Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 MIR103A2-201ENST00000362154 78 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 RNA5SP48-201ENST00000363969 126 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 RNU6-268P-201ENST00000364174 107 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 RNU6-450P-201ENST00000364654 107 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 RNU6-442P-201ENST00000383968 104 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 AL603910.2-201ENST00000407268 136 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 MIR1302-7-201ENST00000408841 72 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 RNU6-121P-201ENST00000410525 99 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 Y_RNA.631-201ENST00000459607 101 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 RNU6-764P-201ENST00000516396 105 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 RPL23AP91-201ENST00000569211 455 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 MIR2681-201ENST00000581814 105 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 MIR548AR-201ENST00000582191 57 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.66□□□□□ -2.3
CDC42EP4Q9H3Q1 AC134026.1-201ENST00000623249 2239 ntBASIC0.65□□□□□ -2.3
CDC42EP4Q9H3Q1 SNORD38C-201ENST00000384381 69 ntBASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 SNORD28B-201ENST00000390993 75 ntBASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 SNORD72-201ENST00000390994 80 ntBASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.581-201ENST00000391017 97 ntBASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.602-201ENST00000410535 92 ntBASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 AL392103.1-201ENST00000447000 198 ntBASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 PDCD5P2-201ENST00000507570 312 ntBASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 PSMC1P5-201ENST00000512850 177 ntBASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 AC004817.2-201ENST00000561794 651 ntBASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 AC131055.1-201ENST00000584626 316 ntBASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 AC008133.2-201ENST00000624540 351 ntBASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.31
CDC42EP4Q9H3Q1 RNU4-90P-201ENST00000362773 141 ntBASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 RNU5E-4P-201ENST00000364931 120 ntBASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 RNU6-867P-201ENST00000364956 107 ntBASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.460-201ENST00000384255 102 ntBASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.535-201ENST00000384612 99 ntBASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 RNU6-763P-201ENST00000390865 106 ntBASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 MTCO1P5-201ENST00000433573 344 ntBASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.637-201ENST00000459424 114 ntBASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 RNA5SP255-201ENST00000516370 107 ntBASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.721-201ENST00000517207 102 ntBASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 DEFB108E-201ENST00000524692 240 ntBASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 AP003484.1-201ENST00000530974 250 ntBASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 AC006441.5-201ENST00000612680 209 ntBASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 Pinc.1-201ENST00000616452 154 ntBASIC0.64□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.61-201ENST00000362835 102 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.128-201ENST00000363391 112 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.138-201ENST00000363462 102 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 RNU6-899P-201ENST00000363947 107 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.380-201ENST00000365663 111 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.389-201ENST00000383924 113 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.569-201ENST00000384749 103 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 MIR942-201ENST00000401111 86 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 MTCO2P33-201ENST00000402100 465 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 RNU6-101P-201ENST00000410323 104 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 RNU2-64P-201ENST00000411315 191 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 MRPS35P2-201ENST00000508242 191 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 RNU11-2P-201ENST00000516898 142 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.711-201ENST00000516993 102 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 MIR6513-201ENST00000621188 64 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 AC134503.1-201ENST00000633048 54 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 MIR4251-201ENST00000635819 61 ntBASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CDC42EP4Q9H3Q1 snoU2_19.2-201ENST00000363024 80 ntBASIC0.62□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.330-201ENST00000365230 109 ntBASIC0.62□□□□□ -2.31
CDC42EP4Q9H3Q1 SNORA22B-201ENST00000383876 138 ntBASIC0.62□□□□□ -2.31
CDC42EP4Q9H3Q1 RNU6-144P-201ENST00000383951 107 ntBASIC0.62□□□□□ -2.31
CDC42EP4Q9H3Q1 U8.17-201ENST00000391292 132 ntBASIC0.62□□□□□ -2.31
CDC42EP4Q9H3Q1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.62□□□□□ -2.31
CDC42EP4Q9H3Q1 ELOCP20-201ENST00000422460 345 ntBASIC0.62□□□□□ -2.31
CDC42EP4Q9H3Q1 RNU6-197P-201ENST00000516680 100 ntBASIC0.62□□□□□ -2.31
CDC42EP4Q9H3Q1 RNU6-988P-201ENST00000519081 107 ntBASIC0.62□□□□□ -2.31
CDC42EP4Q9H3Q1 AC109810.1-201ENST00000534066 224 ntBASIC0.62□□□□□ -2.31
CDC42EP4Q9H3Q1 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
CDC42EP4Q9H3Q1 AL021707.8-201ENST00000609428 183 ntBASIC0.62□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.214-201ENST00000364201 112 ntBASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.276-201ENST00000364732 109 ntBASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 RNU6-290P-201ENST00000365212 101 ntBASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 MIR802-201ENST00000390235 94 ntBASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 AC005534.2-201ENST00000431047 433 ntBASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 RNU4-57P-201ENST00000515980 135 ntBASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 AC036111.3-201ENST00000526389 112 ntBASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 AC023827.1-201ENST00000569247 97 ntBASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 AC013791.1-201ENST00000616619 62 ntBASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 AC022140.2-201ENST00000623500 188 ntBASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 MIR6516-201ENST00000630554 81 ntBASIC0.61□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.158-201ENST00000363651 101 ntBASIC0.6□□□□□ -2.31
CDC42EP4Q9H3Q1 Y_RNA.541-201ENST00000384640 113 ntBASIC0.6□□□□□ -2.31
CDC42EP4Q9H3Q1 MIR608-201ENST00000384820 100 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms