Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC108081.1-201ENST00000604358 221 ntBASIC1.99□□□□□ -2.09
TIMP4Q99727 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.99□□□□□ -2.09
TIMP4Q99727 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.99□□□□□ -2.09
TIMP4Q99727 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.99□□□□□ -2.09
TIMP4Q99727 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TIMP4Q99727 Y_RNA.242-201ENST00000364473 110 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 RNU6-1292P-201ENST00000383856 107 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 RNU6-442P-201ENST00000383968 104 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 RNU6-429P-201ENST00000384582 108 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 RNU6-476P-201ENST00000384726 107 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 MIR518F-201ENST00000384973 87 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 MIR548O-201ENST00000408583 114 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 RNA5SP338-201ENST00000410495 85 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.98□□□□□ -2.09
TIMP4Q99727 snoU13.26-201ENST00000459452 105 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 RNA5SP200-201ENST00000516360 103 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 RNU6-781P-201ENST00000516377 101 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 RNU7-193P-201ENST00000516723 65 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 RNU6-1149P-201ENST00000516810 97 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 RNU6-1116P-201ENST00000517269 99 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 IGKV3-31-201ENST00000523109 329 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.98□□□□□ -2.09
TIMP4Q99727 AC121758.2-201ENST00000553271 193 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 MIR5694-201ENST00000581190 76 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 AC009831.4-201ENST00000620744 325 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 MIR8054-201ENST00000620877 86 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 MIR3914-2-201ENST00000637339 95 ntBASIC1.98□□□□□ -2.09
TIMP4Q99727 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
TIMP4Q99727 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
TIMP4Q99727 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TIMP4Q99727 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TIMP4Q99727 MIRLET7G-201ENST00000362280 84 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 RNU6-834P-201ENST00000362367 110 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 RNU6-647P-201ENST00000364243 107 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 SNORA16B-201ENST00000364674 135 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 Y_RNA.280-201ENST00000364765 112 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 SNORA64-201ENST00000384674 134 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 RNA5SP482-201ENST00000391269 118 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 HMGN2P3-201ENST00000433603 273 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.97□□□□□ -2.09
TIMP4Q99727 HMGN2P5-201ENST00000436882 273 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 Y_RNA.651-201ENST00000459380 103 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 RNU7-25P-201ENST00000516544 62 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 AC104984.5-201ENST00000586878 94 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 AC069114.2-201ENST00000604699 304 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 MIR6715A-201ENST00000615929 79 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 MIR6132-201ENST00000622083 109 ntBASIC1.97□□□□□ -2.09
TIMP4Q99727 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TIMP4Q99727 RNU6-268P-201ENST00000364174 107 ntBASIC1.96□□□□□ -2.1
TIMP4Q99727 RNU6-1019P-201ENST00000364424 107 ntBASIC1.96□□□□□ -2.1
TIMP4Q99727 U8.5-201ENST00000364528 136 ntBASIC1.96□□□□□ -2.1
TIMP4Q99727 RNU6-163P-201ENST00000384396 106 ntBASIC1.96□□□□□ -2.1
TIMP4Q99727 AL021397.1-201ENST00000451806 248 ntBASIC1.96□□□□□ -2.1
TIMP4Q99727 SNORA31.10-201ENST00000516482 106 ntBASIC1.96□□□□□ -2.1
TIMP4Q99727 MIR4762-201ENST00000585261 75 ntBASIC1.96□□□□□ -2.1
TIMP4Q99727 MIR376A2-201ENST00000636782 80 ntBASIC1.96□□□□□ -2.1
TIMP4Q99727 MIR219B-201ENST00000637023 88 ntBASIC1.96□□□□□ -2.1
TIMP4Q99727 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TIMP4Q99727 SNORD58C-201ENST00000365223 64 ntBASIC1.95□□□□□ -2.1
TIMP4Q99727 RNU6-1144P-201ENST00000384247 104 ntBASIC1.95□□□□□ -2.1
TIMP4Q99727 SNORA67.3-201ENST00000384366 140 ntBASIC1.95□□□□□ -2.1
TIMP4Q99727 Y_RNA.547-201ENST00000384654 119 ntBASIC1.95□□□□□ -2.1
TIMP4Q99727 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.95□□□□□ -2.1
TIMP4Q99727 AC114811.1-201ENST00000507207 168 ntBASIC1.95□□□□□ -2.1
TIMP4Q99727 SNORD33.1-201ENST00000516213 88 ntBASIC1.95□□□□□ -2.1
TIMP4Q99727 SCARNA16.3-201ENST00000516595 184 ntBASIC1.95□□□□□ -2.1
TIMP4Q99727 RNU7-28P-201ENST00000516759 62 ntBASIC1.95□□□□□ -2.1
TIMP4Q99727 MIR6840-201ENST00000611937 71 ntBASIC1.95□□□□□ -2.1
TIMP4Q99727 AC006441.5-201ENST00000612680 209 ntBASIC1.95□□□□□ -2.1
TIMP4Q99727 AC015726.2-201ENST00000620112 122 ntBASIC1.95□□□□□ -2.1
TIMP4Q99727 MIR203B-201ENST00000636080 86 ntBASIC1.95□□□□□ -2.1
TIMP4Q99727 U6.95-201ENST00000636931 70 ntBASIC1.95□□□□□ -2.1
TIMP4Q99727 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
TIMP4Q99727 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TIMP4Q99727 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
TIMP4Q99727 SNORA63.4-201ENST00000362763 126 ntBASIC1.94□□□□□ -2.1
TIMP4Q99727 SNORD115-28-201ENST00000363931 81 ntBASIC1.94□□□□□ -2.1
TIMP4Q99727 SNORA48.3-201ENST00000391081 134 ntBASIC1.94□□□□□ -2.1
TIMP4Q99727 AL023284.1-201ENST00000403956 276 ntBASIC1.94□□□□□ -2.1
TIMP4Q99727 MIR1263-201ENST00000408324 86 ntBASIC1.94□□□□□ -2.1
TIMP4Q99727 Y_RNA.617-201ENST00000410920 90 ntBASIC1.94□□□□□ -2.1
TIMP4Q99727 HSPE1P9-201ENST00000440046 311 ntBASIC1.94□□□□□ -2.1
TIMP4Q99727 RNU6-717P-201ENST00000459076 104 ntBASIC1.94□□□□□ -2.1
TIMP4Q99727 RN7SKP19-201ENST00000516016 252 ntBASIC1.94□□□□□ -2.1
TIMP4Q99727 RNA5SP236-201ENST00000516169 116 ntBASIC1.94□□□□□ -2.1
TIMP4Q99727 RNVU1-2-201ENST00000516326 135 ntBASIC1.94□□□□□ -2.1
TIMP4Q99727 RNA5SP137-201ENST00000516833 135 ntBASIC1.94□□□□□ -2.1
TIMP4Q99727 AC134878.1-201ENST00000619901 243 ntBASIC1.94□□□□□ -2.1
TIMP4Q99727 AL121890.5-201ENST00000620848 304 ntBASIC1.94□□□□□ -2.1
TIMP4Q99727 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.94□□□□□ -2.1
TIMP4Q99727 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.94□□□□□ -2.1
TIMP4Q99727 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TIMP4Q99727 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TIMP4Q99727 SNORD114-1-201ENST00000362705 72 ntBASIC1.93□□□□□ -2.1
TIMP4Q99727 SNORA4.2-201ENST00000365313 147 ntBASIC1.93□□□□□ -2.1
TIMP4Q99727 SNORA2.2-201ENST00000365473 135 ntBASIC1.93□□□□□ -2.1
TIMP4Q99727 SNORA6-201ENST00000384033 151 ntBASIC1.93□□□□□ -2.1
TIMP4Q99727 MIR518A2-201ENST00000384966 87 ntBASIC1.93□□□□□ -2.1
TIMP4Q99727 MIR548A3-201ENST00000385297 97 ntBASIC1.93□□□□□ -2.1
TIMP4Q99727 MIR1283-2-201ENST00000408621 87 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 191.6 ms