCDHB11Q9Y5F2 RN7SKP220-201ENST00000410611 288 ntBASIC3.09□□□□□ -1.91
PCDHB11Q9Y5F2 AC022018.1-201ENST00000430685 241 ntBASIC3.09□□□□□ -1.91
PCDHB11Q9Y5F2 RNU7-45P-201ENST00000459460 63 ntBASIC3.09□□□□□ -1.91
PCDHB11Q9Y5F2 AL137790.1-201ENST00000634283 177 ntBASIC3.09□□□□□ -1.91
PCDHB11Q9Y5F2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 MIR148B-201ENST00000362252 99 ntBASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 SNORD115-2-201ENST00000362842 82 ntBASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 Y_RNA.171-201ENST00000363760 102 ntBASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 Y_RNA.290-201ENST00000364879 114 ntBASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 SNORD115-20-201ENST00000365099 82 ntBASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 MIR452-201ENST00000385020 85 ntBASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 RNU6-592P-201ENST00000411333 103 ntBASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 AC004941.2-201ENST00000427009 228 ntBASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 RNU7-61P-201ENST00000515897 61 ntBASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 RNU7-12P-201ENST00000516030 62 ntBASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 MIR3126-201ENST00000577443 74 ntBASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
PCDHB11Q9Y5F2 MIR494-201ENST00000349529 81 ntBASIC3.07□□□□□ -1.92
PCDHB11Q9Y5F2 Y_RNA.370-201ENST00000365589 108 ntBASIC3.07□□□□□ -1.92
PCDHB11Q9Y5F2 RNU1-148P-201ENST00000384472 162 ntBASIC3.07□□□□□ -1.92
PCDHB11Q9Y5F2 RNU6-1258P-201ENST00000516911 111 ntBASIC3.07□□□□□ -1.92
PCDHB11Q9Y5F2 MIR3152-201ENST00000579801 74 ntBASIC3.07□□□□□ -1.92
PCDHB11Q9Y5F2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHB11Q9Y5F2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHB11Q9Y5F2 AC012531.4-201ENST00000616509 177 ntBASIC3.07□□□□□ -1.92
PCDHB11Q9Y5F2 MIR6841-201ENST00000637129 72 ntBASIC3.07□□□□□ -1.92
PCDHB11Q9Y5F2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHB11Q9Y5F2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
PCDHB11Q9Y5F2 AC096644.4-201ENST00000563417 2912 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 RNU6-170P-201ENST00000362832 104 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 RNU1-91P-201ENST00000364746 163 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 RNU6-1031P-201ENST00000384773 107 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 MIR597-201ENST00000384968 97 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 MIR605-201ENST00000385078 83 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 MIR516B2-201ENST00000385190 85 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 RN7SKP192-201ENST00000411291 327 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 AL353813.1-201ENST00000440700 253 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 RNU6-795P-201ENST00000516323 103 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 RNU6-638P-201ENST00000516582 104 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 RNU7-53P-201ENST00000516705 60 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 RNA5SP137-201ENST00000516833 135 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 AC245166.1-201ENST00000521012 253 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 AC103810.6-201ENST00000606708 136 ntBASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
PCDHB11Q9Y5F2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHB11Q9Y5F2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHB11Q9Y5F2 SNORA22.1-201ENST00000362701 134 ntBASIC3.05□□□□□ -1.92
PCDHB11Q9Y5F2 MIR136-201ENST00000385207 82 ntBASIC3.05□□□□□ -1.92
PCDHB11Q9Y5F2 RNU11-3P-201ENST00000391111 133 ntBASIC3.05□□□□□ -1.92
PCDHB11Q9Y5F2 Y_RNA.593-201ENST00000410292 98 ntBASIC3.05□□□□□ -1.92
PCDHB11Q9Y5F2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHB11Q9Y5F2 Z96811.1-201ENST00000445880 108 ntBASIC3.05□□□□□ -1.92
PCDHB11Q9Y5F2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHB11Q9Y5F2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHB11Q9Y5F2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.05□□□□□ -1.92
PCDHB11Q9Y5F2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHB11Q9Y5F2 RNY1P10-201ENST00000363268 113 ntBASIC3.04□□□□□ -1.92
PCDHB11Q9Y5F2 SNORA71.1-201ENST00000364523 117 ntBASIC3.04□□□□□ -1.92
PCDHB11Q9Y5F2 SNORA24-201ENST00000384096 131 ntBASIC3.04□□□□□ -1.92
PCDHB11Q9Y5F2 SNORA44-201ENST00000384584 132 ntBASIC3.04□□□□□ -1.92
PCDHB11Q9Y5F2 RNU6-679P-201ENST00000391003 106 ntBASIC3.04□□□□□ -1.92
PCDHB11Q9Y5F2 SNORD77B-201ENST00000391112 67 ntBASIC3.04□□□□□ -1.92
PCDHB11Q9Y5F2 RNU6-644P-201ENST00000391155 98 ntBASIC3.04□□□□□ -1.92
PCDHB11Q9Y5F2 RNA5SP261-201ENST00000410536 106 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 309.4 ms