Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 AC006023.1-201ENST00000603944 259 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 AL662814.1-201ENST00000617364 121 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 MIR6500-201ENST00000622700 86 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 MIR4251-201ENST00000635819 61 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 MIR492-201ENST00000638676 116 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 AL161431.1-201ENST00000618966 4205 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 RPL18P10-201ENST00000425606 538 ntBASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 AC091390.1-201ENST00000433904 331 ntBASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 SNRPGP12-201ENST00000449481 213 ntBASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 AC011753.1-201ENST00000451001 220 ntBASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 RN7SL442P-201ENST00000473804 320 ntBASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 Y_RNA.660-201ENST00000516002 120 ntBASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 MRPL49P2-201ENST00000521066 465 ntBASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 AC090897.1-201ENST00000580909 226 ntBASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 AP000553.6-201ENST00000641242 118 ntBASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP3-1Q9BYR8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 AC027290.2-201ENST00000623210 18662 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-686P-201ENST00000364839 107 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 SNORA25.9-201ENST00000365087 128 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-949P-201ENST00000384040 107 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 Y_RNA.508-201ENST00000384502 114 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 RNA5SP317-201ENST00000410176 116 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 RN7SKP27-201ENST00000410684 333 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 RNA5SP311-201ENST00000411290 116 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 Z96811.1-201ENST00000445880 108 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 Y_RNA.648-201ENST00000459455 110 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 RPS27P21-201ENST00000486977 252 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 RN7SL323P-201ENST00000494712 295 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 FGF7P7-201ENST00000514120 227 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-322P-201ENST00000516010 103 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-871P-201ENST00000516122 100 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 RNA5SP315-201ENST00000516340 116 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 SNORA31.9-201ENST00000516429 84 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 RNA5SP312-201ENST00000517068 116 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 AC034105.4-201ENST00000568304 277 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 MIR4796-201ENST00000580742 81 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP3-1Q9BYR8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 MIR372-201ENST00000362225 67 ntBASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 MIRLET7A1-201ENST00000362295 80 ntBASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-1123P-201ENST00000362347 106 ntBASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU1-138P-201ENST00000384093 164 ntBASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-411P-201ENST00000384451 107 ntBASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 SNORA72.6-201ENST00000384520 129 ntBASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 SNORA40.18-201ENST00000391200 128 ntBASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 RNA5SP501-201ENST00000410990 112 ntBASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU2-27P-201ENST00000516185 142 ntBASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-917P-201ENST00000516294 104 ntBASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-539P-201ENST00000516665 103 ntBASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP3-1Q9BYR8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 WWP1P1-201ENST00000466609 2769 ntBASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 RNA5SP48-201ENST00000363969 126 ntBASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU1-51P-201ENST00000365345 176 ntBASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-571P-201ENST00000384128 107 ntBASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 MIR30B-201ENST00000384850 88 ntBASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU7-85P-201ENST00000458851 63 ntBASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-850P-201ENST00000516934 103 ntBASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 AC104027.1-201ENST00000521887 300 ntBASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 MIR5187-201ENST00000583479 76 ntBASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC1.79□□□□□ -2.12
KRTAP3-1Q9BYR8 U1.36-201ENST00000620684 176 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms