Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 Y_RNA.478-201ENST00000384358 107 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.539-201ENST00000384635 107 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 MIR194-1-201ENST00000384892 85 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 STAG3L5P-204ENST00000443759 179 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.650-201ENST00000459002 102 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 RNU6-1023P-201ENST00000516137 106 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.777-201ENST00000516982 102 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 MIR4422-201ENST00000581938 83 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.771-201ENST00000598668 102 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.789-201ENST00000622480 102 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 MIR126-201ENST00000362291 85 ntBASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 U8.1-201ENST00000362843 134 ntBASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 RNA5SP325-201ENST00000363756 130 ntBASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.293-201ENST00000364908 93 ntBASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 RNU6-338P-201ENST00000383888 105 ntBASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 RNU6-342P-201ENST00000384521 104 ntBASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 AL161935.2-201ENST00000414627 60 ntBASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 SNORD2.1-201ENST00000458762 69 ntBASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 OR9P1P-201ENST00000496431 281 ntBASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 MIR4282-201ENST00000583613 67 ntBASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 AC005357.1-201ENST00000588399 301 ntBASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.49□□□□□ -2.17
RTP3Q9BQQ7 MIR424-201ENST00000362227 98 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 RNU4-10P-201ENST00000364383 140 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 RNU4-41P-201ENST00000364426 143 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 RNU6-144P-201ENST00000383951 107 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.489-201ENST00000384410 101 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 AL034345.1-201ENST00000407768 123 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 MIR1267-201ENST00000408723 78 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 MIR1278-201ENST00000408753 81 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 Z98949.2-201ENST00000440996 144 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 RPS29P29-201ENST00000456396 171 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 snoU13.9-201ENST00000458927 103 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 RNU6-437P-201ENST00000459408 95 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 AC005908.1-201ENST00000468701 347 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 SNORD116-28-201ENST00000516123 91 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 RNU6-970P-201ENST00000516312 107 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 RNU7-28P-201ENST00000516759 62 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 RNU6-111P-201ENST00000517179 105 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 SNORA28-201ENST00000606769 126 ntBASIC1.48□□□□□ -2.17
RTP3Q9BQQ7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
RTP3Q9BQQ7 RNU6-379P-201ENST00000363813 104 ntBASIC1.47□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.203-201ENST00000364106 102 ntBASIC1.47□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.292-201ENST00000364904 97 ntBASIC1.47□□□□□ -2.17
RTP3Q9BQQ7 MT-TG-201ENST00000387429 68 ntBASIC1.47□□□□□ -2.17
RTP3Q9BQQ7 RNA5SP482-201ENST00000391269 118 ntBASIC1.47□□□□□ -2.17
RTP3Q9BQQ7 RNU6-383P-201ENST00000410864 94 ntBASIC1.47□□□□□ -2.17
RTP3Q9BQQ7 AC023790.1-201ENST00000482174 347 ntBASIC1.47□□□□□ -2.17
RTP3Q9BQQ7 AL591926.4-201ENST00000616895 298 ntBASIC1.47□□□□□ -2.17
RTP3Q9BQQ7 AC073349.3-201ENST00000617616 186 ntBASIC1.47□□□□□ -2.17
RTP3Q9BQQ7 AP000648.3-201ENST00000623539 4507 ntBASIC1.47□□□□□ -2.17
RTP3Q9BQQ7 MIR96-201ENST00000362288 78 ntBASIC1.46□□□□□ -2.18
RTP3Q9BQQ7 RNU6-674P-201ENST00000363831 107 ntBASIC1.46□□□□□ -2.18
RTP3Q9BQQ7 RNU1-93P-201ENST00000364704 169 ntBASIC1.46□□□□□ -2.18
RTP3Q9BQQ7 Y_RNA.476-201ENST00000384347 108 ntBASIC1.46□□□□□ -2.18
RTP3Q9BQQ7 SNORD58.1-201ENST00000391313 66 ntBASIC1.46□□□□□ -2.18
RTP3Q9BQQ7 MLLT10P1-201ENST00000418346 262 ntBASIC1.46□□□□□ -2.18
RTP3Q9BQQ7 SNRPGP13-201ENST00000442212 177 ntBASIC1.46□□□□□ -2.18
RTP3Q9BQQ7 RNA5SP61-201ENST00000516453 100 ntBASIC1.46□□□□□ -2.18
RTP3Q9BQQ7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.46□□□□□ -2.18
RTP3Q9BQQ7 AL442067.1-201ENST00000613261 223 ntBASIC1.46□□□□□ -2.18
RTP3Q9BQQ7 PVT1_3.1-201ENST00000620853 95 ntBASIC1.46□□□□□ -2.18
RTP3Q9BQQ7 AL365265.1-201ENST00000621045 234 ntBASIC1.46□□□□□ -2.18
RTP3Q9BQQ7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.46□□□□□ -2.18
RTP3Q9BQQ7 MIRLET7C-201ENST00000362160 84 ntBASIC1.45□□□□□ -2.18
RTP3Q9BQQ7 SNORD68-201ENST00000363214 84 ntBASIC1.45□□□□□ -2.18
RTP3Q9BQQ7 Y_RNA.253-201ENST00000364562 112 ntBASIC1.45□□□□□ -2.18
RTP3Q9BQQ7 RNU6-997P-201ENST00000384725 107 ntBASIC1.45□□□□□ -2.18
RTP3Q9BQQ7 MIR598-201ENST00000384868 97 ntBASIC1.45□□□□□ -2.18
RTP3Q9BQQ7 RNU1-78P-201ENST00000391248 165 ntBASIC1.45□□□□□ -2.18
RTP3Q9BQQ7 CALM2P4-201ENST00000430810 426 ntBASIC1.45□□□□□ -2.18
RTP3Q9BQQ7 PGBD4P5-201ENST00000445958 426 ntBASIC1.45□□□□□ -2.18
RTP3Q9BQQ7 AC004223.1-201ENST00000479840 271 ntBASIC1.45□□□□□ -2.18
RTP3Q9BQQ7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.45□□□□□ -2.18
RTP3Q9BQQ7 RNA5SP168-201ENST00000516642 112 ntBASIC1.45□□□□□ -2.18
RTP3Q9BQQ7 AC011921.3-201ENST00000605540 361 ntBASIC1.45□□□□□ -2.18
RTP3Q9BQQ7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.45□□□□□ -2.18
RTP3Q9BQQ7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
RTP3Q9BQQ7 RNU6-1123P-201ENST00000362347 106 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 Y_RNA.24-201ENST00000362508 103 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 RNU6-1209P-201ENST00000363655 107 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 RNY4P28-201ENST00000365281 93 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 RNU6-424P-201ENST00000384367 105 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 Y_RNA.572-201ENST00000384757 98 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 U8.16-201ENST00000391279 133 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 SNRPGP10-201ENST00000432323 225 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 248.3 ms