Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 RNU4-62P-201ENST00000410125 130 ntBASIC2.03□□□□□ -2.08
TOP3BO95985 OR9P1P-201ENST00000496431 281 ntBASIC2.03□□□□□ -2.08
TOP3BO95985 RNU7-149P-201ENST00000516739 59 ntBASIC2.03□□□□□ -2.08
TOP3BO95985 SNORA31.25-201ENST00000517242 134 ntBASIC2.03□□□□□ -2.08
TOP3BO95985 MIR3169-201ENST00000578032 83 ntBASIC2.03□□□□□ -2.08
TOP3BO95985 MIR4529-201ENST00000578110 78 ntBASIC2.03□□□□□ -2.08
TOP3BO95985 AC091178.2-201ENST00000584401 117 ntBASIC2.03□□□□□ -2.08
TOP3BO95985 Pinc.1-201ENST00000616452 154 ntBASIC2.03□□□□□ -2.08
TOP3BO95985 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.03□□□□□ -2.08
TOP3BO95985 RNU6-661P-201ENST00000362409 107 ntBASIC2.02□□□□□ -2.09
TOP3BO95985 Y_RNA.224-201ENST00000364308 111 ntBASIC2.02□□□□□ -2.09
TOP3BO95985 Y_RNA.294-201ENST00000364916 102 ntBASIC2.02□□□□□ -2.09
TOP3BO95985 Y_RNA.525-201ENST00000384570 113 ntBASIC2.02□□□□□ -2.09
TOP3BO95985 MIR518A2-201ENST00000384966 87 ntBASIC2.02□□□□□ -2.09
TOP3BO95985 RNU11-3P-201ENST00000391111 133 ntBASIC2.02□□□□□ -2.09
TOP3BO95985 RNA5SP467-201ENST00000391274 118 ntBASIC2.02□□□□□ -2.09
TOP3BO95985 HMGN2P39-201ENST00000398005 273 ntBASIC2.02□□□□□ -2.09
TOP3BO95985 Y_RNA.621-201ENST00000411065 96 ntBASIC2.02□□□□□ -2.09
TOP3BO95985 RN7SKP179-201ENST00000516126 217 ntBASIC2.02□□□□□ -2.09
TOP3BO95985 MIR4662B-201ENST00000579498 81 ntBASIC2.02□□□□□ -2.09
TOP3BO95985 AL353149.1-201ENST00000610667 244 ntBASIC2.02□□□□□ -2.09
TOP3BO95985 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.02□□□□□ -2.09
TOP3BO95985 MIR338-201ENST00000636369 67 ntBASIC2.02□□□□□ -2.09
TOP3BO95985 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
TOP3BO95985 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TOP3BO95985 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TOP3BO95985 RNU6-834P-201ENST00000362367 110 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 Y_RNA.120-201ENST00000363304 110 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 Y_RNA.486-201ENST00000384398 107 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 Y_RNA.563-201ENST00000384707 108 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 SNORA26-201ENST00000391286 122 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 AL035461.1-201ENST00000421490 332 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 AC233266.1-201ENST00000454518 96 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 NDUFA4P2-201ENST00000489989 244 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 RNU6-1291P-201ENST00000516591 104 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 RNU6-126P-201ENST00000516685 103 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 RNU6-919P-201ENST00000516731 104 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 RNU1-40P-201ENST00000516816 164 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 RNU1-97P-201ENST00000516872 164 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.01□□□□□ -2.09
TOP3BO95985 AC090049.2-201ENST00000550377 109 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 Y_RNA.757-201ENST00000578934 114 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 AC131055.1-201ENST00000584626 316 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 AC242852.1-201ENST00000612151 96 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 AL359075.3-201ENST00000613288 217 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 AC244015.1-201ENST00000622301 99 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 U6.108-201ENST00000637764 58 ntBASIC2.01□□□□□ -2.09
TOP3BO95985 RNU6-235P-201ENST00000362644 107 ntBASIC2□□□□□ -2.09
TOP3BO95985 SNORA33-201ENST00000363664 130 ntBASIC2□□□□□ -2.09
TOP3BO95985 Y_RNA.253-201ENST00000364562 112 ntBASIC2□□□□□ -2.09
TOP3BO95985 RNU6-1325P-201ENST00000364905 105 ntBASIC2□□□□□ -2.09
TOP3BO95985 RNA5SP190-201ENST00000365222 118 ntBASIC2□□□□□ -2.09
TOP3BO95985 RNU6-44P-201ENST00000384045 107 ntBASIC2□□□□□ -2.09
TOP3BO95985 MIR17-201ENST00000385012 84 ntBASIC2□□□□□ -2.09
TOP3BO95985 RNU11-5P-201ENST00000391216 129 ntBASIC2□□□□□ -2.09
TOP3BO95985 AP1B1P2-201ENST00000416196 106 ntBASIC2□□□□□ -2.09
TOP3BO95985 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2□□□□□ -2.09
TOP3BO95985 HMGN1P7-201ENST00000491722 313 ntBASIC2□□□□□ -2.09
TOP3BO95985 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
TOP3BO95985 MIR5089-201ENST00000580047 84 ntBASIC2□□□□□ -2.09
TOP3BO95985 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2□□□□□ -2.09
TOP3BO95985 MIR6079-201ENST00000635807 62 ntBASIC2□□□□□ -2.09
TOP3BO95985 AC018630.2-201ENST00000534866 2403 ntBASIC2□□□□□ -2.09
TOP3BO95985 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TOP3BO95985 RNU6-862P-201ENST00000362804 105 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 Y_RNA.66-201ENST00000362862 102 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 Y_RNA.280-201ENST00000364765 112 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 Y_RNA.540-201ENST00000384638 111 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 MIR597-201ENST00000384968 97 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TOP3BO95985 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TOP3BO95985 AL117342.1-201ENST00000404861 406 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 MIR1283-2-201ENST00000408621 87 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 AL158823.1-201ENST00000418441 478 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.99□□□□□ -2.09
TOP3BO95985 SNRPGP10-201ENST00000432323 225 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 MRPS17P9-201ENST00000511924 393 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 Y_RNA.692-201ENST00000516627 105 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 RNU6-341P-201ENST00000516973 96 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 Y_RNA.712-201ENST00000517011 92 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 RNU2-60P-201ENST00000517290 128 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 AC007751.1-201ENST00000529260 376 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 MIR3935-201ENST00000583472 104 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 AC005786.1-201ENST00000588553 154 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.99□□□□□ -2.09
TOP3BO95985 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.99□□□□□ -2.09
TOP3BO95985 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.99□□□□□ -2.09
TOP3BO95985 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
TOP3BO95985 Y_RNA.267-201ENST00000364679 109 ntBASIC1.98□□□□□ -2.09
TOP3BO95985 RNU6-1056P-201ENST00000383996 107 ntBASIC1.98□□□□□ -2.09
TOP3BO95985 SNORA12.1-201ENST00000390873 148 ntBASIC1.98□□□□□ -2.09
TOP3BO95985 RNA5SP465-201ENST00000391195 109 ntBASIC1.98□□□□□ -2.09
TOP3BO95985 AC019129.1-201ENST00000403786 261 ntBASIC1.98□□□□□ -2.09
TOP3BO95985 MLLT10P1-201ENST00000418346 262 ntBASIC1.98□□□□□ -2.09
TOP3BO95985 CST2P1-201ENST00000425770 87 ntBASIC1.98□□□□□ -2.09
TOP3BO95985 AC003989.2-201ENST00000440224 169 ntBASIC1.98□□□□□ -2.09
TOP3BO95985 RNU6-772P-201ENST00000516042 105 ntBASIC1.98□□□□□ -2.09
TOP3BO95985 RNU1-142P-201ENST00000516682 145 ntBASIC1.98□□□□□ -2.09
TOP3BO95985 RNU6-365P-201ENST00000517113 106 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 216.2 ms