Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN5P54829 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN5P54829 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
PTPN5P54829 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PTPN5P54829 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PTPN5P54829 RNA5SP295-201ENST00000362655 121 ntBASIC3.71□□□□□ -1.82
PTPN5P54829 SNORA70.7-201ENST00000384159 133 ntBASIC3.71□□□□□ -1.82
PTPN5P54829 RNU6-913P-201ENST00000390913 95 ntBASIC3.71□□□□□ -1.82
PTPN5P54829 AC079150.2-201ENST00000443733 78 ntBASIC3.71□□□□□ -1.82
PTPN5P54829 RN7SL330P-201ENST00000469709 307 ntBASIC3.71□□□□□ -1.82
PTPN5P54829 RNU1-61P-201ENST00000516107 151 ntBASIC3.71□□□□□ -1.82
PTPN5P54829 RNU6-1116P-201ENST00000517269 99 ntBASIC3.71□□□□□ -1.82
PTPN5P54829 MIR4791-201ENST00000607666 84 ntBASIC3.71□□□□□ -1.82
PTPN5P54829 AC244205.2-202ENST00000635781 342 ntBASIC3.71□□□□□ -1.82
PTPN5P54829 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PTPN5P54829 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PTPN5P54829 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTPN5P54829 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTPN5P54829 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTPN5P54829 HSBP1P2-201ENST00000299671 229 ntBASIC3.7□□□□□ -1.82
PTPN5P54829 SNORD114-10-201ENST00000363409 72 ntBASIC3.7□□□□□ -1.82
PTPN5P54829 RNA5SP322-201ENST00000363617 119 ntBASIC3.7□□□□□ -1.82
PTPN5P54829 Y_RNA.264-201ENST00000364665 102 ntBASIC3.7□□□□□ -1.82
PTPN5P54829 SNORD77.2-201ENST00000391045 68 ntBASIC3.7□□□□□ -1.82
PTPN5P54829 RNA5SP323-201ENST00000391094 133 ntBASIC3.7□□□□□ -1.82
PTPN5P54829 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.7□□□□□ -1.82
PTPN5P54829 HMGN2P16-201ENST00000456802 261 ntBASIC3.7□□□□□ -1.82
PTPN5P54829 RNU7-73P-201ENST00000458743 63 ntBASIC3.7□□□□□ -1.82
PTPN5P54829 RNA5SP208-201ENST00000516156 78 ntBASIC3.7□□□□□ -1.82
PTPN5P54829 RNU7-137P-201ENST00000516788 62 ntBASIC3.7□□□□□ -1.82
PTPN5P54829 MIR5004-201ENST00000579078 107 ntBASIC3.7□□□□□ -1.82
PTPN5P54829 AC027279.3-201ENST00000625055 122 ntBASIC3.7□□□□□ -1.82
PTPN5P54829 AP000553.6-201ENST00000641242 118 ntBASIC3.7□□□□□ -1.82
PTPN5P54829 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTPN5P54829 AC007336.1-201ENST00000576365 3828 ntBASIC3.7□□□□□ -1.82
PTPN5P54829 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTPN5P54829 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTPN5P54829 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.69□□□□□ -1.82
PTPN5P54829 Y_RNA.98-201ENST00000363109 102 ntBASIC3.69□□□□□ -1.82
PTPN5P54829 MIR515-2-201ENST00000384883 83 ntBASIC3.69□□□□□ -1.82
PTPN5P54829 MIR515-1-201ENST00000384884 83 ntBASIC3.69□□□□□ -1.82
PTPN5P54829 RNU2-48P-201ENST00000410694 191 ntBASIC3.69□□□□□ -1.82
PTPN5P54829 SRIP3-201ENST00000413200 219 ntBASIC3.69□□□□□ -1.82
PTPN5P54829 RPS29P29-201ENST00000456396 171 ntBASIC3.69□□□□□ -1.82
PTPN5P54829 RNU7-48P-201ENST00000458875 63 ntBASIC3.69□□□□□ -1.82
PTPN5P54829 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PTPN5P54829 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTPN5P54829 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
PTPN5P54829 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPN5P54829 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
PTPN5P54829 SNORA1.2-201ENST00000365189 134 ntBASIC3.68□□□□□ -1.82
PTPN5P54829 MIR154-201ENST00000385243 84 ntBASIC3.68□□□□□ -1.82
PTPN5P54829 RNA5SP292-201ENST00000390974 118 ntBASIC3.68□□□□□ -1.82
PTPN5P54829 TRBV12-1-201ENST00000479785 344 ntBASIC3.68□□□□□ -1.82
PTPN5P54829 RN7SL297P-201ENST00000483161 293 ntBASIC3.68□□□□□ -1.82
PTPN5P54829 MIR8066-201ENST00000617280 78 ntBASIC3.68□□□□□ -1.82
PTPN5P54829 XIST_intron.1-201ENST00000619444 68 ntBASIC3.68□□□□□ -1.82
PTPN5P54829 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.67□□□□□ -1.82
PTPN5P54829 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN5P54829 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN5P54829 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN5P54829 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN5P54829 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN5P54829 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN5P54829 RNU4-35P-201ENST00000362588 141 ntBASIC3.67□□□□□ -1.82
PTPN5P54829 Y_RNA.370-201ENST00000365589 108 ntBASIC3.67□□□□□ -1.82
PTPN5P54829 RNU6-163P-201ENST00000384396 106 ntBASIC3.67□□□□□ -1.82
PTPN5P54829 AL606517.2-201ENST00000442855 241 ntBASIC3.67□□□□□ -1.82
PTPN5P54829 RNU7-67P-201ENST00000459003 62 ntBASIC3.67□□□□□ -1.82
PTPN5P54829 RNU7-79P-201ENST00000516082 62 ntBASIC3.67□□□□□ -1.82
PTPN5P54829 Y_RNA.676-201ENST00000516393 96 ntBASIC3.67□□□□□ -1.82
PTPN5P54829 RNU6-579P-201ENST00000516879 102 ntBASIC3.67□□□□□ -1.82
PTPN5P54829 AC105081.1-201ENST00000617727 106 ntBASIC3.67□□□□□ -1.82
PTPN5P54829 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PTPN5P54829 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN5P54829 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN5P54829 RNU1-18P-201ENST00000363062 164 ntBASIC3.66□□□□□ -1.82
PTPN5P54829 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.66□□□□□ -1.82
PTPN5P54829 AC006989.1-201ENST00000427212 131 ntBASIC3.66□□□□□ -1.82
PTPN5P54829 AC245047.7-201ENST00000440265 293 ntBASIC3.66□□□□□ -1.82
PTPN5P54829 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.66□□□□□ -1.82
PTPN5P54829 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PTPN5P54829 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PTPN5P54829 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
PTPN5P54829 RNU6-669P-201ENST00000365575 107 ntBASIC3.65□□□□□ -1.83
PTPN5P54829 RNU6-602P-201ENST00000411155 105 ntBASIC3.65□□□□□ -1.83
PTPN5P54829 Y_RNA.648-201ENST00000459455 110 ntBASIC3.65□□□□□ -1.83
PTPN5P54829 AC006483.1-201ENST00000487308 313 ntBASIC3.65□□□□□ -1.83
PTPN5P54829 SNORA31.21-201ENST00000517180 77 ntBASIC3.65□□□□□ -1.83
PTPN5P54829 AP001362.1-201ENST00000625165 124 ntBASIC3.65□□□□□ -1.83
PTPN5P54829 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTPN5P54829 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTPN5P54829 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTPN5P54829 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN5P54829 RNU6-630P-201ENST00000391258 106 ntBASIC3.64□□□□□ -1.83
PTPN5P54829 AL357552.1-201ENST00000445254 415 ntBASIC3.64□□□□□ -1.83
PTPN5P54829 SNORA18.5-201ENST00000516616 101 ntBASIC3.64□□□□□ -1.83
PTPN5P54829 AC067747.1-201ENST00000608026 250 ntBASIC3.64□□□□□ -1.83
PTPN5P54829 AC002076.2-201ENST00000617362 122 ntBASIC3.64□□□□□ -1.83
PTPN5P54829 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms