Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 Z96811.1-201ENST00000445880 108 ntBASIC3.04□□□□□ -1.92
IFT43Q96FT9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.04□□□□□ -1.92
IFT43Q96FT9 AC114811.1-201ENST00000507207 168 ntBASIC3.04□□□□□ -1.92
IFT43Q96FT9 MIR3163-201ENST00000581592 73 ntBASIC3.04□□□□□ -1.92
IFT43Q96FT9 AC022202.1-201ENST00000613515 211 ntBASIC3.04□□□□□ -1.92
IFT43Q96FT9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
IFT43Q96FT9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
IFT43Q96FT9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
IFT43Q96FT9 RNU6-1019P-201ENST00000364424 107 ntBASIC3.03□□□□□ -1.92
IFT43Q96FT9 RNU6-49P-201ENST00000384256 107 ntBASIC3.03□□□□□ -1.92
IFT43Q96FT9 RNU6-851P-201ENST00000384565 107 ntBASIC3.03□□□□□ -1.92
IFT43Q96FT9 SNORA26.2-201ENST00000390922 122 ntBASIC3.03□□□□□ -1.92
IFT43Q96FT9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.03□□□□□ -1.92
IFT43Q96FT9 RNU7-123P-201ENST00000515911 60 ntBASIC3.03□□□□□ -1.92
IFT43Q96FT9 RNU6-158P-201ENST00000517104 100 ntBASIC3.03□□□□□ -1.92
IFT43Q96FT9 AC107016.2-201ENST00000547968 190 ntBASIC3.03□□□□□ -1.92
IFT43Q96FT9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.03□□□□□ -1.92
IFT43Q96FT9 AC007318.2-201ENST00000620999 243 ntBASIC3.03□□□□□ -1.92
IFT43Q96FT9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
IFT43Q96FT9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
IFT43Q96FT9 AC108206.1-201ENST00000570186 4159 ntBASIC3.02□□□□□ -1.93
IFT43Q96FT9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
IFT43Q96FT9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
IFT43Q96FT9 AC073325.2-201ENST00000339545 159 ntBASIC3.02□□□□□ -1.93
IFT43Q96FT9 Y_RNA.344-201ENST00000365381 112 ntBASIC3.02□□□□□ -1.93
IFT43Q96FT9 SNORD38C-201ENST00000384381 69 ntBASIC3.02□□□□□ -1.93
IFT43Q96FT9 RNU6-163P-201ENST00000384396 106 ntBASIC3.02□□□□□ -1.93
IFT43Q96FT9 RNY4P29-201ENST00000410801 97 ntBASIC3.02□□□□□ -1.93
IFT43Q96FT9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.02□□□□□ -1.93
IFT43Q96FT9 AC069114.2-201ENST00000604699 304 ntBASIC3.02□□□□□ -1.93
IFT43Q96FT9 MIR6852-201ENST00000621699 66 ntBASIC3.02□□□□□ -1.93
IFT43Q96FT9 AC091932.4-201ENST00000623386 200 ntBASIC3.02□□□□□ -1.93
IFT43Q96FT9 AL596211.1-201ENST00000569873 2277 ntBASIC3.02□□□□□ -1.93
IFT43Q96FT9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.01□□□□□ -1.93
IFT43Q96FT9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.01□□□□□ -1.93
IFT43Q96FT9 RNU6-109P-201ENST00000516364 107 ntBASIC3.01□□□□□ -1.93
IFT43Q96FT9 RNU6-184P-201ENST00000516514 107 ntBASIC3.01□□□□□ -1.93
IFT43Q96FT9 AL137790.1-201ENST00000634283 177 ntBASIC3.01□□□□□ -1.93
IFT43Q96FT9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.01□□□□□ -1.93
IFT43Q96FT9 Y_RNA.220-201ENST00000364244 109 ntBASIC3□□□□□ -1.93
IFT43Q96FT9 RNU1-91P-201ENST00000364746 163 ntBASIC3□□□□□ -1.93
IFT43Q96FT9 RNU6-1104P-201ENST00000384723 104 ntBASIC3□□□□□ -1.93
IFT43Q96FT9 SNORD88.1-201ENST00000408684 91 ntBASIC3□□□□□ -1.93
IFT43Q96FT9 RPS3AP1-201ENST00000413190 320 ntBASIC3□□□□□ -1.93
IFT43Q96FT9 AC069257.2-201ENST00000441819 155 ntBASIC3□□□□□ -1.93
IFT43Q96FT9 RNU6-1116P-201ENST00000517269 99 ntBASIC3□□□□□ -1.93
IFT43Q96FT9 MIR3126-201ENST00000577443 74 ntBASIC3□□□□□ -1.93
IFT43Q96FT9 AC027279.3-201ENST00000625055 122 ntBASIC3□□□□□ -1.93
IFT43Q96FT9 AL162726.3-218ENST00000636401 95 ntBASIC3□□□□□ -1.93
IFT43Q96FT9 AC096644.4-201ENST00000563417 2912 ntBASIC3□□□□□ -1.93
IFT43Q96FT9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
IFT43Q96FT9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
IFT43Q96FT9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.99□□□□□ -1.93
IFT43Q96FT9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
IFT43Q96FT9 MIRLET7C-201ENST00000362160 84 ntBASIC2.99□□□□□ -1.93
IFT43Q96FT9 MIR1912-201ENST00000410389 80 ntBASIC2.99□□□□□ -1.93
IFT43Q96FT9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.99□□□□□ -1.93
IFT43Q96FT9 BX510359.4-201ENST00000423750 193 ntBASIC2.99□□□□□ -1.93
IFT43Q96FT9 MTATP8P2-201ENST00000435212 202 ntBASIC2.99□□□□□ -1.93
IFT43Q96FT9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.99□□□□□ -1.93
IFT43Q96FT9 RNU6-904P-201ENST00000516206 101 ntBASIC2.99□□□□□ -1.93
IFT43Q96FT9 SNORA31.10-201ENST00000516482 106 ntBASIC2.99□□□□□ -1.93
IFT43Q96FT9 AC141557.1-201ENST00000540982 400 ntBASIC2.99□□□□□ -1.93
IFT43Q96FT9 ELOCP29-201ENST00000588193 334 ntBASIC2.99□□□□□ -1.93
IFT43Q96FT9 AC078899.2-201ENST00000595282 212 ntBASIC2.99□□□□□ -1.93
IFT43Q96FT9 AL033523.1-201ENST00000605153 153 ntBASIC2.99□□□□□ -1.93
IFT43Q96FT9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
IFT43Q96FT9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.99□□□□□ -1.93
IFT43Q96FT9 SNORA9.2-201ENST00000365361 133 ntBASIC2.98□□□□□ -1.93
IFT43Q96FT9 MIR488-201ENST00000365739 83 ntBASIC2.98□□□□□ -1.93
IFT43Q96FT9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.98□□□□□ -1.93
IFT43Q96FT9 AL139132.1-201ENST00000431587 344 ntBASIC2.98□□□□□ -1.93
IFT43Q96FT9 UBE2DNL-203ENST00000474922 222 ntBASIC2.98□□□□□ -1.93
IFT43Q96FT9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.98□□□□□ -1.93
IFT43Q96FT9 AC022523.2-201ENST00000561045 150 ntBASIC2.98□□□□□ -1.93
IFT43Q96FT9 MIR5094-201ENST00000578766 85 ntBASIC2.98□□□□□ -1.93
IFT43Q96FT9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
IFT43Q96FT9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.97□□□□□ -1.93
IFT43Q96FT9 MIR302B-201ENST00000362188 73 ntBASIC2.97□□□□□ -1.93
IFT43Q96FT9 SNORA5B-201ENST00000363786 132 ntBASIC2.97□□□□□ -1.93
IFT43Q96FT9 RNU1-148P-201ENST00000384472 162 ntBASIC2.97□□□□□ -1.93
IFT43Q96FT9 RN7SKP200-201ENST00000410564 320 ntBASIC2.97□□□□□ -1.93
IFT43Q96FT9 SNORA19.1-201ENST00000410656 129 ntBASIC2.97□□□□□ -1.93
IFT43Q96FT9 AL035398.1-201ENST00000430869 322 ntBASIC2.97□□□□□ -1.93
IFT43Q96FT9 RPL39P25-201ENST00000449384 154 ntBASIC2.97□□□□□ -1.93
IFT43Q96FT9 RNU2-35P-201ENST00000516446 142 ntBASIC2.97□□□□□ -1.93
IFT43Q96FT9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
IFT43Q96FT9 AC002984.1-201ENST00000591692 448 ntBASIC2.97□□□□□ -1.93
IFT43Q96FT9 AL442128.1-201ENST00000615151 90 ntBASIC2.97□□□□□ -1.93
IFT43Q96FT9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
IFT43Q96FT9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
IFT43Q96FT9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.96□□□□□ -1.93
IFT43Q96FT9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
IFT43Q96FT9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
IFT43Q96FT9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.96□□□□□ -1.94
IFT43Q96FT9 Y_RNA.93-201ENST00000363066 109 ntBASIC2.96□□□□□ -1.94
IFT43Q96FT9 SNORA63D-201ENST00000364359 132 ntBASIC2.96□□□□□ -1.94
IFT43Q96FT9 Y_RNA.388-201ENST00000383919 113 ntBASIC2.96□□□□□ -1.94
IFT43Q96FT9 SNORA27-201ENST00000384323 126 ntBASIC2.96□□□□□ -1.94
IFT43Q96FT9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms