Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.05□□□□□ -2.08
TIMP4Q99727 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.05□□□□□ -2.08
TIMP4Q99727 MIR4648-201ENST00000580107 72 ntBASIC2.05□□□□□ -2.08
TIMP4Q99727 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.05□□□□□ -2.08
TIMP4Q99727 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.05□□□□□ -2.08
TIMP4Q99727 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.04□□□□□ -2.08
TIMP4Q99727 Y_RNA.52-201ENST00000362760 96 ntBASIC2.04□□□□□ -2.08
TIMP4Q99727 RNU6-215P-201ENST00000365169 102 ntBASIC2.04□□□□□ -2.08
TIMP4Q99727 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.04□□□□□ -2.08
TIMP4Q99727 AL606517.2-201ENST00000442855 241 ntBASIC2.04□□□□□ -2.08
TIMP4Q99727 RN7SKP179-201ENST00000516126 217 ntBASIC2.04□□□□□ -2.08
TIMP4Q99727 RNU6-1061P-201ENST00000516530 99 ntBASIC2.04□□□□□ -2.08
TIMP4Q99727 RNU2-60P-201ENST00000517290 128 ntBASIC2.04□□□□□ -2.08
TIMP4Q99727 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.04□□□□□ -2.08
TIMP4Q99727 AL358944.1-201ENST00000528537 144 ntBASIC2.04□□□□□ -2.08
TIMP4Q99727 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.04□□□□□ -2.08
TIMP4Q99727 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TIMP4Q99727 AC133485.4-201ENST00000561835 220 ntBASIC2.04□□□□□ -2.08
TIMP4Q99727 AC138907.4-201ENST00000570107 226 ntBASIC2.04□□□□□ -2.08
TIMP4Q99727 MIR3121-201ENST00000579680 77 ntBASIC2.04□□□□□ -2.08
TIMP4Q99727 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
TIMP4Q99727 MIR6766-201ENST00000622641 72 ntBASIC2.04□□□□□ -2.08
TIMP4Q99727 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.04□□□□□ -2.08
TIMP4Q99727 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
TIMP4Q99727 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.04□□□□□ -2.08
TIMP4Q99727 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
TIMP4Q99727 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
TIMP4Q99727 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.03□□□□□ -2.08
TIMP4Q99727 Y_RNA.265-201ENST00000364677 108 ntBASIC2.03□□□□□ -2.08
TIMP4Q99727 MIR624-201ENST00000385217 97 ntBASIC2.03□□□□□ -2.08
TIMP4Q99727 AL035461.1-201ENST00000421490 332 ntBASIC2.03□□□□□ -2.08
TIMP4Q99727 AC245047.3-201ENST00000429428 127 ntBASIC2.03□□□□□ -2.08
TIMP4Q99727 FTH1P12-201ENST00000432137 551 ntBASIC2.03□□□□□ -2.08
TIMP4Q99727 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TIMP4Q99727 AL158147.1-201ENST00000443970 75 ntBASIC2.03□□□□□ -2.08
TIMP4Q99727 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.03□□□□□ -2.08
TIMP4Q99727 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.03□□□□□ -2.08
TIMP4Q99727 MIR6873-201ENST00000622788 63 ntBASIC2.03□□□□□ -2.08
TIMP4Q99727 AC022513.1-201ENST00000624512 117 ntBASIC2.03□□□□□ -2.08
TIMP4Q99727 AP000553.5-201ENST00000641933 54 ntBASIC2.03□□□□□ -2.08
TIMP4Q99727 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
TIMP4Q99727 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
TIMP4Q99727 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TIMP4Q99727 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TIMP4Q99727 RNU1-58P-201ENST00000362413 163 ntBASIC2.02□□□□□ -2.09
TIMP4Q99727 RNU6-1056P-201ENST00000383996 107 ntBASIC2.02□□□□□ -2.09
TIMP4Q99727 RNU1-148P-201ENST00000384472 162 ntBASIC2.02□□□□□ -2.09
TIMP4Q99727 MIR221-201ENST00000385135 110 ntBASIC2.02□□□□□ -2.09
TIMP4Q99727 AL603914.1-201ENST00000401964 204 ntBASIC2.02□□□□□ -2.09
TIMP4Q99727 SNORA11.4-201ENST00000408823 129 ntBASIC2.02□□□□□ -2.09
TIMP4Q99727 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.02□□□□□ -2.09
TIMP4Q99727 AL158823.1-201ENST00000418441 478 ntBASIC2.02□□□□□ -2.09
TIMP4Q99727 RNU6-772P-201ENST00000516042 105 ntBASIC2.02□□□□□ -2.09
TIMP4Q99727 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.02□□□□□ -2.09
TIMP4Q99727 MIR5094-201ENST00000578766 85 ntBASIC2.02□□□□□ -2.09
TIMP4Q99727 AL365205.2-201ENST00000594586 68 ntBASIC2.02□□□□□ -2.09
TIMP4Q99727 MTND5P32-201ENST00000560711 1802 ntBASIC2.02□□□□□ -2.09
TIMP4Q99727 AP006437.1-201ENST00000641440 3685 ntBASIC2.01□□□□□ -2.09
TIMP4Q99727 MIR597-201ENST00000384968 97 ntBASIC2.01□□□□□ -2.09
TIMP4Q99727 RNU11-3P-201ENST00000391111 133 ntBASIC2.01□□□□□ -2.09
TIMP4Q99727 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.01□□□□□ -2.09
TIMP4Q99727 SNRPGP13-201ENST00000442212 177 ntBASIC2.01□□□□□ -2.09
TIMP4Q99727 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.01□□□□□ -2.09
TIMP4Q99727 RNU6-919P-201ENST00000516731 104 ntBASIC2.01□□□□□ -2.09
TIMP4Q99727 IGLV3-17-201ENST00000519099 244 ntBASIC2.01□□□□□ -2.09
TIMP4Q99727 MTND5P34-201ENST00000568888 325 ntBASIC2.01□□□□□ -2.09
TIMP4Q99727 AL022345.2-201ENST00000606307 135 ntBASIC2.01□□□□□ -2.09
TIMP4Q99727 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
TIMP4Q99727 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
TIMP4Q99727 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TIMP4Q99727 AL596028.1-201ENST00000326971 197 ntBASIC2□□□□□ -2.09
TIMP4Q99727 RNU6-888P-201ENST00000363010 101 ntBASIC2□□□□□ -2.09
TIMP4Q99727 SNORD14E-201ENST00000364009 85 ntBASIC2□□□□□ -2.09
TIMP4Q99727 SNORD24-201ENST00000383884 75 ntBASIC2□□□□□ -2.09
TIMP4Q99727 MIR29C-201ENST00000385231 88 ntBASIC2□□□□□ -2.09
TIMP4Q99727 SNORD77.3-201ENST00000391113 65 ntBASIC2□□□□□ -2.09
TIMP4Q99727 MIR891A-201ENST00000401237 79 ntBASIC2□□□□□ -2.09
TIMP4Q99727 SNORD23.1-201ENST00000408212 104 ntBASIC2□□□□□ -2.09
TIMP4Q99727 RNU6-1064P-201ENST00000410626 104 ntBASIC2□□□□□ -2.09
TIMP4Q99727 STAG3L5P-204ENST00000443759 179 ntBASIC2□□□□□ -2.09
TIMP4Q99727 AC084364.2-201ENST00000546924 395 ntBASIC2□□□□□ -2.09
TIMP4Q99727 AC087685.1-201ENST00000587507 141 ntBASIC2□□□□□ -2.09
TIMP4Q99727 MIR6129-201ENST00000616087 109 ntBASIC2□□□□□ -2.09
TIMP4Q99727 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TIMP4Q99727 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
TIMP4Q99727 snoU2-30.1-201ENST00000365012 70 ntBASIC1.99□□□□□ -2.09
TIMP4Q99727 Y_RNA.563-201ENST00000384707 108 ntBASIC1.99□□□□□ -2.09
TIMP4Q99727 MIR548A2-201ENST00000384956 97 ntBASIC1.99□□□□□ -2.09
TIMP4Q99727 RNU6-440P-201ENST00000390882 105 ntBASIC1.99□□□□□ -2.09
TIMP4Q99727 SNORA40.5-201ENST00000391061 128 ntBASIC1.99□□□□□ -2.09
TIMP4Q99727 Y_RNA.630-201ENST00000411370 108 ntBASIC1.99□□□□□ -2.09
TIMP4Q99727 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.99□□□□□ -2.09
TIMP4Q99727 AF228730.3-201ENST00000436691 102 ntBASIC1.99□□□□□ -2.09
TIMP4Q99727 MTATP6P21-201ENST00000440681 189 ntBASIC1.99□□□□□ -2.09
TIMP4Q99727 snoU13.15-201ENST00000459407 104 ntBASIC1.99□□□□□ -2.09
TIMP4Q99727 AC079804.2-201ENST00000490376 200 ntBASIC1.99□□□□□ -2.09
TIMP4Q99727 SNORD45.4-201ENST00000516629 73 ntBASIC1.99□□□□□ -2.09
TIMP4Q99727 Y_RNA.712-201ENST00000517011 92 ntBASIC1.99□□□□□ -2.09
TIMP4Q99727 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.99□□□□□ -2.09
TIMP4Q99727 AC005786.1-201ENST00000588553 154 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 238.3 ms