Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU6-1235P-201ENST00000384559 107 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 MIR586-201ENST00000385035 97 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 RNU6-1248P-201ENST00000391096 64 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 SNORA26.5-201ENST00000391215 123 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 RNU1-78P-201ENST00000391248 165 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 RNU2-7P-201ENST00000410794 178 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 AC060773.1-201ENST00000421698 310 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 AL135790.2-201ENST00000437701 267 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 AC016717.1-201ENST00000448918 286 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 RNU6-498P-201ENST00000459468 107 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 AC011406.1-201ENST00000512440 370 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 RNU6-344P-201ENST00000516635 111 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 DNAJC19P9-201ENST00000555084 351 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 MIR4431-201ENST00000579990 94 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 AC069114.2-201ENST00000604699 304 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 MIR502-201ENST00000606349 86 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.77□□□□□ -2.13
HOXC13P31276 AC008873.1-201ENST00000625051 138 ntBASIC1.77□□□□□ -2.13
HOXC13P31276 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HOXC13P31276 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HOXC13P31276 RNU6-1019P-201ENST00000364424 107 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 SNORD87-201ENST00000364849 89 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 SNORD116-14-201ENST00000383894 92 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 SNORD116-17-201ENST00000383929 92 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 RNU6-245P-201ENST00000384020 107 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 Y_RNA.420-201ENST00000384043 110 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 RNU6-80P-201ENST00000384195 107 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 SNORD116-15-201ENST00000384445 92 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 SNORD116-19-201ENST00000384729 92 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 MIR520A-201ENST00000384862 85 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 SNORA67.5-201ENST00000391036 107 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 SNORD37.2-201ENST00000391075 66 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 AC004866.1-201ENST00000411748 78 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 AC006461.1-201ENST00000412637 326 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 AC099677.2-201ENST00000436385 175 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 AC245047.8-201ENST00000456455 284 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 RNU7-57P-201ENST00000459540 60 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.76□□□□□ -2.13
HOXC13P31276 AC107027.2-201ENST00000512197 115 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 SCARNA8-201ENST00000515924 131 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 RNU6-1007P-201ENST00000516586 107 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 DNAJC19P2-201ENST00000593340 302 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 AC013791.1-201ENST00000616619 62 ntBASIC1.76□□□□□ -2.13
HOXC13P31276 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HOXC13P31276 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HOXC13P31276 RNU1-62P-201ENST00000362599 164 ntBASIC1.75□□□□□ -2.13
HOXC13P31276 SNORA63.4-201ENST00000362763 126 ntBASIC1.75□□□□□ -2.13
HOXC13P31276 MIR626-201ENST00000385032 94 ntBASIC1.75□□□□□ -2.13
HOXC13P31276 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.75□□□□□ -2.13
HOXC13P31276 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.75□□□□□ -2.13
HOXC13P31276 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
HOXC13P31276 AC069257.2-201ENST00000441819 155 ntBASIC1.75□□□□□ -2.13
HOXC13P31276 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.75□□□□□ -2.13
HOXC13P31276 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXC13P31276 HMGN2P9-201ENST00000476875 229 ntBASIC1.75□□□□□ -2.13
HOXC13P31276 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.75□□□□□ -2.13
HOXC13P31276 RN7SKP164-201ENST00000516138 266 ntBASIC1.75□□□□□ -2.13
HOXC13P31276 RNU2-12P-201ENST00000517216 168 ntBASIC1.75□□□□□ -2.13
HOXC13P31276 AC136628.3-201ENST00000521868 290 ntBASIC1.75□□□□□ -2.13
HOXC13P31276 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.75□□□□□ -2.13
HOXC13P31276 AC024614.2-201ENST00000577584 372 ntBASIC1.75□□□□□ -2.13
HOXC13P31276 AC011603.4-201ENST00000611325 277 ntBASIC1.75□□□□□ -2.13
HOXC13P31276 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
HOXC13P31276 RNU6-103P-201ENST00000363686 107 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 RNU6-899P-201ENST00000363947 107 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 Y_RNA.287-201ENST00000364853 94 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 SNORA25.9-201ENST00000365087 128 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 RNU6-969P-201ENST00000383900 105 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 Y_RNA.525-201ENST00000384570 113 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 RNU6-296P-201ENST00000384608 107 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 SNORA8.3-201ENST00000384679 139 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 MT-TT-201ENST00000387460 66 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 RNU6-360P-201ENST00000390944 104 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 RNU6-460P-201ENST00000391158 108 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 AL121914.1-201ENST00000450188 156 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 RNU6-561P-201ENST00000516222 102 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 RNU6-1146P-201ENST00000516282 102 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 RNA5SP481-201ENST00000516814 122 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 RNU1-117P-201ENST00000517041 158 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 AC109810.1-201ENST00000534066 224 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 AC084364.2-201ENST00000546924 395 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 AC112693.2-201ENST00000556538 232 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.74□□□□□ -2.13
HOXC13P31276 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HOXC13P31276 MIR337-201ENST00000362281 93 ntBASIC1.73□□□□□ -2.13
HOXC13P31276 Y_RNA.172-201ENST00000363765 102 ntBASIC1.73□□□□□ -2.13
HOXC13P31276 RNU1-42P-201ENST00000364033 160 ntBASIC1.73□□□□□ -2.13
HOXC13P31276 RNU6-407P-201ENST00000365280 104 ntBASIC1.73□□□□□ -2.13
HOXC13P31276 Y_RNA.337-201ENST00000365312 102 ntBASIC1.73□□□□□ -2.13
HOXC13P31276 MIR539-201ENST00000365690 78 ntBASIC1.73□□□□□ -2.13
HOXC13P31276 AL031003.1-201ENST00000404229 172 ntBASIC1.73□□□□□ -2.13
HOXC13P31276 CST2P1-201ENST00000425770 87 ntBASIC1.73□□□□□ -2.13
HOXC13P31276 RNU4-57P-201ENST00000515980 135 ntBASIC1.73□□□□□ -2.13
HOXC13P31276 RNU2-56P-201ENST00000516826 190 ntBASIC1.73□□□□□ -2.13
HOXC13P31276 AL353149.1-201ENST00000610667 244 ntBASIC1.73□□□□□ -2.13
HOXC13P31276 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.73□□□□□ -2.13
HOXC13P31276 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.73□□□□□ -2.13
HOXC13P31276 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
HOXC13P31276 AL161722.3-201ENST00000605789 2983 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms