Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MTCYBP4-201ENST00000401524 249 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 AL008987.1-201ENST00000415528 237 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 RPL30P16-201ENST00000419341 429 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 MTCO2P3-201ENST00000442543 421 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 RPL39P5-202ENST00000512505 151 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-732P-201ENST00000516033 103 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 SNORA25.17-201ENST00000517184 124 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 AC091144.1-201ENST00000519573 138 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 AC134698.4-201ENST00000523451 826 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 MIR4770-201ENST00000579149 58 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 AC008507.2-201ENST00000588402 1176 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 AL136370.1-201ENST00000608166 691 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 AC011603.4-201ENST00000611325 277 ntBASIC-1.66□□□□□ -2.68
UBE2D4Q9Y2X8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-973P-201ENST00000364690 107 ntBASIC-1.67□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-723P-201ENST00000383973 107 ntBASIC-1.67□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-468P-201ENST00000384003 109 ntBASIC-1.67□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-905P-201ENST00000384434 107 ntBASIC-1.67□□□□□ -2.68
UBE2D4Q9Y2X8 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.67□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-131P-201ENST00000391144 107 ntBASIC-1.67□□□□□ -2.68
UBE2D4Q9Y2X8 MIR450B-201ENST00000401182 78 ntBASIC-1.67□□□□□ -2.68
UBE2D4Q9Y2X8 RNU2-29P-201ENST00000410423 189 ntBASIC-1.67□□□□□ -2.68
UBE2D4Q9Y2X8 AC016907.1-201ENST00000419483 435 ntBASIC-1.67□□□□□ -2.68
UBE2D4Q9Y2X8 RPS29P24-201ENST00000486345 171 ntBASIC-1.67□□□□□ -2.68
UBE2D4Q9Y2X8 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.67□□□□□ -2.68
UBE2D4Q9Y2X8 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.67□□□□□ -2.68
UBE2D4Q9Y2X8 AC022418.1-201ENST00000624118 445 ntBASIC-1.67□□□□□ -2.68
UBE2D4Q9Y2X8 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.68□□□□□ -2.68
UBE2D4Q9Y2X8 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.68□□□□□ -2.68
UBE2D4Q9Y2X8 SNORA49-201ENST00000386157 136 ntBASIC-1.68□□□□□ -2.68
UBE2D4Q9Y2X8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.68□□□□□ -2.68
UBE2D4Q9Y2X8 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.68□□□□□ -2.68
UBE2D4Q9Y2X8 AC073464.1-201ENST00000429823 534 ntBASIC-1.68□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.68□□□□□ -2.68
UBE2D4Q9Y2X8 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.68□□□□□ -2.68
UBE2D4Q9Y2X8 AP003733.2-201ENST00000529409 171 ntBASIC-1.68□□□□□ -2.68
UBE2D4Q9Y2X8 POLR3GP2-201ENST00000588366 668 ntBASIC-1.68□□□□□ -2.68
UBE2D4Q9Y2X8 TUSC7.1-201ENST00000610969 165 ntBASIC-1.68□□□□□ -2.68
UBE2D4Q9Y2X8 MIR6854-201ENST00000614935 69 ntBASIC-1.68□□□□□ -2.68
UBE2D4Q9Y2X8 RNU1-141P-201ENST00000364623 158 ntBASIC-1.69□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.69□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-154P-201ENST00000384306 106 ntBASIC-1.69□□□□□ -2.68
UBE2D4Q9Y2X8 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.69□□□□□ -2.68
UBE2D4Q9Y2X8 MTCYBP36-201ENST00000404146 440 ntBASIC-1.69□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.69□□□□□ -2.68
UBE2D4Q9Y2X8 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.69□□□□□ -2.68
UBE2D4Q9Y2X8 MTND1P35-201ENST00000526739 508 ntBASIC-1.69□□□□□ -2.68
UBE2D4Q9Y2X8 AC245014.2-201ENST00000603689 287 ntBASIC-1.69□□□□□ -2.68
UBE2D4Q9Y2X8 SNORD14E-201ENST00000364009 85 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 SNORD115-7-201ENST00000365306 82 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 SNORA40.2-201ENST00000390847 128 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-298P-201ENST00000390888 96 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 AL353813.1-201ENST00000440700 253 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 RPL39P25-201ENST00000449384 154 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 SNORA40.17-201ENST00000517256 115 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 AC022616.6-201ENST00000520479 119 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 MTND1P24-201ENST00000552175 861 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 AC002044.1-201ENST00000606707 158 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 AC131235.4-201ENST00000609288 620 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 AP001282.2-201ENST00000616149 309 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 AC097460.3-201ENST00000623099 442 ntBASIC-1.7□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-268P-201ENST00000364174 107 ntBASIC-1.71□□□□□ -2.68
UBE2D4Q9Y2X8 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.71□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-550P-201ENST00000391057 101 ntBASIC-1.71□□□□□ -2.68
UBE2D4Q9Y2X8 MIR889-201ENST00000401280 79 ntBASIC-1.71□□□□□ -2.68
UBE2D4Q9Y2X8 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.71□□□□□ -2.68
UBE2D4Q9Y2X8 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.71□□□□□ -2.68
UBE2D4Q9Y2X8 AC091179.3-201ENST00000474761 144 ntBASIC-1.71□□□□□ -2.68
UBE2D4Q9Y2X8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.71□□□□□ -2.68
UBE2D4Q9Y2X8 AL662814.1-201ENST00000617364 121 ntBASIC-1.71□□□□□ -2.68
UBE2D4Q9Y2X8 SNORD115-8-201ENST00000363856 82 ntBASIC-1.72□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-560P-201ENST00000364007 108 ntBASIC-1.72□□□□□ -2.68
UBE2D4Q9Y2X8 SNORD115-38-201ENST00000365037 82 ntBASIC-1.72□□□□□ -2.68
UBE2D4Q9Y2X8 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.72□□□□□ -2.68
UBE2D4Q9Y2X8 MTND3P9-201ENST00000429526 346 ntBASIC-1.72□□□□□ -2.68
UBE2D4Q9Y2X8 MTND1P11-201ENST00000456661 876 ntBASIC-1.72□□□□□ -2.68
UBE2D4Q9Y2X8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.72□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-983P-201ENST00000516004 103 ntBASIC-1.72□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-107P-201ENST00000516643 102 ntBASIC-1.72□□□□□ -2.68
UBE2D4Q9Y2X8 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.72□□□□□ -2.68
UBE2D4Q9Y2X8 MIR4520-1-201ENST00000582609 70 ntBASIC-1.72□□□□□ -2.68
UBE2D4Q9Y2X8 MIR4307-201ENST00000582802 84 ntBASIC-1.72□□□□□ -2.68
UBE2D4Q9Y2X8 SNORD115-25-201ENST00000362619 82 ntBASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 SNORD114-17-201ENST00000364699 75 ntBASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 RNU6-224P-201ENST00000384055 107 ntBASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 MIR527-201ENST00000385244 85 ntBASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.73□□□□□ -2.69
UBE2D4Q9Y2X8 RPL30P15-201ENST00000457129 321 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms