Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 AC069257.2-201ENST00000441819 155 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.07□□□□□ -2.08
NPTX2P47972 RNA5SP182-201ENST00000516064 82 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 RNU6-406P-201ENST00000516470 107 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 SNORA31.10-201ENST00000516482 106 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 AL160236.1-201ENST00000556317 195 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.07□□□□□ -2.08
NPTX2P47972 SUB1P4-201ENST00000566062 339 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 MIR3910-1-201ENST00000580936 111 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 AC097639.2-201ENST00000603159 172 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 Pinc.1-201ENST00000616452 154 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
NPTX2P47972 SNORD68-201ENST00000363214 84 ntBASIC2.06□□□□□ -2.08
NPTX2P47972 Y_RNA.215-201ENST00000364204 112 ntBASIC2.06□□□□□ -2.08
NPTX2P47972 Y_RNA.634-201ENST00000364811 113 ntBASIC2.06□□□□□ -2.08
NPTX2P47972 RNU4-11P-201ENST00000365287 132 ntBASIC2.06□□□□□ -2.08
NPTX2P47972 MIR613-201ENST00000385248 95 ntBASIC2.06□□□□□ -2.08
NPTX2P47972 RNU6-440P-201ENST00000390882 105 ntBASIC2.06□□□□□ -2.08
NPTX2P47972 RNU6-131P-201ENST00000391144 107 ntBASIC2.06□□□□□ -2.08
NPTX2P47972 AL445685.2-201ENST00000422551 342 ntBASIC2.06□□□□□ -2.08
NPTX2P47972 FTH1P12-201ENST00000432137 551 ntBASIC2.06□□□□□ -2.08
NPTX2P47972 HSPE1P9-201ENST00000440046 311 ntBASIC2.06□□□□□ -2.08
NPTX2P47972 RNA5SP153-201ENST00000516498 76 ntBASIC2.06□□□□□ -2.08
NPTX2P47972 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.06□□□□□ -2.08
NPTX2P47972 MIR378D2-201ENST00000580636 98 ntBASIC2.06□□□□□ -2.08
NPTX2P47972 AC008507.4-201ENST00000585464 127 ntBASIC2.06□□□□□ -2.08
NPTX2P47972 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.06□□□□□ -2.08
NPTX2P47972 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NPTX2P47972 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NPTX2P47972 U8.5-201ENST00000364528 136 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 Y_RNA.265-201ENST00000364677 108 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 Y_RNA.393-201ENST00000383936 102 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 Y_RNA.486-201ENST00000384398 107 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 Y_RNA.488-201ENST00000384403 102 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 Y_RNA.521-201ENST00000384560 114 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NPTX2P47972 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NPTX2P47972 SNORD72-201ENST00000390994 80 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 SNORA40.18-201ENST00000391200 128 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 RNA5SP482-201ENST00000391269 118 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 RNU2-70P-201ENST00000410718 179 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 RNA5SP100-201ENST00000410903 110 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 RNA5SP59-201ENST00000410922 110 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.05□□□□□ -2.08
NPTX2P47972 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.05□□□□□ -2.08
NPTX2P47972 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 MIR4662B-201ENST00000579498 81 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 MIR4762-201ENST00000585261 75 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.05□□□□□ -2.08
NPTX2P47972 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
NPTX2P47972 RNU6-704P-201ENST00000364162 103 ntBASIC2.04□□□□□ -2.08
NPTX2P47972 RNU6-978P-201ENST00000364371 103 ntBASIC2.04□□□□□ -2.08
NPTX2P47972 SNORA4.2-201ENST00000365313 147 ntBASIC2.04□□□□□ -2.08
NPTX2P47972 SNORD50.2-201ENST00000365465 70 ntBASIC2.04□□□□□ -2.08
NPTX2P47972 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
NPTX2P47972 MIR583-201ENST00000384846 75 ntBASIC2.04□□□□□ -2.08
NPTX2P47972 RNU2-40P-201ENST00000410833 196 ntBASIC2.04□□□□□ -2.08
NPTX2P47972 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.04□□□□□ -2.08
NPTX2P47972 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.04□□□□□ -2.08
NPTX2P47972 STAG3L5P-204ENST00000443759 179 ntBASIC2.04□□□□□ -2.08
NPTX2P47972 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.04□□□□□ -2.08
NPTX2P47972 RNU7-28P-201ENST00000516759 62 ntBASIC2.04□□□□□ -2.08
NPTX2P47972 RNA5SP364-201ENST00000516938 78 ntBASIC2.04□□□□□ -2.08
NPTX2P47972 RNU6-789P-201ENST00000517105 102 ntBASIC2.04□□□□□ -2.08
NPTX2P47972 RNA5SP437-201ENST00000517249 129 ntBASIC2.04□□□□□ -2.08
NPTX2P47972 AC087685.1-201ENST00000587507 141 ntBASIC2.04□□□□□ -2.08
NPTX2P47972 AC120024.3-201ENST00000603167 156 ntBASIC2.04□□□□□ -2.08
NPTX2P47972 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.04□□□□□ -2.08
NPTX2P47972 MIR6845-201ENST00000613182 61 ntBASIC2.04□□□□□ -2.08
NPTX2P47972 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.04□□□□□ -2.08
NPTX2P47972 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NPTX2P47972 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NPTX2P47972 RNU6-112P-201ENST00000363599 104 ntBASIC2.03□□□□□ -2.08
NPTX2P47972 RNU6-597P-201ENST00000365620 102 ntBASIC2.03□□□□□ -2.08
NPTX2P47972 RNU6-296P-201ENST00000384608 107 ntBASIC2.03□□□□□ -2.08
NPTX2P47972 MIR9-3-201ENST00000385084 90 ntBASIC2.03□□□□□ -2.08
NPTX2P47972 MIR569-201ENST00000385228 96 ntBASIC2.03□□□□□ -2.08
NPTX2P47972 RPS29P11-201ENST00000496507 171 ntBASIC2.03□□□□□ -2.08
NPTX2P47972 RNU6-126P-201ENST00000516685 103 ntBASIC2.03□□□□□ -2.08
NPTX2P47972 RNU6-295P-201ENST00000516901 104 ntBASIC2.03□□□□□ -2.08
NPTX2P47972 Y_RNA.714-201ENST00000517065 90 ntBASIC2.03□□□□□ -2.08
NPTX2P47972 MIR3646-201ENST00000578301 84 ntBASIC2.03□□□□□ -2.08
NPTX2P47972 MIR548X2-201ENST00000579776 100 ntBASIC2.03□□□□□ -2.08
NPTX2P47972 uc_338.20-201ENST00000621563 178 ntBASIC2.03□□□□□ -2.08
NPTX2P47972 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.03□□□□□ -2.08
NPTX2P47972 Y_RNA.66-201ENST00000362862 102 ntBASIC2.02□□□□□ -2.09
NPTX2P47972 SNORD50B-201ENST00000364995 70 ntBASIC2.02□□□□□ -2.09
NPTX2P47972 Y_RNA.343-201ENST00000365354 112 ntBASIC2.02□□□□□ -2.09
NPTX2P47972 MIR520A-201ENST00000384862 85 ntBASIC2.02□□□□□ -2.09
NPTX2P47972 SNORD37.2-201ENST00000391075 66 ntBASIC2.02□□□□□ -2.09
NPTX2P47972 SNORA26-201ENST00000391286 122 ntBASIC2.02□□□□□ -2.09
NPTX2P47972 TMSB4XP3-201ENST00000445144 114 ntBASIC2.02□□□□□ -2.09
NPTX2P47972 RNU6-426P-201ENST00000516464 97 ntBASIC2.02□□□□□ -2.09
NPTX2P47972 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.02□□□□□ -2.09
NPTX2P47972 MIR6844-201ENST00000637122 62 ntBASIC2.02□□□□□ -2.09
NPTX2P47972 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
NPTX2P47972 RNU6-199P-201ENST00000362954 107 ntBASIC2.01□□□□□ -2.09
NPTX2P47972 Y_RNA.568-201ENST00000384742 113 ntBASIC2.01□□□□□ -2.09
NPTX2P47972 CYCSP49-201ENST00000420810 319 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms