Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 Y_RNA.563-201ENST00000384707 108 ntBASIC2.39□□□□□ -2.03
SYNE4Q8N205 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SYNE4Q8N205 AP1B1P2-201ENST00000416196 106 ntBASIC2.39□□□□□ -2.03
SYNE4Q8N205 AL357134.1-201ENST00000445848 426 ntBASIC2.39□□□□□ -2.03
SYNE4Q8N205 RNU6-772P-201ENST00000516042 105 ntBASIC2.39□□□□□ -2.03
SYNE4Q8N205 RNU6-1299P-201ENST00000516316 100 ntBASIC2.39□□□□□ -2.03
SYNE4Q8N205 AC073413.2-201ENST00000604332 360 ntBASIC2.39□□□□□ -2.03
SYNE4Q8N205 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.39□□□□□ -2.03
SYNE4Q8N205 MTND5P32-201ENST00000560711 1802 ntBASIC2.39□□□□□ -2.03
SYNE4Q8N205 Y_RNA.486-201ENST00000384398 107 ntBASIC2.38□□□□□ -2.03
SYNE4Q8N205 RNA5SP467-201ENST00000391274 118 ntBASIC2.38□□□□□ -2.03
SYNE4Q8N205 SRIP3-201ENST00000413200 219 ntBASIC2.38□□□□□ -2.03
SYNE4Q8N205 RNU2-34P-201ENST00000516534 121 ntBASIC2.38□□□□□ -2.03
SYNE4Q8N205 RNU7-149P-201ENST00000516739 59 ntBASIC2.38□□□□□ -2.03
SYNE4Q8N205 RNU6-1096P-201ENST00000517089 102 ntBASIC2.38□□□□□ -2.03
SYNE4Q8N205 AC090142.3-201ENST00000519012 385 ntBASIC2.38□□□□□ -2.03
SYNE4Q8N205 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.38□□□□□ -2.03
SYNE4Q8N205 AC007751.1-201ENST00000529260 376 ntBASIC2.38□□□□□ -2.03
SYNE4Q8N205 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.38□□□□□ -2.03
SYNE4Q8N205 AC097639.2-201ENST00000603159 172 ntBASIC2.38□□□□□ -2.03
SYNE4Q8N205 U6.108-201ENST00000637764 58 ntBASIC2.38□□□□□ -2.03
SYNE4Q8N205 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SYNE4Q8N205 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SYNE4Q8N205 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SYNE4Q8N205 Y_RNA.66-201ENST00000362862 102 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 Y_RNA.224-201ENST00000364308 111 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 SNORA67.1-201ENST00000364749 141 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 RNY4P18-201ENST00000391107 89 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 SNORA79-201ENST00000408376 140 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 RNU6-1186P-201ENST00000410429 97 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 AC245047.4-201ENST00000433189 144 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 AL021397.1-201ENST00000451806 248 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 SNORA25.15-201ENST00000516487 89 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 RNU6-1291P-201ENST00000516591 104 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 Y_RNA.712-201ENST00000517011 92 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 RNU1-104P-201ENST00000517280 175 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 CYCSP26-201ENST00000534107 320 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 MIR3683-201ENST00000580847 82 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 AC091178.2-201ENST00000584401 117 ntBASIC2.37□□□□□ -2.03
SYNE4Q8N205 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SYNE4Q8N205 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.37□□□□□ -2.03
SYNE4Q8N205 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SYNE4Q8N205 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SYNE4Q8N205 ZNF271P-202ENST00000465539 1970 ntBASIC2.36□□□□□ -2.03
SYNE4Q8N205 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.36□□□□□ -2.03
SYNE4Q8N205 AC009487.4-201ENST00000624969 3585 ntBASIC2.36□□□□□ -2.03
SYNE4Q8N205 MIRLET7G-201ENST00000362280 84 ntBASIC2.36□□□□□ -2.03
SYNE4Q8N205 SNORD114-6-201ENST00000364393 72 ntBASIC2.36□□□□□ -2.03
SYNE4Q8N205 RNU6-1164P-201ENST00000364428 107 ntBASIC2.36□□□□□ -2.03
SYNE4Q8N205 RNU6-309P-201ENST00000364573 106 ntBASIC2.36□□□□□ -2.03
SYNE4Q8N205 RNU2-70P-201ENST00000410718 179 ntBASIC2.36□□□□□ -2.03
SYNE4Q8N205 RNU2-55P-201ENST00000411146 174 ntBASIC2.36□□□□□ -2.03
SYNE4Q8N205 AC010154.1-201ENST00000425857 269 ntBASIC2.36□□□□□ -2.03
SYNE4Q8N205 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.36□□□□□ -2.03
SYNE4Q8N205 RNU6-1041P-201ENST00000516254 102 ntBASIC2.36□□□□□ -2.03
SYNE4Q8N205 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.36□□□□□ -2.03
SYNE4Q8N205 AL160236.1-201ENST00000556317 195 ntBASIC2.36□□□□□ -2.03
SYNE4Q8N205 MIR203B-201ENST00000636080 86 ntBASIC2.36□□□□□ -2.03
SYNE4Q8N205 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
SYNE4Q8N205 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
SYNE4Q8N205 Y_RNA.99-201ENST00000363138 105 ntBASIC2.35□□□□□ -2.03
SYNE4Q8N205 Y_RNA.114-201ENST00000363265 113 ntBASIC2.35□□□□□ -2.03
SYNE4Q8N205 RNU1-96P-201ENST00000364163 162 ntBASIC2.35□□□□□ -2.03
SYNE4Q8N205 SNORA1-201ENST00000384107 130 ntBASIC2.35□□□□□ -2.03
SYNE4Q8N205 SNORA12.1-201ENST00000390873 148 ntBASIC2.35□□□□□ -2.03
SYNE4Q8N205 SNORD72-201ENST00000390994 80 ntBASIC2.35□□□□□ -2.03
SYNE4Q8N205 AC011406.1-201ENST00000512440 370 ntBASIC2.35□□□□□ -2.03
SYNE4Q8N205 SNORD33.1-201ENST00000516213 88 ntBASIC2.35□□□□□ -2.03
SYNE4Q8N205 RNA5SP82-201ENST00000516707 92 ntBASIC2.35□□□□□ -2.03
SYNE4Q8N205 MIR3121-201ENST00000579680 77 ntBASIC2.35□□□□□ -2.03
SYNE4Q8N205 BX248123.2-201ENST00000606318 124 ntBASIC2.35□□□□□ -2.03
SYNE4Q8N205 Pinc.1-201ENST00000616452 154 ntBASIC2.35□□□□□ -2.03
SYNE4Q8N205 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.35□□□□□ -2.03
SYNE4Q8N205 MIR3914-2-201ENST00000637339 95 ntBASIC2.35□□□□□ -2.03
SYNE4Q8N205 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SYNE4Q8N205 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SYNE4Q8N205 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SYNE4Q8N205 Y_RNA.52-201ENST00000362760 96 ntBASIC2.34□□□□□ -2.03
SYNE4Q8N205 snoU2-30.2-201ENST00000362805 70 ntBASIC2.34□□□□□ -2.03
SYNE4Q8N205 SNORA38-201ENST00000363946 132 ntBASIC2.34□□□□□ -2.03
SYNE4Q8N205 RNU6-476P-201ENST00000384726 107 ntBASIC2.34□□□□□ -2.03
SYNE4Q8N205 RNU6-1064P-201ENST00000410626 104 ntBASIC2.34□□□□□ -2.03
SYNE4Q8N205 AL158147.1-201ENST00000443970 75 ntBASIC2.34□□□□□ -2.03
SYNE4Q8N205 MRPS17P9-201ENST00000511924 393 ntBASIC2.34□□□□□ -2.03
SYNE4Q8N205 RNU6-781P-201ENST00000516377 101 ntBASIC2.34□□□□□ -2.03
SYNE4Q8N205 RNA5SP153-201ENST00000516498 76 ntBASIC2.34□□□□□ -2.03
SYNE4Q8N205 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.34□□□□□ -2.03
SYNE4Q8N205 AC090049.2-201ENST00000550377 109 ntBASIC2.34□□□□□ -2.03
SYNE4Q8N205 AC108081.1-201ENST00000604358 221 ntBASIC2.34□□□□□ -2.03
SYNE4Q8N205 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SYNE4Q8N205 Y_RNA.253-201ENST00000364562 112 ntBASIC2.33□□□□□ -2.04
SYNE4Q8N205 RNU6-1056P-201ENST00000383996 107 ntBASIC2.33□□□□□ -2.04
SYNE4Q8N205 RNU6-1144P-201ENST00000384247 104 ntBASIC2.33□□□□□ -2.04
SYNE4Q8N205 AL627390.1-201ENST00000396055 340 ntBASIC2.33□□□□□ -2.04
SYNE4Q8N205 AL117342.1-201ENST00000404861 406 ntBASIC2.33□□□□□ -2.04
SYNE4Q8N205 MIR1253-201ENST00000408273 105 ntBASIC2.33□□□□□ -2.04
SYNE4Q8N205 Y_RNA.621-201ENST00000411065 96 ntBASIC2.33□□□□□ -2.04
SYNE4Q8N205 EDDM3CP-201ENST00000415977 425 ntBASIC2.33□□□□□ -2.04
SYNE4Q8N205 Y_RNA.651-201ENST00000459380 103 ntBASIC2.33□□□□□ -2.04
SYNE4Q8N205 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms