Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 Y_RNA.262-201ENST00000364641 102 ntBASIC1.23□□□□□ -2.21
LRIF1Q5T3J3 MIR616-201ENST00000385293 97 ntBASIC1.23□□□□□ -2.21
LRIF1Q5T3J3 MIR1261-201ENST00000408659 82 ntBASIC1.23□□□□□ -2.21
LRIF1Q5T3J3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.23□□□□□ -2.21
LRIF1Q5T3J3 RNU1-123P-201ENST00000458950 160 ntBASIC1.23□□□□□ -2.21
LRIF1Q5T3J3 RN7SKP164-201ENST00000516138 266 ntBASIC1.23□□□□□ -2.21
LRIF1Q5T3J3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
LRIF1Q5T3J3 MIR4764-201ENST00000580680 88 ntBASIC1.23□□□□□ -2.21
LRIF1Q5T3J3 AL096861.1-201ENST00000610899 123 ntBASIC1.23□□□□□ -2.21
LRIF1Q5T3J3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.23□□□□□ -2.21
LRIF1Q5T3J3 AL391903.3-201ENST00000612158 163 ntBASIC1.23□□□□□ -2.21
LRIF1Q5T3J3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
LRIF1Q5T3J3 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
LRIF1Q5T3J3 Y_RNA.292-201ENST00000364904 97 ntBASIC1.22□□□□□ -2.21
LRIF1Q5T3J3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.22□□□□□ -2.21
LRIF1Q5T3J3 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
LRIF1Q5T3J3 SNORA26-201ENST00000391286 122 ntBASIC1.22□□□□□ -2.21
LRIF1Q5T3J3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.22□□□□□ -2.21
LRIF1Q5T3J3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.22□□□□□ -2.21
LRIF1Q5T3J3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.22□□□□□ -2.21
LRIF1Q5T3J3 SNORA31.2-201ENST00000516019 134 ntBASIC1.22□□□□□ -2.21
LRIF1Q5T3J3 AC004817.2-201ENST00000561794 651 ntBASIC1.22□□□□□ -2.21
LRIF1Q5T3J3 MIR3149-201ENST00000584629 83 ntBASIC1.22□□□□□ -2.21
LRIF1Q5T3J3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.22□□□□□ -2.21
LRIF1Q5T3J3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.22□□□□□ -2.21
LRIF1Q5T3J3 Y_RNA.76-201ENST00000362931 109 ntBASIC1.21□□□□□ -2.22
LRIF1Q5T3J3 RNU6-653P-201ENST00000363074 106 ntBASIC1.21□□□□□ -2.22
LRIF1Q5T3J3 Y_RNA.144-201ENST00000363521 113 ntBASIC1.21□□□□□ -2.22
LRIF1Q5T3J3 SNORA1.2-201ENST00000365189 134 ntBASIC1.21□□□□□ -2.22
LRIF1Q5T3J3 RNU6-1228P-201ENST00000391014 107 ntBASIC1.21□□□□□ -2.22
LRIF1Q5T3J3 U8.17-201ENST00000391292 132 ntBASIC1.21□□□□□ -2.22
LRIF1Q5T3J3 AC048334.1-201ENST00000477975 159 ntBASIC1.21□□□□□ -2.22
LRIF1Q5T3J3 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
LRIF1Q5T3J3 RNU1-92P-201ENST00000517017 135 ntBASIC1.21□□□□□ -2.22
LRIF1Q5T3J3 SNORA70.22-201ENST00000517160 124 ntBASIC1.21□□□□□ -2.22
LRIF1Q5T3J3 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
LRIF1Q5T3J3 AC011921.3-201ENST00000605540 361 ntBASIC1.21□□□□□ -2.22
LRIF1Q5T3J3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 ZNF209P-201ENST00000593450 2304 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 RNA5SP48-201ENST00000363969 126 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 RNY4P28-201ENST00000365281 93 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 RNU4-17P-201ENST00000365598 141 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 Y_RNA.486-201ENST00000384398 107 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 Y_RNA.572-201ENST00000384757 98 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 SNORD12-201ENST00000391002 90 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 SNORA11.2-201ENST00000408318 127 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 RNU4-57P-201ENST00000515980 135 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 RNU6-1023P-201ENST00000516137 106 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 RNU6-365P-201ENST00000517113 106 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 MIR3192-201ENST00000584920 77 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 AC015726.2-201ENST00000620112 122 ntBASIC1.2□□□□□ -2.22
LRIF1Q5T3J3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 RNU6-103P-201ENST00000363686 107 ntBASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 snoU2_19.4-201ENST00000364329 80 ntBASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 Y_RNA.370-201ENST00000365589 108 ntBASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 SNORD24-201ENST00000383884 75 ntBASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 Y_RNA.547-201ENST00000384654 119 ntBASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 RNU6-381P-201ENST00000391259 108 ntBASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 MIR548O-201ENST00000408583 114 ntBASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 SNORD116-28-201ENST00000516123 91 ntBASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 RNU6-1299P-201ENST00000516316 100 ntBASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 RNA5SP153-201ENST00000516498 76 ntBASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 AC090821.2-201ENST00000523552 176 ntBASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 MIR548AR-201ENST00000582191 57 ntBASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 AL022345.2-201ENST00000606307 135 ntBASIC1.19□□□□□ -2.22
LRIF1Q5T3J3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
LRIF1Q5T3J3 SNORD27-201ENST00000363981 72 ntBASIC1.18□□□□□ -2.22
LRIF1Q5T3J3 Y_RNA.539-201ENST00000384635 107 ntBASIC1.18□□□□□ -2.22
LRIF1Q5T3J3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
LRIF1Q5T3J3 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
LRIF1Q5T3J3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.18□□□□□ -2.22
LRIF1Q5T3J3 MTND1P19-201ENST00000511780 315 ntBASIC1.18□□□□□ -2.22
LRIF1Q5T3J3 Y_RNA.666-201ENST00000516187 112 ntBASIC1.18□□□□□ -2.22
LRIF1Q5T3J3 RNU4-71P-201ENST00000516258 113 ntBASIC1.18□□□□□ -2.22
LRIF1Q5T3J3 RNU6-504P-201ENST00000516568 104 ntBASIC1.18□□□□□ -2.22
LRIF1Q5T3J3 AC019288.1-201ENST00000557918 224 ntBASIC1.18□□□□□ -2.22
LRIF1Q5T3J3 MIR4303-201ENST00000581299 66 ntBASIC1.18□□□□□ -2.22
LRIF1Q5T3J3 MIR3128-201ENST00000581957 66 ntBASIC1.18□□□□□ -2.22
LRIF1Q5T3J3 AC008133.2-201ENST00000624540 351 ntBASIC1.18□□□□□ -2.22
LRIF1Q5T3J3 Y_RNA.432-201ENST00000384087 111 ntBASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 Y_RNA.447-201ENST00000384184 113 ntBASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 SNORA80D-201ENST00000384488 135 ntBASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 RNU6-910P-201ENST00000390844 107 ntBASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 AL606845.1-201ENST00000404881 255 ntBASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 AC087499.4-201ENST00000448505 178 ntBASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 RNU7-41P-201ENST00000515917 61 ntBASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 SCARNA8-201ENST00000515924 131 ntBASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 Y_RNA.673-201ENST00000516306 88 ntBASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 RNU7-25P-201ENST00000516544 62 ntBASIC1.17□□□□□ -2.22
LRIF1Q5T3J3 AP003716.2-201ENST00000528260 108 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 293.8 ms