Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AL133547.1-201ENST00000448546 220 ntBASIC3.76□□□□□ -1.81
PTCD2Q8WV60 MIR4444-1-201ENST00000581696 74 ntBASIC3.76□□□□□ -1.81
PTCD2Q8WV60 MIR4444-2-201ENST00000584390 74 ntBASIC3.76□□□□□ -1.81
PTCD2Q8WV60 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCD2Q8WV60 AC012531.5-201ENST00000611375 151 ntBASIC3.76□□□□□ -1.81
PTCD2Q8WV60 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.76□□□□□ -1.81
PTCD2Q8WV60 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTCD2Q8WV60 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTCD2Q8WV60 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PTCD2Q8WV60 RNU4-32P-201ENST00000363404 141 ntBASIC3.75□□□□□ -1.81
PTCD2Q8WV60 MIR200C-201ENST00000384980 68 ntBASIC3.75□□□□□ -1.81
PTCD2Q8WV60 MIR670-201ENST00000390142 98 ntBASIC3.75□□□□□ -1.81
PTCD2Q8WV60 RNU6-1321P-201ENST00000390905 107 ntBASIC3.75□□□□□ -1.81
PTCD2Q8WV60 SNORA57.3-201ENST00000411095 141 ntBASIC3.75□□□□□ -1.81
PTCD2Q8WV60 RNU7-79P-201ENST00000516082 62 ntBASIC3.75□□□□□ -1.81
PTCD2Q8WV60 RNU6-523P-201ENST00000516304 54 ntBASIC3.75□□□□□ -1.81
PTCD2Q8WV60 MIR3169-201ENST00000578032 83 ntBASIC3.75□□□□□ -1.81
PTCD2Q8WV60 MIR548AR-201ENST00000582191 57 ntBASIC3.75□□□□□ -1.81
PTCD2Q8WV60 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTCD2Q8WV60 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTCD2Q8WV60 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTCD2Q8WV60 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.74□□□□□ -1.81
PTCD2Q8WV60 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCD2Q8WV60 SNORA71.3-201ENST00000362582 128 ntBASIC3.74□□□□□ -1.81
PTCD2Q8WV60 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.74□□□□□ -1.81
PTCD2Q8WV60 RNU6-950P-201ENST00000384651 107 ntBASIC3.74□□□□□ -1.81
PTCD2Q8WV60 RNU1-101P-201ENST00000391171 127 ntBASIC3.74□□□□□ -1.81
PTCD2Q8WV60 SNORA11.1-201ENST00000408133 129 ntBASIC3.74□□□□□ -1.81
PTCD2Q8WV60 RNU6-602P-201ENST00000411155 105 ntBASIC3.74□□□□□ -1.81
PTCD2Q8WV60 AC006989.1-201ENST00000427212 131 ntBASIC3.74□□□□□ -1.81
PTCD2Q8WV60 RNU7-48P-201ENST00000458875 63 ntBASIC3.74□□□□□ -1.81
PTCD2Q8WV60 RNU1-95P-201ENST00000516357 160 ntBASIC3.74□□□□□ -1.81
PTCD2Q8WV60 RNU1-128P-201ENST00000516704 160 ntBASIC3.74□□□□□ -1.81
PTCD2Q8WV60 FAM106DP-201ENST00000586416 501 ntBASIC3.74□□□□□ -1.81
PTCD2Q8WV60 AC020891.4-201ENST00000605745 93 ntBASIC3.74□□□□□ -1.81
PTCD2Q8WV60 AP000553.6-201ENST00000641242 118 ntBASIC3.74□□□□□ -1.81
PTCD2Q8WV60 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PTCD2Q8WV60 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTCD2Q8WV60 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.74□□□□□ -1.81
PTCD2Q8WV60 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCD2Q8WV60 SNORD114-10-201ENST00000363409 72 ntBASIC3.73□□□□□ -1.81
PTCD2Q8WV60 RNU6-1019P-201ENST00000364424 107 ntBASIC3.73□□□□□ -1.81
PTCD2Q8WV60 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCD2Q8WV60 AC006483.1-201ENST00000487308 313 ntBASIC3.73□□□□□ -1.81
PTCD2Q8WV60 AC110768.1-201ENST00000509222 400 ntBASIC3.73□□□□□ -1.81
PTCD2Q8WV60 RNU6-871P-201ENST00000516122 100 ntBASIC3.73□□□□□ -1.81
PTCD2Q8WV60 MIR5187-201ENST00000583479 76 ntBASIC3.73□□□□□ -1.81
PTCD2Q8WV60 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCD2Q8WV60 AC069114.2-201ENST00000604699 304 ntBASIC3.73□□□□□ -1.81
PTCD2Q8WV60 Y_RNA.788-201ENST00000622394 112 ntBASIC3.73□□□□□ -1.81
PTCD2Q8WV60 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCD2Q8WV60 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCD2Q8WV60 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PTCD2Q8WV60 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTCD2Q8WV60 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTCD2Q8WV60 RNA5SP51-201ENST00000364750 119 ntBASIC3.72□□□□□ -1.81
PTCD2Q8WV60 RNU6-283P-201ENST00000364788 107 ntBASIC3.72□□□□□ -1.81
PTCD2Q8WV60 Y_RNA.340-201ENST00000365330 92 ntBASIC3.72□□□□□ -1.81
PTCD2Q8WV60 SNORA40.18-201ENST00000391200 128 ntBASIC3.72□□□□□ -1.81
PTCD2Q8WV60 AC003685.2-201ENST00000422795 395 ntBASIC3.72□□□□□ -1.81
PTCD2Q8WV60 ARF4P2-201ENST00000430209 526 ntBASIC3.72□□□□□ -1.81
PTCD2Q8WV60 snoU13.11-201ENST00000459219 104 ntBASIC3.72□□□□□ -1.81
PTCD2Q8WV60 SNORD123-201ENST00000459473 70 ntBASIC3.72□□□□□ -1.81
PTCD2Q8WV60 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.72□□□□□ -1.81
PTCD2Q8WV60 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTCD2Q8WV60 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PTCD2Q8WV60 SNORA5A-201ENST00000384111 134 ntBASIC3.71□□□□□ -1.82
PTCD2Q8WV60 SNORA2B-201ENST00000384583 137 ntBASIC3.71□□□□□ -1.82
PTCD2Q8WV60 SNORD28B-201ENST00000390993 75 ntBASIC3.71□□□□□ -1.82
PTCD2Q8WV60 HSPE1P9-201ENST00000440046 311 ntBASIC3.71□□□□□ -1.82
PTCD2Q8WV60 snoU13.16-201ENST00000459350 104 ntBASIC3.71□□□□□ -1.82
PTCD2Q8WV60 RNU6-579P-201ENST00000516879 102 ntBASIC3.71□□□□□ -1.82
PTCD2Q8WV60 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PTCD2Q8WV60 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTCD2Q8WV60 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.7□□□□□ -1.82
PTCD2Q8WV60 RNU6-624P-201ENST00000363411 107 ntBASIC3.7□□□□□ -1.82
PTCD2Q8WV60 RNU6-525P-201ENST00000363685 104 ntBASIC3.7□□□□□ -1.82
PTCD2Q8WV60 RNU6-411P-201ENST00000384451 107 ntBASIC3.7□□□□□ -1.82
PTCD2Q8WV60 Y_RNA.537-201ENST00000384626 109 ntBASIC3.7□□□□□ -1.82
PTCD2Q8WV60 RNU6-220P-201ENST00000390919 107 ntBASIC3.7□□□□□ -1.82
PTCD2Q8WV60 AC093578.1-201ENST00000415219 368 ntBASIC3.7□□□□□ -1.82
PTCD2Q8WV60 AL035423.1-201ENST00000420331 213 ntBASIC3.7□□□□□ -1.82
PTCD2Q8WV60 AC087499.7-201ENST00000441958 109 ntBASIC3.7□□□□□ -1.82
PTCD2Q8WV60 AC093850.1-201ENST00000454121 251 ntBASIC3.7□□□□□ -1.82
PTCD2Q8WV60 RNU7-137P-201ENST00000516788 62 ntBASIC3.7□□□□□ -1.82
PTCD2Q8WV60 MIR5195-201ENST00000583555 115 ntBASIC3.7□□□□□ -1.82
PTCD2Q8WV60 MIR3922-201ENST00000585192 84 ntBASIC3.7□□□□□ -1.82
PTCD2Q8WV60 AP001362.1-201ENST00000625165 124 ntBASIC3.7□□□□□ -1.82
PTCD2Q8WV60 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PTCD2Q8WV60 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.7□□□□□ -1.82
PTCD2Q8WV60 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTCD2Q8WV60 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.69□□□□□ -1.82
PTCD2Q8WV60 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PTCD2Q8WV60 RPL23AP83-201ENST00000434984 473 ntBASIC3.69□□□□□ -1.82
PTCD2Q8WV60 CST9LP2-201ENST00000437612 320 ntBASIC3.69□□□□□ -1.82
PTCD2Q8WV60 AC008011.1-201ENST00000545989 227 ntBASIC3.69□□□□□ -1.82
PTCD2Q8WV60 AC005786.1-201ENST00000588553 154 ntBASIC3.69□□□□□ -1.82
PTCD2Q8WV60 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTCD2Q8WV60 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTCD2Q8WV60 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 341.9 ms