Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 Y_RNA.122-201ENST00000363331 96 ntBASIC1.21□□□□□ -2.22
TO15178 RNU6-268P-201ENST00000364174 107 ntBASIC1.21□□□□□ -2.22
TO15178 RNU4-10P-201ENST00000364383 140 ntBASIC1.21□□□□□ -2.22
TO15178 MIR626-201ENST00000385032 94 ntBASIC1.21□□□□□ -2.22
TO15178 AL603910.2-201ENST00000407268 136 ntBASIC1.21□□□□□ -2.22
TO15178 RNU2-38P-201ENST00000410856 79 ntBASIC1.21□□□□□ -2.22
TO15178 RNA5SP247-201ENST00000411181 105 ntBASIC1.21□□□□□ -2.22
TO15178 SNRPGP14-201ENST00000435400 219 ntBASIC1.21□□□□□ -2.22
TO15178 RNU6-1132P-201ENST00000459214 107 ntBASIC1.21□□□□□ -2.22
TO15178 SNORD111.1-201ENST00000516421 86 ntBASIC1.21□□□□□ -2.22
TO15178 RNU7-149P-201ENST00000516739 59 ntBASIC1.21□□□□□ -2.22
TO15178 SNORA18.7-201ENST00000516910 131 ntBASIC1.21□□□□□ -2.22
TO15178 MIR4662B-201ENST00000579498 81 ntBASIC1.21□□□□□ -2.22
TO15178 MIR4282-201ENST00000583613 67 ntBASIC1.21□□□□□ -2.22
TO15178 AC006441.5-201ENST00000612680 209 ntBASIC1.21□□□□□ -2.22
TO15178 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
TO15178 SNORA7.1-201ENST00000363750 139 ntBASIC1.2□□□□□ -2.22
TO15178 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
TO15178 RNU6-651P-201ENST00000411040 105 ntBASIC1.2□□□□□ -2.22
TO15178 RNU6-1054P-201ENST00000411293 104 ntBASIC1.2□□□□□ -2.22
TO15178 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.2□□□□□ -2.22
TO15178 COX6CP14-201ENST00000469580 174 ntBASIC1.2□□□□□ -2.22
TO15178 AC004223.1-201ENST00000479840 271 ntBASIC1.2□□□□□ -2.22
TO15178 AC108729.3-201ENST00000513484 108 ntBASIC1.2□□□□□ -2.22
TO15178 RNU6-830P-201ENST00000516353 107 ntBASIC1.2□□□□□ -2.22
TO15178 RNU7-43P-201ENST00000516554 64 ntBASIC1.2□□□□□ -2.22
TO15178 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.2□□□□□ -2.22
TO15178 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.2□□□□□ -2.22
TO15178 BX284668.6-201ENST00000606899 438 ntBASIC1.2□□□□□ -2.22
TO15178 Pinc.1-201ENST00000616452 154 ntBASIC1.2□□□□□ -2.22
TO15178 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.2□□□□□ -2.22
TO15178 U4.1-201ENST00000620349 87 ntBASIC1.2□□□□□ -2.22
TO15178 Y_RNA.238-201ENST00000364441 102 ntBASIC1.19□□□□□ -2.22
TO15178 Y_RNA.277-201ENST00000364754 102 ntBASIC1.19□□□□□ -2.22
TO15178 RNU6-1138P-201ENST00000365359 106 ntBASIC1.19□□□□□ -2.22
TO15178 Y_RNA.562-201ENST00000384695 113 ntBASIC1.19□□□□□ -2.22
TO15178 MIR520C-201ENST00000385005 87 ntBASIC1.19□□□□□ -2.22
TO15178 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
TO15178 SNORD123-201ENST00000459473 70 ntBASIC1.19□□□□□ -2.22
TO15178 RNU6-126P-201ENST00000516685 103 ntBASIC1.19□□□□□ -2.22
TO15178 AC100767.1-201ENST00000528178 123 ntBASIC1.19□□□□□ -2.22
TO15178 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.19□□□□□ -2.22
TO15178 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
TO15178 MIR4498-201ENST00000577599 66 ntBASIC1.19□□□□□ -2.22
TO15178 snoU13.31-201ENST00000607291 104 ntBASIC1.19□□□□□ -2.22
TO15178 Y_RNA.304-201ENST00000365011 112 ntBASIC1.18□□□□□ -2.22
TO15178 RNU6-196P-201ENST00000384315 107 ntBASIC1.18□□□□□ -2.22
TO15178 Y_RNA.587-201ENST00000391210 103 ntBASIC1.18□□□□□ -2.22
TO15178 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.18□□□□□ -2.22
TO15178 AC245047.8-201ENST00000456455 284 ntBASIC1.18□□□□□ -2.22
TO15178 AL133373.1-201ENST00000497098 94 ntBASIC1.18□□□□□ -2.22
TO15178 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.18□□□□□ -2.22
TO15178 SNORA31.2-201ENST00000516019 134 ntBASIC1.18□□□□□ -2.22
TO15178 SNORA31.4-201ENST00000516049 129 ntBASIC1.18□□□□□ -2.22
TO15178 RN7SKP179-201ENST00000516126 217 ntBASIC1.18□□□□□ -2.22
TO15178 SNORD77.4-201ENST00000516158 81 ntBASIC1.18□□□□□ -2.22
TO15178 Y_RNA.668-201ENST00000516233 93 ntBASIC1.18□□□□□ -2.22
TO15178 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TO15178 Y_RNA.229-201ENST00000364347 113 ntBASIC1.17□□□□□ -2.22
TO15178 Y_RNA.416-201ENST00000384014 113 ntBASIC1.17□□□□□ -2.22
TO15178 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.17□□□□□ -2.22
TO15178 AC245047.7-201ENST00000440265 293 ntBASIC1.17□□□□□ -2.22
TO15178 RN7SKP164-201ENST00000516138 266 ntBASIC1.17□□□□□ -2.22
TO15178 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.17□□□□□ -2.22
TO15178 MIR4764-201ENST00000580680 88 ntBASIC1.17□□□□□ -2.22
TO15178 AC062037.2-201ENST00000610137 73 ntBASIC1.17□□□□□ -2.22
TO15178 AL096861.1-201ENST00000610899 123 ntBASIC1.17□□□□□ -2.22
TO15178 AL442067.1-201ENST00000613261 223 ntBASIC1.17□□□□□ -2.22
TO15178 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
TO15178 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.17□□□□□ -2.22
TO15178 AL365265.1-201ENST00000621045 234 ntBASIC1.17□□□□□ -2.22
TO15178 SNORA70.7-201ENST00000384159 133 ntBASIC1.16□□□□□ -2.22
TO15178 RNU6-1067P-201ENST00000384752 107 ntBASIC1.16□□□□□ -2.22
TO15178 Y_RNA.572-201ENST00000384757 98 ntBASIC1.16□□□□□ -2.22
TO15178 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.16□□□□□ -2.22
TO15178 AC048334.1-201ENST00000477975 159 ntBASIC1.16□□□□□ -2.22
TO15178 SNORA70.22-201ENST00000517160 124 ntBASIC1.16□□□□□ -2.22
TO15178 MIR4643-201ENST00000577473 78 ntBASIC1.16□□□□□ -2.22
TO15178 AC015726.2-201ENST00000620112 122 ntBASIC1.16□□□□□ -2.22
TO15178 Y_RNA.262-201ENST00000364641 102 ntBASIC1.15□□□□□ -2.23
TO15178 RNU6-702P-201ENST00000364982 107 ntBASIC1.15□□□□□ -2.23
TO15178 Y_RNA.350-201ENST00000365409 98 ntBASIC1.15□□□□□ -2.23
TO15178 RNY3P5-201ENST00000384127 102 ntBASIC1.15□□□□□ -2.23
TO15178 Y_RNA.478-201ENST00000384358 107 ntBASIC1.15□□□□□ -2.23
TO15178 U8.17-201ENST00000391292 132 ntBASIC1.15□□□□□ -2.23
TO15178 RNU2-55P-201ENST00000411146 174 ntBASIC1.15□□□□□ -2.23
TO15178 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.15□□□□□ -2.23
TO15178 MIR4503-201ENST00000582187 83 ntBASIC1.15□□□□□ -2.23
TO15178 MIR3192-201ENST00000584920 77 ntBASIC1.15□□□□□ -2.23
TO15178 AL162730.1-201ENST00000605734 292 ntBASIC1.15□□□□□ -2.23
TO15178 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.15□□□□□ -2.23
TO15178 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.15□□□□□ -2.23
TO15178 Y_RNA.193-201ENST00000363979 102 ntBASIC1.14□□□□□ -2.23
TO15178 Y_RNA.292-201ENST00000364904 97 ntBASIC1.14□□□□□ -2.23
TO15178 SNORA1.2-201ENST00000365189 134 ntBASIC1.14□□□□□ -2.23
TO15178 Y_RNA.452-201ENST00000384202 108 ntBASIC1.14□□□□□ -2.23
TO15178 SNORA25-201ENST00000384384 134 ntBASIC1.14□□□□□ -2.23
TO15178 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.14□□□□□ -2.23
TO15178 MIR548AR-201ENST00000582191 57 ntBASIC1.14□□□□□ -2.23
TO15178 AL022345.2-201ENST00000606307 135 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 251.5 ms