Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 Y_RNA.306-201ENST00000365015 102 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.312-201ENST00000365089 102 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.322-201ENST00000365151 102 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 SNORA1.2-201ENST00000365189 134 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.459-201ENST00000384251 102 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.518-201ENST00000384552 113 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 MIR626-201ENST00000385032 94 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 CYCSP49-201ENST00000420810 319 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.12□□□□□ -2.23
CMTM3Q96MX0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.12□□□□□ -2.23
CMTM3Q96MX0 SNORD2.1-201ENST00000458762 69 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.650-201ENST00000459002 102 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 RNU7-90P-201ENST00000459216 62 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 RNU4-57P-201ENST00000515980 135 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.777-201ENST00000516982 102 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 MIR4662B-201ENST00000579498 81 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.771-201ENST00000598668 102 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.789-201ENST00000622480 102 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 MIR4251-201ENST00000635819 61 ntBASIC1.12□□□□□ -2.23
CMTM3Q96MX0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CMTM3Q96MX0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
CMTM3Q96MX0 SNORA25.3-201ENST00000363205 127 ntBASIC1.11□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.587-201ENST00000391210 103 ntBASIC1.11□□□□□ -2.23
CMTM3Q96MX0 MIR1185-1-201ENST00000408598 86 ntBASIC1.11□□□□□ -2.23
CMTM3Q96MX0 RNU7-181P-201ENST00000517234 74 ntBASIC1.11□□□□□ -2.23
CMTM3Q96MX0 MIR6715A-201ENST00000615929 79 ntBASIC1.11□□□□□ -2.23
CMTM3Q96MX0 RNU6-472P-201ENST00000384299 107 ntBASIC1.1□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.547-201ENST00000384654 119 ntBASIC1.1□□□□□ -2.23
CMTM3Q96MX0 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
CMTM3Q96MX0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.1□□□□□ -2.23
CMTM3Q96MX0 RNU6-126P-201ENST00000516685 103 ntBASIC1.1□□□□□ -2.23
CMTM3Q96MX0 RNU11-2P-201ENST00000516898 142 ntBASIC1.1□□□□□ -2.23
CMTM3Q96MX0 AC015712.3-201ENST00000559380 164 ntBASIC1.1□□□□□ -2.23
CMTM3Q96MX0 AL512598.1-201ENST00000610158 273 ntBASIC1.1□□□□□ -2.23
CMTM3Q96MX0 SEPT14P17-201ENST00000617978 177 ntBASIC1.1□□□□□ -2.23
CMTM3Q96MX0 ZNF209P-201ENST00000593450 2304 ntBASIC1.1□□□□□ -2.23
CMTM3Q96MX0 AL391516.1-201ENST00000554380 2449 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.47-201ENST00000362697 108 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 RNU1-17P-201ENST00000363022 152 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.149-201ENST00000363558 117 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.229-201ENST00000364347 113 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.370-201ENST00000365589 108 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.486-201ENST00000384398 107 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.537-201ENST00000384626 109 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 MIR548O-201ENST00000408583 114 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.590-201ENST00000410140 107 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.09□□□□□ -2.23
CMTM3Q96MX0 AL358176.2-201ENST00000425769 204 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.09□□□□□ -2.23
CMTM3Q96MX0 RNU1-123P-201ENST00000458950 160 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 RNU7-25P-201ENST00000516544 62 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 AC100767.1-201ENST00000528178 123 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 MIR4524B-201ENST00000581569 115 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 MIR4298-201ENST00000584380 73 ntBASIC1.09□□□□□ -2.23
CMTM3Q96MX0 Y_RNA.572-201ENST00000384757 98 ntBASIC1.08□□□□□ -2.24
CMTM3Q96MX0 MIR200A-201ENST00000384875 90 ntBASIC1.08□□□□□ -2.24
CMTM3Q96MX0 MIR570-201ENST00000384917 97 ntBASIC1.08□□□□□ -2.24
CMTM3Q96MX0 RNU6-651P-201ENST00000411040 105 ntBASIC1.08□□□□□ -2.24
CMTM3Q96MX0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.08□□□□□ -2.24
CMTM3Q96MX0 Y_RNA.666-201ENST00000516187 112 ntBASIC1.08□□□□□ -2.24
CMTM3Q96MX0 MIR4282-201ENST00000583613 67 ntBASIC1.08□□□□□ -2.24
CMTM3Q96MX0 AL360085.1-201ENST00000604713 532 ntBASIC1.08□□□□□ -2.24
CMTM3Q96MX0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
CMTM3Q96MX0 Y_RNA.122-201ENST00000363331 96 ntBASIC1.07□□□□□ -2.24
CMTM3Q96MX0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.07□□□□□ -2.24
CMTM3Q96MX0 Y_RNA.396-201ENST00000383949 103 ntBASIC1.07□□□□□ -2.24
CMTM3Q96MX0 SNORA51.10-201ENST00000384418 136 ntBASIC1.07□□□□□ -2.24
CMTM3Q96MX0 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
CMTM3Q96MX0 AL392103.1-201ENST00000447000 198 ntBASIC1.07□□□□□ -2.24
CMTM3Q96MX0 AC009474.2-201ENST00000451383 136 ntBASIC1.07□□□□□ -2.24
CMTM3Q96MX0 SCARNA8-201ENST00000515924 131 ntBASIC1.07□□□□□ -2.24
CMTM3Q96MX0 Y_RNA.679-201ENST00000516416 91 ntBASIC1.07□□□□□ -2.24
CMTM3Q96MX0 AC090821.2-201ENST00000523552 176 ntBASIC1.07□□□□□ -2.24
CMTM3Q96MX0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.07□□□□□ -2.24
CMTM3Q96MX0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.07□□□□□ -2.24
CMTM3Q96MX0 SNORD114-24-201ENST00000365029 72 ntBASIC1.06□□□□□ -2.24
CMTM3Q96MX0 Y_RNA.352-201ENST00000365439 102 ntBASIC1.06□□□□□ -2.24
CMTM3Q96MX0 RNU6-482P-201ENST00000391068 107 ntBASIC1.06□□□□□ -2.24
CMTM3Q96MX0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.06□□□□□ -2.24
CMTM3Q96MX0 RNU6-847P-201ENST00000411115 108 ntBASIC1.06□□□□□ -2.24
CMTM3Q96MX0 RNU2-55P-201ENST00000411146 174 ntBASIC1.06□□□□□ -2.24
CMTM3Q96MX0 RPS29P29-201ENST00000456396 171 ntBASIC1.06□□□□□ -2.24
CMTM3Q96MX0 SNORD124-201ENST00000459577 104 ntBASIC1.06□□□□□ -2.24
CMTM3Q96MX0 UBL5P1-201ENST00000507979 193 ntBASIC1.06□□□□□ -2.24
CMTM3Q96MX0 RNU2-13P-201ENST00000515909 113 ntBASIC1.06□□□□□ -2.24
CMTM3Q96MX0 RNU6-327P-201ENST00000516270 127 ntBASIC1.06□□□□□ -2.24
CMTM3Q96MX0 MIR4719-201ENST00000585233 84 ntBASIC1.06□□□□□ -2.24
CMTM3Q96MX0 MIR4791-201ENST00000607666 84 ntBASIC1.06□□□□□ -2.24
CMTM3Q96MX0 RNU6-1309P-201ENST00000363305 108 ntBASIC1.05□□□□□ -2.24
CMTM3Q96MX0 Y_RNA.304-201ENST00000365011 112 ntBASIC1.05□□□□□ -2.24
CMTM3Q96MX0 RNY3P5-201ENST00000384127 102 ntBASIC1.05□□□□□ -2.24
CMTM3Q96MX0 SNORA40.6-201ENST00000391153 128 ntBASIC1.05□□□□□ -2.24
CMTM3Q96MX0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.05□□□□□ -2.24
CMTM3Q96MX0 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
CMTM3Q96MX0 MIR1302-7-201ENST00000408841 72 ntBASIC1.05□□□□□ -2.24
CMTM3Q96MX0 AC107297.1-201ENST00000459991 176 ntBASIC1.05□□□□□ -2.24
CMTM3Q96MX0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.05□□□□□ -2.24
CMTM3Q96MX0 RNU6-365P-201ENST00000517113 106 ntBASIC1.05□□□□□ -2.24
CMTM3Q96MX0 AC007751.1-201ENST00000529260 376 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 223.1 ms