Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.27□□□□□ -2.05
RTF1Q92541 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.27□□□□□ -2.05
RTF1Q92541 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RTF1Q92541 Y_RNA.215-201ENST00000364204 112 ntBASIC2.26□□□□□ -2.05
RTF1Q92541 RNU6-978P-201ENST00000364371 103 ntBASIC2.26□□□□□ -2.05
RTF1Q92541 SNORD72-201ENST00000390994 80 ntBASIC2.26□□□□□ -2.05
RTF1Q92541 RNU2-7P-201ENST00000410794 178 ntBASIC2.26□□□□□ -2.05
RTF1Q92541 RNA5SP100-201ENST00000410903 110 ntBASIC2.26□□□□□ -2.05
RTF1Q92541 RNA5SP59-201ENST00000410922 110 ntBASIC2.26□□□□□ -2.05
RTF1Q92541 RNA5SP489-201ENST00000410986 109 ntBASIC2.26□□□□□ -2.05
RTF1Q92541 AL158823.1-201ENST00000418441 478 ntBASIC2.26□□□□□ -2.05
RTF1Q92541 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.26□□□□□ -2.05
RTF1Q92541 RNU6-789P-201ENST00000517105 102 ntBASIC2.26□□□□□ -2.05
RTF1Q92541 RNA5SP437-201ENST00000517249 129 ntBASIC2.26□□□□□ -2.05
RTF1Q92541 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.26□□□□□ -2.05
RTF1Q92541 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.26□□□□□ -2.05
RTF1Q92541 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.26□□□□□ -2.05
RTF1Q92541 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.26□□□□□ -2.05
RTF1Q92541 Y_RNA.91-201ENST00000363042 107 ntBASIC2.25□□□□□ -2.05
RTF1Q92541 Y_RNA.140-201ENST00000363474 103 ntBASIC2.25□□□□□ -2.05
RTF1Q92541 SNORD50B-201ENST00000364995 70 ntBASIC2.25□□□□□ -2.05
RTF1Q92541 snoU2-30.1-201ENST00000365012 70 ntBASIC2.25□□□□□ -2.05
RTF1Q92541 Y_RNA.488-201ENST00000384403 102 ntBASIC2.25□□□□□ -2.05
RTF1Q92541 RNU6-768P-201ENST00000384683 107 ntBASIC2.25□□□□□ -2.05
RTF1Q92541 MIR676-201ENST00000390702 67 ntBASIC2.25□□□□□ -2.05
RTF1Q92541 RPL30P13-201ENST00000418873 348 ntBASIC2.25□□□□□ -2.05
RTF1Q92541 HSPE1P9-201ENST00000440046 311 ntBASIC2.25□□□□□ -2.05
RTF1Q92541 RN7SL274P-201ENST00000492268 272 ntBASIC2.25□□□□□ -2.05
RTF1Q92541 RNA5SP458-201ENST00000516188 119 ntBASIC2.25□□□□□ -2.05
RTF1Q92541 MIR4287-201ENST00000579398 78 ntBASIC2.25□□□□□ -2.05
RTF1Q92541 MIR3658-201ENST00000636291 56 ntBASIC2.25□□□□□ -2.05
RTF1Q92541 ZNF702P-202ENST00000434269 1966 ntBASIC2.24□□□□□ -2.05
RTF1Q92541 RNU6-1084P-201ENST00000362498 107 ntBASIC2.24□□□□□ -2.05
RTF1Q92541 Y_RNA.66-201ENST00000362862 102 ntBASIC2.24□□□□□ -2.05
RTF1Q92541 Y_RNA.343-201ENST00000365354 112 ntBASIC2.24□□□□□ -2.05
RTF1Q92541 RNU6-1031P-201ENST00000384773 107 ntBASIC2.24□□□□□ -2.05
RTF1Q92541 SNORA75.5-201ENST00000391291 81 ntBASIC2.24□□□□□ -2.05
RTF1Q92541 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.24□□□□□ -2.05
RTF1Q92541 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.24□□□□□ -2.05
RTF1Q92541 RNU6-406P-201ENST00000516470 107 ntBASIC2.24□□□□□ -2.05
RTF1Q92541 RNU6-504P-201ENST00000516568 104 ntBASIC2.24□□□□□ -2.05
RTF1Q92541 MIR548X2-201ENST00000579776 100 ntBASIC2.24□□□□□ -2.05
RTF1Q92541 MIR3618-201ENST00000580330 88 ntBASIC2.24□□□□□ -2.05
RTF1Q92541 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.24□□□□□ -2.05
RTF1Q92541 MIR6844-201ENST00000637122 62 ntBASIC2.24□□□□□ -2.05
RTF1Q92541 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
RTF1Q92541 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.24□□□□□ -2.05
RTF1Q92541 RNU6-199P-201ENST00000362954 107 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 SNORD14E-201ENST00000364009 85 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 RNU6-704P-201ENST00000364162 103 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 RNU4-11P-201ENST00000365287 132 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 Y_RNA.336-201ENST00000365307 109 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 SNORA4.2-201ENST00000365313 147 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 SNORD24-201ENST00000383884 75 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 RNU6-442P-201ENST00000383968 104 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 MIR802-201ENST00000390235 94 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 HMGN2P32-201ENST00000444648 269 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 CYCTP-201ENST00000504253 315 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 SNORD45.4-201ENST00000516629 73 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 MIR4255-201ENST00000579351 72 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 AC120024.3-201ENST00000603167 156 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 AC027279.3-201ENST00000625055 122 ntBASIC2.23□□□□□ -2.05
RTF1Q92541 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.23□□□□□ -2.05
RTF1Q92541 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RTF1Q92541 MIRLET7C-201ENST00000362160 84 ntBASIC2.22□□□□□ -2.05
RTF1Q92541 SNORA25.7-201ENST00000364375 127 ntBASIC2.22□□□□□ -2.05
RTF1Q92541 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RTF1Q92541 SNORD37.2-201ENST00000391075 66 ntBASIC2.22□□□□□ -2.05
RTF1Q92541 TMSB4XP3-201ENST00000445144 114 ntBASIC2.22□□□□□ -2.05
RTF1Q92541 snoU13.27-201ENST00000459278 104 ntBASIC2.22□□□□□ -2.05
RTF1Q92541 MIR3910-1-201ENST00000580936 111 ntBASIC2.22□□□□□ -2.05
RTF1Q92541 AL627230.6-201ENST00000611129 280 ntBASIC2.22□□□□□ -2.05
RTF1Q92541 AC006441.5-201ENST00000612680 209 ntBASIC2.22□□□□□ -2.05
RTF1Q92541 AC008555.8-201ENST00000623602 2168 ntBASIC2.22□□□□□ -2.05
RTF1Q92541 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
RTF1Q92541 RNU6-818P-201ENST00000364837 108 ntBASIC2.21□□□□□ -2.06
RTF1Q92541 MIR569-201ENST00000385228 96 ntBASIC2.21□□□□□ -2.06
RTF1Q92541 MIR513C-201ENST00000401352 84 ntBASIC2.21□□□□□ -2.06
RTF1Q92541 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.21□□□□□ -2.06
RTF1Q92541 HMGN2P19-201ENST00000425149 265 ntBASIC2.21□□□□□ -2.06
RTF1Q92541 AL603825.1-201ENST00000438481 80 ntBASIC2.21□□□□□ -2.06
RTF1Q92541 AC112693.2-201ENST00000556538 232 ntBASIC2.21□□□□□ -2.06
RTF1Q92541 MIR4709-201ENST00000577272 72 ntBASIC2.21□□□□□ -2.06
RTF1Q92541 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.21□□□□□ -2.06
RTF1Q92541 AP000942.3-201ENST00000603702 160 ntBASIC2.21□□□□□ -2.06
RTF1Q92541 AP001485.1-201ENST00000604799 199 ntBASIC2.21□□□□□ -2.06
RTF1Q92541 RNU6-888P-201ENST00000363010 101 ntBASIC2.2□□□□□ -2.06
RTF1Q92541 RNU6-424P-201ENST00000384367 105 ntBASIC2.2□□□□□ -2.06
RTF1Q92541 Y_RNA.568-201ENST00000384742 113 ntBASIC2.2□□□□□ -2.06
RTF1Q92541 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.2□□□□□ -2.06
RTF1Q92541 SNRPGP14-201ENST00000435400 219 ntBASIC2.2□□□□□ -2.06
RTF1Q92541 SNRPGP13-201ENST00000442212 177 ntBASIC2.2□□□□□ -2.06
RTF1Q92541 AL365205.2-201ENST00000594586 68 ntBASIC2.2□□□□□ -2.06
RTF1Q92541 AL096840.1-201ENST00000603287 93 ntBASIC2.2□□□□□ -2.06
RTF1Q92541 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RTF1Q92541 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RTF1Q92541 RNU6-360P-201ENST00000390944 104 ntBASIC2.19□□□□□ -2.06
RTF1Q92541 SNORA17.3-201ENST00000391159 129 ntBASIC2.19□□□□□ -2.06
RTF1Q92541 RNA5SP212-201ENST00000391223 107 ntBASIC2.19□□□□□ -2.06
RTF1Q92541 RNU7-34P-201ENST00000459394 64 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 207.8 ms