Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNU6-1272P-201ENST00000362776 107 ntBASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 Y_RNA.393-201ENST00000383936 102 ntBASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-662P-201ENST00000384253 104 ntBASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 Y_RNA.518-201ENST00000384552 113 ntBASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 SNORD72-201ENST00000390994 80 ntBASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 MTCO2P33-201ENST00000402100 465 ntBASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC245047.7-201ENST00000440265 293 ntBASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC245047.8-201ENST00000456455 284 ntBASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU7-40P-201ENST00000516397 64 ntBASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 SNORA27.4-201ENST00000516650 95 ntBASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 SNORA40.15-201ENST00000516884 107 ntBASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC008507.4-201ENST00000585464 127 ntBASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 AL008718.3-201ENST00000610217 321 ntBASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC013791.1-201ENST00000616619 62 ntBASIC0.81□□□□□ -2.28
TMX2-CTNND1H3BSU7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 Y_RNA.376-201ENST00000365638 108 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-1160P-201ENST00000384546 104 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 MIR452-201ENST00000385020 85 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 MIR516B2-201ENST00000385190 85 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 MT-TW-201ENST00000387382 68 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-131P-201ENST00000391144 107 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 AL451046.2-201ENST00000403074 277 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 POLR2J4-204ENST00000418424 324 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 MTATP8P1-201ENST00000467115 207 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 SNORA31.2-201ENST00000516019 134 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-1338P-201ENST00000516328 91 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 SNORA74.3-201ENST00000517108 154 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 FAM71BP1-201ENST00000604431 523 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 AL022345.2-201ENST00000606307 135 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 AL391903.3-201ENST00000612158 163 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 MIR8065-201ENST00000620577 100 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 snoU18.1-201ENST00000629629 71 ntBASIC0.8□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU1-124P-201ENST00000363861 145 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-899P-201ENST00000363947 107 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-268P-201ENST00000364174 107 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 snoU2-30.1-201ENST00000365012 70 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-472P-201ENST00000384299 107 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-1248P-201ENST00000391096 64 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-383P-201ENST00000410864 94 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-651P-201ENST00000411040 105 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 SERF1AP1-201ENST00000514575 187 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU7-41P-201ENST00000515917 61 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-1143P-201ENST00000516125 104 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-830P-201ENST00000516353 107 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNA5SP404-201ENST00000517118 132 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 RPL23AP91-201ENST00000569211 455 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 MIR5692C2-201ENST00000577959 77 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 MIR4661-201ENST00000582720 75 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.79□□□□□ -2.28
TMX2-CTNND1H3BSU7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-1084P-201ENST00000362498 107 ntBASIC0.78□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-144P-201ENST00000383951 107 ntBASIC0.78□□□□□ -2.28
TMX2-CTNND1H3BSU7 SNORA25-201ENST00000384384 134 ntBASIC0.78□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-738P-201ENST00000384531 106 ntBASIC0.78□□□□□ -2.28
TMX2-CTNND1H3BSU7 MIR1302-7-201ENST00000408841 72 ntBASIC0.78□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-322P-201ENST00000516010 103 ntBASIC0.78□□□□□ -2.28
TMX2-CTNND1H3BSU7 SNORD79.1-201ENST00000516069 84 ntBASIC0.78□□□□□ -2.28
TMX2-CTNND1H3BSU7 Y_RNA.720-201ENST00000517166 92 ntBASIC0.78□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC133485.1-201ENST00000567176 124 ntBASIC0.78□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC138907.6-201ENST00000568401 126 ntBASIC0.78□□□□□ -2.28
TMX2-CTNND1H3BSU7 RN7SL793P-201ENST00000583259 296 ntBASIC0.78□□□□□ -2.28
TMX2-CTNND1H3BSU7 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
TMX2-CTNND1H3BSU7 Y_RNA.572-201ENST00000384757 98 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR19B1-201ENST00000384829 87 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR606-201ENST00000384851 96 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR216A-201ENST00000385063 110 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR136-201ENST00000385207 82 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU6-910P-201ENST00000390844 107 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORD28B-201ENST00000390993 75 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORD123-201ENST00000459473 70 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORA31.4-201ENST00000516049 129 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU6-947P-201ENST00000516264 106 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU6-570P-201ENST00000517051 105 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR548AR-201ENST00000582191 57 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 AC087685.1-201ENST00000587507 141 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 AL357312.1-201ENST00000603879 298 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.812-201ENST00000610788 101 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 AC006441.5-201ENST00000612680 209 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.784-201ENST00000613803 101 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.787-201ENST00000616522 101 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.780-201ENST00000617336 101 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.801-201ENST00000619005 101 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR6835-201ENST00000621552 64 ntBASIC0.77□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.117-201ENST00000363294 101 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.152-201ENST00000363578 100 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU4-10P-201ENST00000364383 140 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.237-201ENST00000364439 102 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.275-201ENST00000364726 110 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU1-36P-201ENST00000365130 165 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.422-201ENST00000384054 114 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 241.9 ms