Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 JPX_2.1-201ENST00000614161 69 ntBASIC1.96□□□□□ -2.1
MMP13P45452 RN7SL853P-201ENST00000617250 223 ntBASIC1.96□□□□□ -2.1
MMP13P45452 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.96□□□□□ -2.1
MMP13P45452 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MMP13P45452 SNORD114-1-201ENST00000362705 72 ntBASIC1.95□□□□□ -2.1
MMP13P45452 SNORD115-3-201ENST00000363100 82 ntBASIC1.95□□□□□ -2.1
MMP13P45452 RNU6-1325P-201ENST00000364905 105 ntBASIC1.95□□□□□ -2.1
MMP13P45452 RNU6-160P-201ENST00000384591 107 ntBASIC1.95□□□□□ -2.1
MMP13P45452 MIR522-201ENST00000385071 87 ntBASIC1.95□□□□□ -2.1
MMP13P45452 AC019129.1-201ENST00000403786 261 ntBASIC1.95□□□□□ -2.1
MMP13P45452 BX510359.4-201ENST00000423750 193 ntBASIC1.95□□□□□ -2.1
MMP13P45452 MIR514B-201ENST00000516774 80 ntBASIC1.95□□□□□ -2.1
MMP13P45452 Y_RNA.712-201ENST00000517011 92 ntBASIC1.95□□□□□ -2.1
MMP13P45452 RNU6-1270P-201ENST00000517128 108 ntBASIC1.95□□□□□ -2.1
MMP13P45452 MIR3129-201ENST00000581095 76 ntBASIC1.95□□□□□ -2.1
MMP13P45452 AL365205.2-201ENST00000594586 68 ntBASIC1.95□□□□□ -2.1
MMP13P45452 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.95□□□□□ -2.1
MMP13P45452 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.95□□□□□ -2.1
MMP13P45452 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
MMP13P45452 MIR126-201ENST00000362291 85 ntBASIC1.94□□□□□ -2.1
MMP13P45452 Y_RNA.114-201ENST00000363265 113 ntBASIC1.94□□□□□ -2.1
MMP13P45452 Y_RNA.120-201ENST00000363304 110 ntBASIC1.94□□□□□ -2.1
MMP13P45452 RNA5SP109-201ENST00000391010 116 ntBASIC1.94□□□□□ -2.1
MMP13P45452 RNA5SP465-201ENST00000391195 109 ntBASIC1.94□□□□□ -2.1
MMP13P45452 MIR891A-201ENST00000401237 79 ntBASIC1.94□□□□□ -2.1
MMP13P45452 RN7SKP284-201ENST00000411002 343 ntBASIC1.94□□□□□ -2.1
MMP13P45452 AL035461.1-201ENST00000421490 332 ntBASIC1.94□□□□□ -2.1
MMP13P45452 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.94□□□□□ -2.1
MMP13P45452 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.94□□□□□ -2.1
MMP13P45452 RNA5SP236-201ENST00000516169 116 ntBASIC1.94□□□□□ -2.1
MMP13P45452 RNU6-781P-201ENST00000516377 101 ntBASIC1.94□□□□□ -2.1
MMP13P45452 RNU1-142P-201ENST00000516682 145 ntBASIC1.94□□□□□ -2.1
MMP13P45452 AC108081.1-201ENST00000604358 221 ntBASIC1.94□□□□□ -2.1
MMP13P45452 MIR518F-201ENST00000384973 87 ntBASIC1.93□□□□□ -2.1
MMP13P45452 MIR624-201ENST00000385217 97 ntBASIC1.93□□□□□ -2.1
MMP13P45452 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.93□□□□□ -2.1
MMP13P45452 SNRPGP14-201ENST00000435400 219 ntBASIC1.93□□□□□ -2.1
MMP13P45452 AL158147.1-201ENST00000443970 75 ntBASIC1.93□□□□□ -2.1
MMP13P45452 MIR6129-201ENST00000616087 109 ntBASIC1.93□□□□□ -2.1
MMP13P45452 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.93□□□□□ -2.1
MMP13P45452 MIR3914-2-201ENST00000637339 95 ntBASIC1.93□□□□□ -2.1
MMP13P45452 AL359851.1-201ENST00000569460 4997 ntBASIC1.93□□□□□ -2.1
MMP13P45452 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
MMP13P45452 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
MMP13P45452 SNORD77.3-201ENST00000391113 65 ntBASIC1.92□□□□□ -2.1
MMP13P45452 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.92□□□□□ -2.1
MMP13P45452 AL445685.2-201ENST00000422551 342 ntBASIC1.92□□□□□ -2.1
MMP13P45452 UBL5P3-201ENST00000475112 231 ntBASIC1.92□□□□□ -2.1
MMP13P45452 Y_RNA.690-201ENST00000516603 95 ntBASIC1.92□□□□□ -2.1
MMP13P45452 RNU6-365P-201ENST00000517113 106 ntBASIC1.92□□□□□ -2.1
MMP13P45452 AL627230.6-201ENST00000611129 280 ntBASIC1.92□□□□□ -2.1
MMP13P45452 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MMP13P45452 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
MMP13P45452 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
MMP13P45452 RNU6-888P-201ENST00000363010 101 ntBASIC1.91□□□□□ -2.1
MMP13P45452 RNU6-23P-201ENST00000363283 107 ntBASIC1.91□□□□□ -2.1
MMP13P45452 SNORD48-201ENST00000364953 64 ntBASIC1.91□□□□□ -2.1
MMP13P45452 MIR597-201ENST00000384968 97 ntBASIC1.91□□□□□ -2.1
MMP13P45452 RNA5SP323-201ENST00000391094 133 ntBASIC1.91□□□□□ -2.1
MMP13P45452 AL603914.1-201ENST00000401964 204 ntBASIC1.91□□□□□ -2.1
MMP13P45452 MIR1283-2-201ENST00000408621 87 ntBASIC1.91□□□□□ -2.1
MMP13P45452 Y_RNA.617-201ENST00000410920 90 ntBASIC1.91□□□□□ -2.1
MMP13P45452 RNA5SP127-201ENST00000411051 133 ntBASIC1.91□□□□□ -2.1
MMP13P45452 CST2P1-201ENST00000425770 87 ntBASIC1.91□□□□□ -2.1
MMP13P45452 FTH1P12-201ENST00000432137 551 ntBASIC1.91□□□□□ -2.1
MMP13P45452 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.91□□□□□ -2.1
MMP13P45452 AF228730.3-201ENST00000436691 102 ntBASIC1.91□□□□□ -2.1
MMP13P45452 AC023449.1-201ENST00000454464 154 ntBASIC1.91□□□□□ -2.1
MMP13P45452 AL049830.1-201ENST00000468034 425 ntBASIC1.91□□□□□ -2.1
MMP13P45452 SNORD33.1-201ENST00000516213 88 ntBASIC1.91□□□□□ -2.1
MMP13P45452 SNORA31.10-201ENST00000516482 106 ntBASIC1.91□□□□□ -2.1
MMP13P45452 SCARNA15-202ENST00000516881 127 ntBASIC1.91□□□□□ -2.1
MMP13P45452 AC090049.2-201ENST00000550377 109 ntBASIC1.91□□□□□ -2.1
MMP13P45452 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
MMP13P45452 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
MMP13P45452 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.91□□□□□ -2.1
MMP13P45452 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
MMP13P45452 AC131280.1-202ENST00000624067 4211 ntBASIC1.9□□□□□ -2.1
MMP13P45452 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
MMP13P45452 SNORA63.4-201ENST00000362763 126 ntBASIC1.9□□□□□ -2.11
MMP13P45452 RNY4P18-201ENST00000391107 89 ntBASIC1.9□□□□□ -2.11
MMP13P45452 RNU6-693P-201ENST00000516134 107 ntBASIC1.9□□□□□ -2.11
MMP13P45452 Y_RNA.692-201ENST00000516627 105 ntBASIC1.9□□□□□ -2.11
MMP13P45452 RNU6-919P-201ENST00000516731 104 ntBASIC1.9□□□□□ -2.11
MMP13P45452 RNU6-1116P-201ENST00000517269 99 ntBASIC1.9□□□□□ -2.11
MMP13P45452 AC024995.1-201ENST00000523014 93 ntBASIC1.9□□□□□ -2.11
MMP13P45452 AL358944.1-201ENST00000528537 144 ntBASIC1.9□□□□□ -2.11
MMP13P45452 MIR4662B-201ENST00000579498 81 ntBASIC1.9□□□□□ -2.11
MMP13P45452 MIR4762-201ENST00000585261 75 ntBASIC1.9□□□□□ -2.11
MMP13P45452 AC245060.5-201ENST00000610778 3293 ntBASIC1.9□□□□□ -2.11
MMP13P45452 RNA5SP276-201ENST00000362580 94 ntBASIC1.89□□□□□ -2.11
MMP13P45452 SNORD68-201ENST00000363214 84 ntBASIC1.89□□□□□ -2.11
MMP13P45452 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
MMP13P45452 SNORD58C-201ENST00000365223 64 ntBASIC1.89□□□□□ -2.11
MMP13P45452 SNORA18.4-201ENST00000516440 124 ntBASIC1.89□□□□□ -2.11
MMP13P45452 RNU6-504P-201ENST00000516568 104 ntBASIC1.89□□□□□ -2.11
MMP13P45452 AP002004.2-201ENST00000531656 154 ntBASIC1.89□□□□□ -2.11
MMP13P45452 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
MMP13P45452 AC024614.2-201ENST00000577584 372 ntBASIC1.89□□□□□ -2.11
MMP13P45452 MIR4299-201ENST00000577899 72 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms