Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AC004812.1-201ENST00000540773 146 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 MIR3199-1-201ENST00000582434 88 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 MIR4777-201ENST00000583710 86 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 UBL5P2-201ENST00000583788 219 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 MIR5739-201ENST00000619803 80 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 AC064859.1-201ENST00000624741 174 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 MIR6733-201ENST00000635723 61 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 AC091304.10-201ENST00000641554 121 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 AL355596.1-201ENST00000565399 3996 ntBASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 AC073325.2-201ENST00000339545 159 ntBASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 MIR342-201ENST00000362212 99 ntBASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 RNU6-60P-201ENST00000364792 103 ntBASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 Y_RNA.336-201ENST00000365307 109 ntBASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 SNORA8-201ENST00000384574 139 ntBASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 RN7SKP220-201ENST00000410611 288 ntBASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 RNU7-94P-201ENST00000459576 63 ntBASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 MIR4666B-201ENST00000578142 81 ntBASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 MIR7157-201ENST00000635801 60 ntBASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 AC108206.1-201ENST00000570186 4159 ntBASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
NUCKS1Q9H1E3 AL161431.1-201ENST00000618966 4205 ntBASIC3.25□□□□□ -1.89
NUCKS1Q9H1E3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NUCKS1Q9H1E3 Y_RNA.190-201ENST00000363964 101 ntBASIC3.25□□□□□ -1.89
NUCKS1Q9H1E3 Y_RNA.313-201ENST00000365095 103 ntBASIC3.25□□□□□ -1.89
NUCKS1Q9H1E3 SNORA18-201ENST00000384416 132 ntBASIC3.25□□□□□ -1.89
NUCKS1Q9H1E3 SNORD116-22-201ENST00000384430 92 ntBASIC3.25□□□□□ -1.89
NUCKS1Q9H1E3 RNU6-857P-201ENST00000515893 110 ntBASIC3.25□□□□□ -1.89
NUCKS1Q9H1E3 SNORA31.4-201ENST00000516049 129 ntBASIC3.25□□□□□ -1.89
NUCKS1Q9H1E3 RNU6-267P-201ENST00000516714 103 ntBASIC3.25□□□□□ -1.89
NUCKS1Q9H1E3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.25□□□□□ -1.89
NUCKS1Q9H1E3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 SNORD115-13-201ENST00000363358 82 ntBASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 SNORD115-16-201ENST00000363887 82 ntBASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 RNU6-219P-201ENST00000364728 107 ntBASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 SNORD115-1-201ENST00000364961 82 ntBASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 SNORD115-35-201ENST00000365122 82 ntBASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 SNORA80E-201ENST00000384744 137 ntBASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 MIR483-201ENST00000385070 76 ntBASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 SNORD67-201ENST00000390833 111 ntBASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 AL022718.1-201ENST00000412004 84 ntBASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 AL035398.1-201ENST00000430869 322 ntBASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 RNU7-171P-201ENST00000459581 62 ntBASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 SEM1P1-201ENST00000506694 209 ntBASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 SNORA48.11-201ENST00000517015 89 ntBASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 CTSLP2-204ENST00000629029 392 ntBASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NUCKS1Q9H1E3 AC009487.2-201ENST00000420969 6821 ntBASIC3.23□□□□□ -1.89
NUCKS1Q9H1E3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.23□□□□□ -1.89
NUCKS1Q9H1E3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NUCKS1Q9H1E3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
NUCKS1Q9H1E3 MIR22-201ENST00000362190 85 ntBASIC3.23□□□□□ -1.89
NUCKS1Q9H1E3 Y_RNA.437-201ENST00000384113 113 ntBASIC3.23□□□□□ -1.89
NUCKS1Q9H1E3 MIR128-1-201ENST00000384921 82 ntBASIC3.23□□□□□ -1.89
NUCKS1Q9H1E3 SNORA48.2-201ENST00000390926 124 ntBASIC3.23□□□□□ -1.89
NUCKS1Q9H1E3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.23□□□□□ -1.89
NUCKS1Q9H1E3 RPS29P12-201ENST00000460178 152 ntBASIC3.23□□□□□ -1.89
NUCKS1Q9H1E3 CKS1BP2-201ENST00000497342 240 ntBASIC3.23□□□□□ -1.89
NUCKS1Q9H1E3 AC007318.2-201ENST00000620999 243 ntBASIC3.23□□□□□ -1.89
NUCKS1Q9H1E3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
NUCKS1Q9H1E3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.22□□□□□ -1.89
NUCKS1Q9H1E3 Y_RNA.96-201ENST00000363092 109 ntBASIC3.22□□□□□ -1.89
NUCKS1Q9H1E3 SNORD45B-201ENST00000364617 72 ntBASIC3.22□□□□□ -1.89
NUCKS1Q9H1E3 RNU6-679P-201ENST00000391003 106 ntBASIC3.22□□□□□ -1.89
NUCKS1Q9H1E3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.22□□□□□ -1.89
NUCKS1Q9H1E3 CYP2C59P-201ENST00000457790 269 ntBASIC3.22□□□□□ -1.89
NUCKS1Q9H1E3 RNU2-11P-201ENST00000459191 187 ntBASIC3.22□□□□□ -1.89
NUCKS1Q9H1E3 TRBV12-1-201ENST00000479785 344 ntBASIC3.22□□□□□ -1.89
NUCKS1Q9H1E3 AL163195.1-201ENST00000496941 348 ntBASIC3.22□□□□□ -1.89
NUCKS1Q9H1E3 AC008885.1-201ENST00000514930 301 ntBASIC3.22□□□□□ -1.89
NUCKS1Q9H1E3 RNU6-826P-201ENST00000516827 104 ntBASIC3.22□□□□□ -1.89
NUCKS1Q9H1E3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.22□□□□□ -1.89
NUCKS1Q9H1E3 AC107016.2-201ENST00000547968 190 ntBASIC3.22□□□□□ -1.89
NUCKS1Q9H1E3 MIR7515-201ENST00000637837 67 ntBASIC3.22□□□□□ -1.89
NUCKS1Q9H1E3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
NUCKS1Q9H1E3 Y_RNA.95-201ENST00000363079 95 ntBASIC3.21□□□□□ -1.9
NUCKS1Q9H1E3 SNORA54-201ENST00000384281 123 ntBASIC3.21□□□□□ -1.9
NUCKS1Q9H1E3 SNORA27-201ENST00000384323 126 ntBASIC3.21□□□□□ -1.9
NUCKS1Q9H1E3 SNORD88.1-201ENST00000408684 91 ntBASIC3.21□□□□□ -1.9
NUCKS1Q9H1E3 SNORA7.5-201ENST00000410672 110 ntBASIC3.21□□□□□ -1.9
NUCKS1Q9H1E3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
NUCKS1Q9H1E3 RNA5SP341-201ENST00000516261 117 ntBASIC3.21□□□□□ -1.9
NUCKS1Q9H1E3 AC024995.1-201ENST00000523014 93 ntBASIC3.21□□□□□ -1.9
NUCKS1Q9H1E3 MIR4325-201ENST00000583049 90 ntBASIC3.21□□□□□ -1.9
NUCKS1Q9H1E3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.21□□□□□ -1.9
NUCKS1Q9H1E3 AL356280.1-201ENST00000603614 379 ntBASIC3.21□□□□□ -1.9
NUCKS1Q9H1E3 AC005000.2-201ENST00000605468 310 ntBASIC3.21□□□□□ -1.9
NUCKS1Q9H1E3 AC021613.1-201ENST00000623880 111 ntBASIC3.21□□□□□ -1.9
NUCKS1Q9H1E3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.2□□□□□ -1.9
NUCKS1Q9H1E3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.2□□□□□ -1.9
NUCKS1Q9H1E3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.2□□□□□ -1.9
NUCKS1Q9H1E3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms