Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MIR136-201ENST00000385207 82 ntBASIC1.17□□□□□ -2.22
O00370 MIR653-201ENST00000385279 96 ntBASIC1.17□□□□□ -2.22
O00370 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.17□□□□□ -2.22
O00370 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.17□□□□□ -2.22
O00370 AL118496.2-201ENST00000448300 230 ntBASIC1.17□□□□□ -2.22
O00370 Y_RNA.641-201ENST00000459414 105 ntBASIC1.17□□□□□ -2.22
O00370 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.17□□□□□ -2.22
O00370 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.17□□□□□ -2.22
O00370 AL353621.2-201ENST00000605340 133 ntBASIC1.17□□□□□ -2.22
O00370 U2.14-201ENST00000615943 113 ntBASIC1.17□□□□□ -2.22
O00370 AC015726.2-201ENST00000620112 122 ntBASIC1.17□□□□□ -2.22
O00370 AC099654.10-201ENST00000640395 161 ntBASIC1.17□□□□□ -2.22
O00370 MIR96-201ENST00000362288 78 ntBASIC1.16□□□□□ -2.22
O00370 RNU6-674P-201ENST00000363831 107 ntBASIC1.16□□□□□ -2.22
O00370 Y_RNA.191-201ENST00000363972 113 ntBASIC1.16□□□□□ -2.22
O00370 SNORD38C-201ENST00000384381 69 ntBASIC1.16□□□□□ -2.22
O00370 Y_RNA.590-201ENST00000410140 107 ntBASIC1.16□□□□□ -2.22
O00370 RNU2-38P-201ENST00000410856 79 ntBASIC1.16□□□□□ -2.22
O00370 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
O00370 SNORA31.2-201ENST00000516019 134 ntBASIC1.16□□□□□ -2.22
O00370 MIR4452-201ENST00000583004 71 ntBASIC1.16□□□□□ -2.22
O00370 AL357312.1-201ENST00000603879 298 ntBASIC1.16□□□□□ -2.22
O00370 SNORD114-22-201ENST00000365423 72 ntBASIC1.15□□□□□ -2.23
O00370 RNU6-969P-201ENST00000383900 105 ntBASIC1.15□□□□□ -2.23
O00370 RNU6-144P-201ENST00000383951 107 ntBASIC1.15□□□□□ -2.23
O00370 MIR489-201ENST00000384923 84 ntBASIC1.15□□□□□ -2.23
O00370 RNU6-651P-201ENST00000411040 105 ntBASIC1.15□□□□□ -2.23
O00370 MRPL35P3-201ENST00000421557 364 ntBASIC1.15□□□□□ -2.23
O00370 SNORD11-201ENST00000459124 84 ntBASIC1.15□□□□□ -2.23
O00370 AC048334.1-201ENST00000477975 159 ntBASIC1.15□□□□□ -2.23
O00370 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
O00370 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.15□□□□□ -2.23
O00370 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.15□□□□□ -2.23
O00370 BX284668.6-201ENST00000606899 438 ntBASIC1.15□□□□□ -2.23
O00370 Y_RNA.802-201ENST00000614892 130 ntBASIC1.15□□□□□ -2.23
O00370 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.23
O00370 Y_RNA.24-201ENST00000362508 103 ntBASIC1.14□□□□□ -2.23
O00370 SNORD114-27-201ENST00000363766 70 ntBASIC1.14□□□□□ -2.23
O00370 SNORA25-201ENST00000384384 134 ntBASIC1.14□□□□□ -2.23
O00370 Y_RNA.572-201ENST00000384757 98 ntBASIC1.14□□□□□ -2.23
O00370 AL358176.2-201ENST00000425769 204 ntBASIC1.14□□□□□ -2.23
O00370 COX6CP14-201ENST00000469580 174 ntBASIC1.14□□□□□ -2.23
O00370 RNU6-1045P-201ENST00000516321 107 ntBASIC1.14□□□□□ -2.23
O00370 RNU6-1007P-201ENST00000516586 107 ntBASIC1.14□□□□□ -2.23
O00370 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.14□□□□□ -2.23
O00370 SNORA4-201ENST00000584302 138 ntBASIC1.14□□□□□ -2.23
O00370 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.14□□□□□ -2.23
O00370 MIR4719-201ENST00000585233 84 ntBASIC1.14□□□□□ -2.23
O00370 AC008507.4-201ENST00000585464 127 ntBASIC1.14□□□□□ -2.23
O00370 AC087685.1-201ENST00000587507 141 ntBASIC1.14□□□□□ -2.23
O00370 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
O00370 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
O00370 UBE2WP1-201ENST00000362030 340 ntBASIC1.13□□□□□ -2.23
O00370 Y_RNA.288-201ENST00000364854 92 ntBASIC1.13□□□□□ -2.23
O00370 RNU6-472P-201ENST00000384299 107 ntBASIC1.13□□□□□ -2.23
O00370 MIR520C-201ENST00000385005 87 ntBASIC1.13□□□□□ -2.23
O00370 Y_RNA.587-201ENST00000391210 103 ntBASIC1.13□□□□□ -2.23
O00370 MIR1302-3-201ENST00000408128 138 ntBASIC1.13□□□□□ -2.23
O00370 AL096861.1-201ENST00000610899 123 ntBASIC1.13□□□□□ -2.23
O00370 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.13□□□□□ -2.23
O00370 Y_RNA.277-201ENST00000364754 102 ntBASIC1.12□□□□□ -2.23
O00370 SNORA8.3-201ENST00000384679 139 ntBASIC1.12□□□□□ -2.23
O00370 MIR15B-201ENST00000385045 98 ntBASIC1.12□□□□□ -2.23
O00370 RNU6-910P-201ENST00000390844 107 ntBASIC1.12□□□□□ -2.23
O00370 snoU13.18-201ENST00000459483 104 ntBASIC1.12□□□□□ -2.23
O00370 RNU7-149P-201ENST00000516739 59 ntBASIC1.12□□□□□ -2.23
O00370 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.12□□□□□ -2.23
O00370 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
O00370 AC012433.1-201ENST00000588916 398 ntBASIC1.12□□□□□ -2.23
O00370 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
O00370 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
O00370 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
O00370 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
O00370 SNORA25.3-201ENST00000363205 127 ntBASIC1.11□□□□□ -2.23
O00370 SNORD27-201ENST00000363981 72 ntBASIC1.11□□□□□ -2.23
O00370 SNORA70.7-201ENST00000384159 133 ntBASIC1.11□□□□□ -2.23
O00370 Y_RNA.477-201ENST00000384352 108 ntBASIC1.11□□□□□ -2.23
O00370 MIR570-201ENST00000384917 97 ntBASIC1.11□□□□□ -2.23
O00370 AL603910.2-201ENST00000407268 136 ntBASIC1.11□□□□□ -2.23
O00370 SNORD123-201ENST00000459473 70 ntBASIC1.11□□□□□ -2.23
O00370 uc_338.4-201ENST00000616635 176 ntBASIC1.11□□□□□ -2.23
O00370 MIR335-201ENST00000362173 94 ntBASIC1.1□□□□□ -2.23
O00370 RNU6-268P-201ENST00000364174 107 ntBASIC1.1□□□□□ -2.23
O00370 SNORA22-201ENST00000383907 134 ntBASIC1.1□□□□□ -2.23
O00370 SNORA22C-201ENST00000384614 134 ntBASIC1.1□□□□□ -2.23
O00370 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
O00370 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.1□□□□□ -2.23
O00370 MTCYBP9-201ENST00000431021 303 ntBASIC1.1□□□□□ -2.23
O00370 AC245047.8-201ENST00000456455 284 ntBASIC1.1□□□□□ -2.23
O00370 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
O00370 MTCO2P24-201ENST00000515611 426 ntBASIC1.1□□□□□ -2.23
O00370 SNORA31.4-201ENST00000516049 129 ntBASIC1.1□□□□□ -2.23
O00370 SNORA74.3-201ENST00000517108 154 ntBASIC1.1□□□□□ -2.23
O00370 SNORA70.22-201ENST00000517160 124 ntBASIC1.1□□□□□ -2.23
O00370 RNU7-181P-201ENST00000517234 74 ntBASIC1.1□□□□□ -2.23
O00370 MIR3192-201ENST00000584920 77 ntBASIC1.1□□□□□ -2.23
O00370 Pinc.1-201ENST00000616452 154 ntBASIC1.1□□□□□ -2.23
O00370 AC245047.7-201ENST00000440265 293 ntBASIC1.09□□□□□ -2.23
O00370 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.09□□□□□ -2.23
O00370 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 231.7 ms