Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNU6-1113P-201ENST00000384348 107 ntBASIC2.57□□□□□ -2
YBX1P67809 AC003685.2-201ENST00000422795 395 ntBASIC2.57□□□□□ -2
YBX1P67809 AC104389.3-201ENST00000445629 235 ntBASIC2.57□□□□□ -2
YBX1P67809 AL109933.2-201ENST00000452651 260 ntBASIC2.57□□□□□ -2
YBX1P67809 snoU13.26-201ENST00000459452 105 ntBASIC2.57□□□□□ -2
YBX1P67809 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.57□□□□□ -2
YBX1P67809 RNY4P20-201ENST00000516678 93 ntBASIC2.57□□□□□ -2
YBX1P67809 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.57□□□□□ -2
YBX1P67809 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
YBX1P67809 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.57□□□□□ -2
YBX1P67809 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.57□□□□□ -2
YBX1P67809 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
YBX1P67809 Y_RNA.37-201ENST00000362606 108 ntBASIC2.56□□□□□ -2
YBX1P67809 RNU6-640P-201ENST00000363693 105 ntBASIC2.56□□□□□ -2
YBX1P67809 SNORD115-28-201ENST00000363931 81 ntBASIC2.56□□□□□ -2
YBX1P67809 snoU2-30.1-201ENST00000365012 70 ntBASIC2.56□□□□□ -2
YBX1P67809 SNORA51.10-201ENST00000384418 136 ntBASIC2.56□□□□□ -2
YBX1P67809 MIR515-2-201ENST00000384883 83 ntBASIC2.56□□□□□ -2
YBX1P67809 MIR515-1-201ENST00000384884 83 ntBASIC2.56□□□□□ -2
YBX1P67809 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.56□□□□□ -2
YBX1P67809 SNORA26.7-201ENST00000391288 122 ntBASIC2.56□□□□□ -2
YBX1P67809 MIR887-201ENST00000401258 79 ntBASIC2.56□□□□□ -2
YBX1P67809 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.56□□□□□ -2
YBX1P67809 RN7SL636P-201ENST00000497504 294 ntBASIC2.56□□□□□ -2
YBX1P67809 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.56□□□□□ -2
YBX1P67809 RNU1-41P-201ENST00000516161 162 ntBASIC2.56□□□□□ -2
YBX1P67809 RNU1-48P-201ENST00000516400 162 ntBASIC2.56□□□□□ -2
YBX1P67809 MIR4635-201ENST00000583759 79 ntBASIC2.56□□□□□ -2
YBX1P67809 AC021443.1-201ENST00000604478 211 ntBASIC2.56□□□□□ -2
YBX1P67809 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.56□□□□□ -2
YBX1P67809 AC006441.5-201ENST00000612680 209 ntBASIC2.56□□□□□ -2
YBX1P67809 AL590808.1-201ENST00000618696 141 ntBASIC2.56□□□□□ -2
YBX1P67809 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.56□□□□□ -2
YBX1P67809 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.55□□□□□ -2
YBX1P67809 RNU6-862P-201ENST00000362804 105 ntBASIC2.55□□□□□ -2
YBX1P67809 Y_RNA.99-201ENST00000363138 105 ntBASIC2.55□□□□□ -2
YBX1P67809 RNU6-268P-201ENST00000364174 107 ntBASIC2.55□□□□□ -2
YBX1P67809 SNORD73B-201ENST00000364394 72 ntBASIC2.55□□□□□ -2
YBX1P67809 RNU6-1131P-201ENST00000364955 107 ntBASIC2.55□□□□□ -2
YBX1P67809 RNU6-294P-201ENST00000364999 102 ntBASIC2.55□□□□□ -2
YBX1P67809 Y_RNA.323-201ENST00000365157 109 ntBASIC2.55□□□□□ -2
YBX1P67809 Y_RNA.362-201ENST00000365518 110 ntBASIC2.55□□□□□ -2
YBX1P67809 RNU6-160P-201ENST00000384591 107 ntBASIC2.55□□□□□ -2
YBX1P67809 Y_RNA.547-201ENST00000384654 119 ntBASIC2.55□□□□□ -2
YBX1P67809 RNU6-1072P-201ENST00000384703 107 ntBASIC2.55□□□□□ -2
YBX1P67809 RNU6-443P-201ENST00000384780 107 ntBASIC2.55□□□□□ -2
YBX1P67809 RNA5SP210-201ENST00000391034 120 ntBASIC2.55□□□□□ -2
YBX1P67809 U8.17-201ENST00000391292 132 ntBASIC2.55□□□□□ -2
YBX1P67809 MIR1302-4-201ENST00000408701 150 ntBASIC2.55□□□□□ -2
YBX1P67809 AL445646.1-201ENST00000431784 216 ntBASIC2.55□□□□□ -2
YBX1P67809 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
YBX1P67809 RNU1-131P-201ENST00000458943 161 ntBASIC2.55□□□□□ -2
YBX1P67809 AC024995.1-201ENST00000523014 93 ntBASIC2.55□□□□□ -2
YBX1P67809 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.55□□□□□ -2
YBX1P67809 ZNF720P1-201ENST00000562403 1939 ntBASIC2.55□□□□□ -2
YBX1P67809 RNU6-94P-201ENST00000607728 107 ntBASIC2.55□□□□□ -2
YBX1P67809 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.55□□□□□ -2
YBX1P67809 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.54□□□□□ -2
YBX1P67809 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
YBX1P67809 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.54□□□□□ -2
YBX1P67809 RNU6-349P-201ENST00000362402 107 ntBASIC2.54□□□□□ -2
YBX1P67809 U8.6-201ENST00000364939 135 ntBASIC2.54□□□□□ -2
YBX1P67809 U8.9-201ENST00000365667 134 ntBASIC2.54□□□□□ -2
YBX1P67809 MIR9-1-201ENST00000385198 89 ntBASIC2.54□□□□□ -2
YBX1P67809 CST2P1-201ENST00000425770 87 ntBASIC2.54□□□□□ -2
YBX1P67809 SNORA40.13-201ENST00000516379 120 ntBASIC2.54□□□□□ -2
YBX1P67809 Y_RNA.676-201ENST00000516393 96 ntBASIC2.54□□□□□ -2
YBX1P67809 SNORD45.4-201ENST00000516629 73 ntBASIC2.54□□□□□ -2
YBX1P67809 SNORD36C-201ENST00000516733 66 ntBASIC2.54□□□□□ -2
YBX1P67809 SUMO2P16-201ENST00000519475 264 ntBASIC2.54□□□□□ -2
YBX1P67809 IGKV3-31-201ENST00000523109 329 ntBASIC2.54□□□□□ -2
YBX1P67809 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.54□□□□□ -2
YBX1P67809 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.54□□□□□ -2
YBX1P67809 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.54□□□□□ -2
YBX1P67809 CTSLP2-204ENST00000629029 392 ntBASIC2.54□□□□□ -2
YBX1P67809 Z82195.2-201ENST00000612348 18351 ntBASIC2.54□□□□□ -2
YBX1P67809 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
YBX1P67809 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
YBX1P67809 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
YBX1P67809 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.53□□□□□ -2
YBX1P67809 RNU1-133P-201ENST00000364867 167 ntBASIC2.53□□□□□ -2
YBX1P67809 RNU6-970P-201ENST00000516312 107 ntBASIC2.53□□□□□ -2
YBX1P67809 RNU6-830P-201ENST00000516353 107 ntBASIC2.53□□□□□ -2
YBX1P67809 SNORA18.7-201ENST00000516910 131 ntBASIC2.53□□□□□ -2
YBX1P67809 MIR4762-201ENST00000585261 75 ntBASIC2.53□□□□□ -2
YBX1P67809 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.53□□□□□ -2
YBX1P67809 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.52□□□□□ -2.01
YBX1P67809 U8.5-201ENST00000364528 136 ntBASIC2.52□□□□□ -2.01
YBX1P67809 Y_RNA.265-201ENST00000364677 108 ntBASIC2.52□□□□□ -2.01
YBX1P67809 RNY1P6-201ENST00000384193 109 ntBASIC2.52□□□□□ -2.01
YBX1P67809 Y_RNA.544-201ENST00000384650 113 ntBASIC2.52□□□□□ -2.01
YBX1P67809 RNU6-440P-201ENST00000390882 105 ntBASIC2.52□□□□□ -2.01
YBX1P67809 MIR1262-201ENST00000408276 93 ntBASIC2.52□□□□□ -2.01
YBX1P67809 RNU7-164P-201ENST00000459221 62 ntBASIC2.52□□□□□ -2.01
YBX1P67809 AC015726.2-201ENST00000620112 122 ntBASIC2.52□□□□□ -2.01
YBX1P67809 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.52□□□□□ -2.01
YBX1P67809 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
YBX1P67809 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.51□□□□□ -2.01
YBX1P67809 RNU6-859P-201ENST00000362728 107 ntBASIC2.51□□□□□ -2.01
YBX1P67809 RNA5SP493-201ENST00000364115 91 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms