Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MIR4672-201ENST00000583126 81 ntBASIC2.4□□□□□ -2.03
PTCHD1Q96NR3 FO624990.1-201ENST00000636373 85 ntBASIC2.4□□□□□ -2.03
PTCHD1Q96NR3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PTCHD1Q96NR3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PTCHD1Q96NR3 RNU6-690P-201ENST00000365242 106 ntBASIC2.39□□□□□ -2.03
PTCHD1Q96NR3 RNU6-424P-201ENST00000384367 105 ntBASIC2.39□□□□□ -2.03
PTCHD1Q96NR3 MIR520A-201ENST00000384862 85 ntBASIC2.39□□□□□ -2.03
PTCHD1Q96NR3 MIR27B-201ENST00000385129 97 ntBASIC2.39□□□□□ -2.03
PTCHD1Q96NR3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PTCHD1Q96NR3 RNU2-7P-201ENST00000410794 178 ntBASIC2.39□□□□□ -2.03
PTCHD1Q96NR3 RNA5SP168-201ENST00000516642 112 ntBASIC2.39□□□□□ -2.03
PTCHD1Q96NR3 AL049779.4-201ENST00000604500 156 ntBASIC2.39□□□□□ -2.03
PTCHD1Q96NR3 MIR203B-201ENST00000636080 86 ntBASIC2.39□□□□□ -2.03
PTCHD1Q96NR3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
PTCHD1Q96NR3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
PTCHD1Q96NR3 RNU6-833P-201ENST00000363486 107 ntBASIC2.38□□□□□ -2.03
PTCHD1Q96NR3 RNU1-133P-201ENST00000364867 167 ntBASIC2.38□□□□□ -2.03
PTCHD1Q96NR3 Y_RNA.351-201ENST00000365436 96 ntBASIC2.38□□□□□ -2.03
PTCHD1Q96NR3 RNU6-1031P-201ENST00000384773 107 ntBASIC2.38□□□□□ -2.03
PTCHD1Q96NR3 AC015922.2-201ENST00000435593 184 ntBASIC2.38□□□□□ -2.03
PTCHD1Q96NR3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.38□□□□□ -2.03
PTCHD1Q96NR3 RNU6-830P-201ENST00000516353 107 ntBASIC2.38□□□□□ -2.03
PTCHD1Q96NR3 SUB1P4-201ENST00000566062 339 ntBASIC2.38□□□□□ -2.03
PTCHD1Q96NR3 MIR4435-1-201ENST00000582552 80 ntBASIC2.38□□□□□ -2.03
PTCHD1Q96NR3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.38□□□□□ -2.03
PTCHD1Q96NR3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.38□□□□□ -2.03
PTCHD1Q96NR3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
PTCHD1Q96NR3 RNU6-349P-201ENST00000362402 107 ntBASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 SNORA25.6-201ENST00000364121 118 ntBASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 MIR570-201ENST00000384917 97 ntBASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 RNA5SP501-201ENST00000410990 112 ntBASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 RNA5SP270-201ENST00000411361 118 ntBASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 RNU7-80P-201ENST00000459562 61 ntBASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 COX6CP6-201ENST00000490840 228 ntBASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 RNA5SP320-201ENST00000516263 124 ntBASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 RNA5SP437-201ENST00000517249 129 ntBASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 MIR5092-201ENST00000583139 88 ntBASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 AC002984.1-201ENST00000591692 448 ntBASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 AC245884.12-201ENST00000615364 59 ntBASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 U4.3-201ENST00000621047 82 ntBASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.37□□□□□ -2.03
PTCHD1Q96NR3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PTCHD1Q96NR3 RNU1-138P-201ENST00000384093 164 ntBASIC2.36□□□□□ -2.03
PTCHD1Q96NR3 RNY1P6-201ENST00000384193 109 ntBASIC2.36□□□□□ -2.03
PTCHD1Q96NR3 AL627390.1-201ENST00000396055 340 ntBASIC2.36□□□□□ -2.03
PTCHD1Q96NR3 AC011753.1-201ENST00000451001 220 ntBASIC2.36□□□□□ -2.03
PTCHD1Q96NR3 RPL23AP63-201ENST00000498752 471 ntBASIC2.36□□□□□ -2.03
PTCHD1Q96NR3 RPL23AP94-201ENST00000512518 302 ntBASIC2.36□□□□□ -2.03
PTCHD1Q96NR3 RNU7-12P-201ENST00000516030 62 ntBASIC2.36□□□□□ -2.03
PTCHD1Q96NR3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.36□□□□□ -2.03
PTCHD1Q96NR3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PTCHD1Q96NR3 SNORD14A-201ENST00000606526 91 ntBASIC2.36□□□□□ -2.03
PTCHD1Q96NR3 RNU6-112P-201ENST00000363599 104 ntBASIC2.35□□□□□ -2.03
PTCHD1Q96NR3 Y_RNA.454-201ENST00000384224 113 ntBASIC2.35□□□□□ -2.03
PTCHD1Q96NR3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.35□□□□□ -2.03
PTCHD1Q96NR3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.35□□□□□ -2.03
PTCHD1Q96NR3 RNU7-34P-201ENST00000459394 64 ntBASIC2.35□□□□□ -2.03
PTCHD1Q96NR3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.35□□□□□ -2.03
PTCHD1Q96NR3 AC007336.1-201ENST00000576365 3828 ntBASIC2.35□□□□□ -2.03
PTCHD1Q96NR3 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.35□□□□□ -2.03
PTCHD1Q96NR3 AC091932.4-201ENST00000623386 200 ntBASIC2.35□□□□□ -2.03
PTCHD1Q96NR3 AL596211.1-201ENST00000569873 2277 ntBASIC2.35□□□□□ -2.03
PTCHD1Q96NR3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
PTCHD1Q96NR3 MIR449A-201ENST00000362113 91 ntBASIC2.34□□□□□ -2.03
PTCHD1Q96NR3 Y_RNA.241-201ENST00000364470 117 ntBASIC2.34□□□□□ -2.03
PTCHD1Q96NR3 DEFA7P-201ENST00000382676 285 ntBASIC2.34□□□□□ -2.03
PTCHD1Q96NR3 RNU6-147P-201ENST00000383983 107 ntBASIC2.34□□□□□ -2.03
PTCHD1Q96NR3 RNU6-296P-201ENST00000384608 107 ntBASIC2.34□□□□□ -2.03
PTCHD1Q96NR3 AC007012.1-201ENST00000567192 175 ntBASIC2.34□□□□□ -2.03
PTCHD1Q96NR3 AC078899.2-201ENST00000595282 212 ntBASIC2.34□□□□□ -2.03
PTCHD1Q96NR3 AC021443.1-201ENST00000604478 211 ntBASIC2.34□□□□□ -2.03
PTCHD1Q96NR3 AC008555.8-201ENST00000623602 2168 ntBASIC2.34□□□□□ -2.04
PTCHD1Q96NR3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PTCHD1Q96NR3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTCHD1Q96NR3 RNU1-51P-201ENST00000365345 176 ntBASIC2.33□□□□□ -2.04
PTCHD1Q96NR3 SNORA27-201ENST00000384323 126 ntBASIC2.33□□□□□ -2.04
PTCHD1Q96NR3 SNX2P2-201ENST00000424553 323 ntBASIC2.33□□□□□ -2.04
PTCHD1Q96NR3 AL513328.1-201ENST00000446460 224 ntBASIC2.33□□□□□ -2.04
PTCHD1Q96NR3 RNY4P20-201ENST00000516678 93 ntBASIC2.33□□□□□ -2.04
PTCHD1Q96NR3 MIR4709-201ENST00000577272 72 ntBASIC2.33□□□□□ -2.04
PTCHD1Q96NR3 MIR4778-201ENST00000577635 80 ntBASIC2.33□□□□□ -2.04
PTCHD1Q96NR3 MIR3613-201ENST00000579844 87 ntBASIC2.33□□□□□ -2.04
PTCHD1Q96NR3 AC021506.2-201ENST00000612354 169 ntBASIC2.33□□□□□ -2.04
PTCHD1Q96NR3 U1.36-201ENST00000620684 176 ntBASIC2.33□□□□□ -2.04
PTCHD1Q96NR3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTCHD1Q96NR3 AL442644.1-201ENST00000454390 3105 ntBASIC2.33□□□□□ -2.04
PTCHD1Q96NR3 MIR342-201ENST00000362212 99 ntBASIC2.32□□□□□ -2.04
PTCHD1Q96NR3 RNA5SP456-201ENST00000364002 114 ntBASIC2.32□□□□□ -2.04
PTCHD1Q96NR3 Y_RNA.198-201ENST00000364013 98 ntBASIC2.32□□□□□ -2.04
PTCHD1Q96NR3 MIR452-201ENST00000385020 85 ntBASIC2.32□□□□□ -2.04
PTCHD1Q96NR3 U8.17-201ENST00000391292 132 ntBASIC2.32□□□□□ -2.04
PTCHD1Q96NR3 snoU13.27-201ENST00000459278 104 ntBASIC2.32□□□□□ -2.04
PTCHD1Q96NR3 RNU6-412P-201ENST00000516434 106 ntBASIC2.32□□□□□ -2.04
PTCHD1Q96NR3 RNA5SP481-201ENST00000516814 122 ntBASIC2.32□□□□□ -2.04
PTCHD1Q96NR3 RNU7-181P-201ENST00000517234 74 ntBASIC2.32□□□□□ -2.04
PTCHD1Q96NR3 MIR4298-201ENST00000584380 73 ntBASIC2.32□□□□□ -2.04
PTCHD1Q96NR3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PTCHD1Q96NR3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PTCHD1Q96NR3 SNORD115-34-201ENST00000362441 82 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms