Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 BTF3P11-201ENST00000426582 477 ntBASIC1.25□□□□□ -2.21
TSPAN1O60635 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
TSPAN1O60635 COX6CP14-201ENST00000469580 174 ntBASIC1.25□□□□□ -2.21
TSPAN1O60635 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.25□□□□□ -2.21
TSPAN1O60635 RNU6-1338P-201ENST00000516328 91 ntBASIC1.25□□□□□ -2.21
TSPAN1O60635 AC090142.3-201ENST00000519012 385 ntBASIC1.25□□□□□ -2.21
TSPAN1O60635 AC008737.2-201ENST00000599446 118 ntBASIC1.25□□□□□ -2.21
TSPAN1O60635 snoU18.1-201ENST00000629629 71 ntBASIC1.25□□□□□ -2.21
TSPAN1O60635 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
TSPAN1O60635 MIR96-201ENST00000362288 78 ntBASIC1.24□□□□□ -2.21
TSPAN1O60635 RNU6-674P-201ENST00000363831 107 ntBASIC1.24□□□□□ -2.21
TSPAN1O60635 Y_RNA.336-201ENST00000365307 109 ntBASIC1.24□□□□□ -2.21
TSPAN1O60635 MIR452-201ENST00000385020 85 ntBASIC1.24□□□□□ -2.21
TSPAN1O60635 AC048334.1-201ENST00000477975 159 ntBASIC1.24□□□□□ -2.21
TSPAN1O60635 AL133373.1-201ENST00000497098 94 ntBASIC1.24□□□□□ -2.21
TSPAN1O60635 SERF1AP1-201ENST00000514575 187 ntBASIC1.24□□□□□ -2.21
TSPAN1O60635 SNORA27.4-201ENST00000516650 95 ntBASIC1.24□□□□□ -2.21
TSPAN1O60635 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
TSPAN1O60635 AC037487.3-201ENST00000606668 112 ntBASIC1.24□□□□□ -2.21
TSPAN1O60635 AP001282.2-201ENST00000616149 309 ntBASIC1.24□□□□□ -2.21
TSPAN1O60635 AC013791.1-201ENST00000616619 62 ntBASIC1.24□□□□□ -2.21
TSPAN1O60635 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
TSPAN1O60635 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
TSPAN1O60635 RNU6-1205P-201ENST00000363625 106 ntBASIC1.23□□□□□ -2.21
TSPAN1O60635 Y_RNA.217-201ENST00000364214 105 ntBASIC1.23□□□□□ -2.21
TSPAN1O60635 RNU4-10P-201ENST00000364383 140 ntBASIC1.23□□□□□ -2.21
TSPAN1O60635 Y_RNA.237-201ENST00000364439 102 ntBASIC1.23□□□□□ -2.21
TSPAN1O60635 SNORD72-201ENST00000390994 80 ntBASIC1.23□□□□□ -2.21
TSPAN1O60635 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.23□□□□□ -2.21
TSPAN1O60635 Y_RNA.641-201ENST00000459414 105 ntBASIC1.23□□□□□ -2.21
TSPAN1O60635 AL008718.3-201ENST00000610217 321 ntBASIC1.23□□□□□ -2.21
TSPAN1O60635 AL096861.1-201ENST00000610899 123 ntBASIC1.23□□□□□ -2.21
TSPAN1O60635 MIR6504-201ENST00000613520 61 ntBASIC1.23□□□□□ -2.21
TSPAN1O60635 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.23□□□□□ -2.21
TSPAN1O60635 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
TSPAN1O60635 Y_RNA.117-201ENST00000363294 101 ntBASIC1.22□□□□□ -2.21
TSPAN1O60635 MT-TW-201ENST00000387382 68 ntBASIC1.22□□□□□ -2.21
TSPAN1O60635 SNORD11-201ENST00000459124 84 ntBASIC1.22□□□□□ -2.21
TSPAN1O60635 TRBVB-201ENST00000477100 408 ntBASIC1.22□□□□□ -2.21
TSPAN1O60635 SNORA31.2-201ENST00000516019 134 ntBASIC1.22□□□□□ -2.21
TSPAN1O60635 SNORA18.7-201ENST00000516910 131 ntBASIC1.22□□□□□ -2.21
TSPAN1O60635 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.22□□□□□ -2.21
TSPAN1O60635 MIR5692C2-201ENST00000577959 77 ntBASIC1.22□□□□□ -2.21
TSPAN1O60635 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
TSPAN1O60635 SNORD114-27-201ENST00000363766 70 ntBASIC1.21□□□□□ -2.22
TSPAN1O60635 SNORD14E-201ENST00000364009 85 ntBASIC1.21□□□□□ -2.22
TSPAN1O60635 Y_RNA.293-201ENST00000364908 93 ntBASIC1.21□□□□□ -2.22
TSPAN1O60635 Y_RNA.483-201ENST00000384380 101 ntBASIC1.21□□□□□ -2.22
TSPAN1O60635 RNU6-713P-201ENST00000384761 107 ntBASIC1.21□□□□□ -2.22
TSPAN1O60635 MIR136-201ENST00000385207 82 ntBASIC1.21□□□□□ -2.22
TSPAN1O60635 MIR548F4-201ENST00000408515 105 ntBASIC1.21□□□□□ -2.22
TSPAN1O60635 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
TSPAN1O60635 snoU13.25-201ENST00000458945 104 ntBASIC1.21□□□□□ -2.22
TSPAN1O60635 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.21□□□□□ -2.22
TSPAN1O60635 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
TSPAN1O60635 Y_RNA.714-201ENST00000517065 90 ntBASIC1.21□□□□□ -2.22
TSPAN1O60635 MIR3192-201ENST00000584920 77 ntBASIC1.21□□□□□ -2.22
TSPAN1O60635 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
TSPAN1O60635 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TSPAN1O60635 Y_RNA.363-201ENST00000365529 113 ntBASIC1.2□□□□□ -2.22
TSPAN1O60635 Y_RNA.459-201ENST00000384251 102 ntBASIC1.2□□□□□ -2.22
TSPAN1O60635 RNU6-738P-201ENST00000384531 106 ntBASIC1.2□□□□□ -2.22
TSPAN1O60635 Y_RNA.574-201ENST00000384766 95 ntBASIC1.2□□□□□ -2.22
TSPAN1O60635 AL603910.2-201ENST00000407268 136 ntBASIC1.2□□□□□ -2.22
TSPAN1O60635 RNU6-651P-201ENST00000411040 105 ntBASIC1.2□□□□□ -2.22
TSPAN1O60635 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.2□□□□□ -2.22
TSPAN1O60635 AL442663.2-201ENST00000554385 511 ntBASIC1.2□□□□□ -2.22
TSPAN1O60635 MIR2681-201ENST00000581814 105 ntBASIC1.2□□□□□ -2.22
TSPAN1O60635 AC008507.4-201ENST00000585464 127 ntBASIC1.2□□□□□ -2.22
TSPAN1O60635 AC136443.5-201ENST00000603741 370 ntBASIC1.2□□□□□ -2.22
TSPAN1O60635 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
TSPAN1O60635 Y_RNA.145-201ENST00000363527 102 ntBASIC1.19□□□□□ -2.22
TSPAN1O60635 RNU6-1289P-201ENST00000384431 106 ntBASIC1.19□□□□□ -2.22
TSPAN1O60635 Y_RNA.572-201ENST00000384757 98 ntBASIC1.19□□□□□ -2.22
TSPAN1O60635 MRPL35P3-201ENST00000421557 364 ntBASIC1.19□□□□□ -2.22
TSPAN1O60635 MTND4LP30-201ENST00000454092 297 ntBASIC1.19□□□□□ -2.22
TSPAN1O60635 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
TSPAN1O60635 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
TSPAN1O60635 Y_RNA.673-201ENST00000516306 88 ntBASIC1.19□□□□□ -2.22
TSPAN1O60635 SNORD111.1-201ENST00000516421 86 ntBASIC1.19□□□□□ -2.22
TSPAN1O60635 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.19□□□□□ -2.22
TSPAN1O60635 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.19□□□□□ -2.22
TSPAN1O60635 AL360085.1-201ENST00000604713 532 ntBASIC1.19□□□□□ -2.22
TSPAN1O60635 MIR8062-201ENST00000621515 85 ntBASIC1.19□□□□□ -2.22
TSPAN1O60635 RNU6-740P-201ENST00000364734 105 ntBASIC1.18□□□□□ -2.22
TSPAN1O60635 RNU6-144P-201ENST00000383951 107 ntBASIC1.18□□□□□ -2.22
TSPAN1O60635 MIR802-201ENST00000390235 94 ntBASIC1.18□□□□□ -2.22
TSPAN1O60635 RNU6-910P-201ENST00000390844 107 ntBASIC1.18□□□□□ -2.22
TSPAN1O60635 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.18□□□□□ -2.22
TSPAN1O60635 RNU6-1054P-201ENST00000411293 104 ntBASIC1.18□□□□□ -2.22
TSPAN1O60635 SNRPGP14-201ENST00000435400 219 ntBASIC1.18□□□□□ -2.22
TSPAN1O60635 AC245047.7-201ENST00000440265 293 ntBASIC1.18□□□□□ -2.22
TSPAN1O60635 HMGN2P32-201ENST00000444648 269 ntBASIC1.18□□□□□ -2.22
TSPAN1O60635 SNORA74.3-201ENST00000517108 154 ntBASIC1.18□□□□□ -2.22
TSPAN1O60635 AL049861.1-201ENST00000603130 150 ntBASIC1.18□□□□□ -2.22
TSPAN1O60635 AL357312.1-201ENST00000603879 298 ntBASIC1.18□□□□□ -2.22
TSPAN1O60635 AL022345.2-201ENST00000606307 135 ntBASIC1.18□□□□□ -2.22
TSPAN1O60635 MIR6767-201ENST00000637302 66 ntBASIC1.18□□□□□ -2.22
TSPAN1O60635 UBE2WP1-201ENST00000362030 340 ntBASIC1.17□□□□□ -2.22
TSPAN1O60635 RNU6-268P-201ENST00000364174 107 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 222.1 ms