Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 Y_RNA.621-201ENST00000411065 96 ntBASIC1.73□□□□□ -2.13
PKP4Q99569 AC099677.2-201ENST00000436385 175 ntBASIC1.73□□□□□ -2.13
PKP4Q99569 AC023449.1-201ENST00000454464 154 ntBASIC1.73□□□□□ -2.13
PKP4Q99569 HMGN2P23-201ENST00000456759 269 ntBASIC1.73□□□□□ -2.13
PKP4Q99569 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.73□□□□□ -2.13
PKP4Q99569 RNU6-406P-201ENST00000516470 107 ntBASIC1.73□□□□□ -2.13
PKP4Q99569 RPL23AP91-201ENST00000569211 455 ntBASIC1.73□□□□□ -2.13
PKP4Q99569 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PKP4Q99569 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
PKP4Q99569 RNU6-112P-201ENST00000363599 104 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 RNU6-1209P-201ENST00000363655 107 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 Y_RNA.796-201ENST00000364268 102 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 Y_RNA.799-201ENST00000364992 102 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 RNU6-643P-201ENST00000384018 107 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 RNU6-482P-201ENST00000391068 107 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 RNU2-55P-201ENST00000411146 174 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 AC006461.1-201ENST00000412637 326 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.72□□□□□ -2.13
PKP4Q99569 AC233266.1-201ENST00000454518 96 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 AL163195.1-201ENST00000496941 348 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 RNU6-561P-201ENST00000516222 102 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 RNU6-346P-201ENST00000516288 111 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 RNU6-1291P-201ENST00000516591 104 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 RNU6-295P-201ENST00000516901 104 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 SNORA31.17-201ENST00000516953 127 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 MIR4769-201ENST00000584126 77 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 AL049861.1-201ENST00000603130 150 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 AC242852.1-201ENST00000612151 96 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 MIR6845-201ENST00000613182 61 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 JPX_2.1-201ENST00000614161 69 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 AC244015.1-201ENST00000622301 99 ntBASIC1.72□□□□□ -2.13
PKP4Q99569 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
PKP4Q99569 RNA5SP432-201ENST00000362480 116 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 Y_RNA.267-201ENST00000364679 109 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 Y_RNA.337-201ENST00000365312 102 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 Y_RNA.400-201ENST00000383963 111 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 RNU6-1080P-201ENST00000383982 107 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 MIR613-201ENST00000385248 95 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 SNORA26.9-201ENST00000391322 122 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 SNORA79-201ENST00000408376 140 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 Y_RNA.622-201ENST00000411091 108 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 SNRPGP8-201ENST00000454064 226 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 SNORD11-201ENST00000459124 84 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 AC015712.3-201ENST00000559380 164 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 MIR8074-201ENST00000615081 81 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 uc_338.4-201ENST00000616635 176 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 Y_RNA.778-201ENST00000620203 90 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 AC084768.2-201ENST00000622736 221 ntBASIC1.71□□□□□ -2.14
PKP4Q99569 SNORD45.3-201ENST00000363836 72 ntBASIC1.7□□□□□ -2.14
PKP4Q99569 SNORD50.2-201ENST00000365465 70 ntBASIC1.7□□□□□ -2.14
PKP4Q99569 HMGN1P7-201ENST00000491722 313 ntBASIC1.7□□□□□ -2.14
PKP4Q99569 SNORD77.4-201ENST00000516158 81 ntBASIC1.7□□□□□ -2.14
PKP4Q99569 RNU6-1299P-201ENST00000516316 100 ntBASIC1.7□□□□□ -2.14
PKP4Q99569 AP002004.2-201ENST00000531656 154 ntBASIC1.7□□□□□ -2.14
PKP4Q99569 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.7□□□□□ -2.14
PKP4Q99569 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
PKP4Q99569 MIR3910-1-201ENST00000580936 111 ntBASIC1.7□□□□□ -2.14
PKP4Q99569 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
PKP4Q99569 DNAJC19P2-201ENST00000593340 302 ntBASIC1.7□□□□□ -2.14
PKP4Q99569 AC069114.2-201ENST00000604699 304 ntBASIC1.7□□□□□ -2.14
PKP4Q99569 MIR424-201ENST00000362227 98 ntBASIC1.69□□□□□ -2.14
PKP4Q99569 RNU6-151P-201ENST00000364158 107 ntBASIC1.69□□□□□ -2.14
PKP4Q99569 Y_RNA.432-201ENST00000384087 111 ntBASIC1.69□□□□□ -2.14
PKP4Q99569 RNU6-296P-201ENST00000384608 107 ntBASIC1.69□□□□□ -2.14
PKP4Q99569 AL160236.1-201ENST00000556317 195 ntBASIC1.69□□□□□ -2.14
PKP4Q99569 MIR5094-201ENST00000578766 85 ntBASIC1.69□□□□□ -2.14
PKP4Q99569 MIR3618-201ENST00000580330 88 ntBASIC1.69□□□□□ -2.14
PKP4Q99569 MIR8081-201ENST00000611533 95 ntBASIC1.69□□□□□ -2.14
PKP4Q99569 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.69□□□□□ -2.14
PKP4Q99569 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
PKP4Q99569 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
PKP4Q99569 SNORA1B-201ENST00000362535 133 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 RNU6-704P-201ENST00000364162 103 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 Y_RNA.215-201ENST00000364204 112 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 RNU6-1019P-201ENST00000364424 107 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 Y_RNA.253-201ENST00000364562 112 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 SNORD48-201ENST00000364953 64 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 RNU6-484P-201ENST00000384016 107 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 Y_RNA.488-201ENST00000384403 102 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
PKP4Q99569 SNRPGP10-201ENST00000432323 225 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 TMSB4XP3-201ENST00000445144 114 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 AL049830.1-201ENST00000468034 425 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 OR9P1P-201ENST00000496431 281 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 SNORD116-25-201ENST00000516517 92 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 RNU6-197P-201ENST00000516680 100 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 RNU6-126P-201ENST00000516685 103 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 RNU7-149P-201ENST00000516739 59 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.68□□□□□ -2.14
PKP4Q99569 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
PKP4Q99569 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.68□□□□□ -2.14
PKP4Q99569 Y_RNA.343-201ENST00000365354 112 ntBASIC1.67□□□□□ -2.14
PKP4Q99569 RNU6-1138P-201ENST00000365359 106 ntBASIC1.67□□□□□ -2.14
PKP4Q99569 Y_RNA.521-201ENST00000384560 114 ntBASIC1.67□□□□□ -2.14
PKP4Q99569 SNORA26-201ENST00000391286 122 ntBASIC1.67□□□□□ -2.14
PKP4Q99569 RPS27P1-201ENST00000450552 247 ntBASIC1.67□□□□□ -2.14
PKP4Q99569 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.67□□□□□ -2.14
PKP4Q99569 RNA5SP153-201ENST00000516498 76 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms