Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 SNORA28-201ENST00000606769 126 ntBASIC2.42□□□□□ -2.02
NPHS1O60500 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.42□□□□□ -2.02
NPHS1O60500 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NPHS1O60500 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.41□□□□□ -2.02
NPHS1O60500 RNU6-859P-201ENST00000362728 107 ntBASIC2.41□□□□□ -2.02
NPHS1O60500 SNORA63D-201ENST00000364359 132 ntBASIC2.41□□□□□ -2.02
NPHS1O60500 Y_RNA.410-201ENST00000383992 113 ntBASIC2.41□□□□□ -2.02
NPHS1O60500 RNA5SP465-201ENST00000391195 109 ntBASIC2.41□□□□□ -2.02
NPHS1O60500 CALM2P4-201ENST00000430810 426 ntBASIC2.41□□□□□ -2.02
NPHS1O60500 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.41□□□□□ -2.02
NPHS1O60500 AC069257.2-201ENST00000441819 155 ntBASIC2.41□□□□□ -2.02
NPHS1O60500 ELOCP29-201ENST00000588193 334 ntBASIC2.41□□□□□ -2.02
NPHS1O60500 AC015726.2-201ENST00000620112 122 ntBASIC2.41□□□□□ -2.02
NPHS1O60500 U4.3-201ENST00000621047 82 ntBASIC2.41□□□□□ -2.02
NPHS1O60500 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.41□□□□□ -2.02
NPHS1O60500 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NPHS1O60500 SNORA2.2-201ENST00000365473 135 ntBASIC2.4□□□□□ -2.03
NPHS1O60500 RNU6-1189P-201ENST00000383958 107 ntBASIC2.4□□□□□ -2.03
NPHS1O60500 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
NPHS1O60500 RNY4P18-201ENST00000391107 89 ntBASIC2.4□□□□□ -2.03
NPHS1O60500 RN7SKP200-201ENST00000410564 320 ntBASIC2.4□□□□□ -2.03
NPHS1O60500 RNU6-938P-201ENST00000411285 103 ntBASIC2.4□□□□□ -2.03
NPHS1O60500 AL445646.1-201ENST00000431784 216 ntBASIC2.4□□□□□ -2.03
NPHS1O60500 HMGN2P32-201ENST00000444648 269 ntBASIC2.4□□□□□ -2.03
NPHS1O60500 SNORD36C-201ENST00000516733 66 ntBASIC2.4□□□□□ -2.03
NPHS1O60500 AL137790.1-201ENST00000634283 177 ntBASIC2.4□□□□□ -2.03
NPHS1O60500 MIR21-201ENST00000362134 72 ntBASIC2.39□□□□□ -2.03
NPHS1O60500 SNORA63.4-201ENST00000362763 126 ntBASIC2.39□□□□□ -2.03
NPHS1O60500 MIR27B-201ENST00000385129 97 ntBASIC2.39□□□□□ -2.03
NPHS1O60500 MIRLET7F2-201ENST00000385277 83 ntBASIC2.39□□□□□ -2.03
NPHS1O60500 SNORA48.1-201ENST00000390879 135 ntBASIC2.39□□□□□ -2.03
NPHS1O60500 U8.16-201ENST00000391279 133 ntBASIC2.39□□□□□ -2.03
NPHS1O60500 RNA5SP270-201ENST00000411361 118 ntBASIC2.39□□□□□ -2.03
NPHS1O60500 CYCTP-201ENST00000504253 315 ntBASIC2.39□□□□□ -2.03
NPHS1O60500 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.39□□□□□ -2.03
NPHS1O60500 AL670379.3-201ENST00000605040 251 ntBASIC2.39□□□□□ -2.03
NPHS1O60500 AC245884.12-201ENST00000615364 59 ntBASIC2.39□□□□□ -2.03
NPHS1O60500 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
NPHS1O60500 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NPHS1O60500 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
NPHS1O60500 SNORA3A-201ENST00000364113 130 ntBASIC2.38□□□□□ -2.03
NPHS1O60500 RNU1-138P-201ENST00000384093 164 ntBASIC2.38□□□□□ -2.03
NPHS1O60500 AL034345.1-201ENST00000407768 123 ntBASIC2.38□□□□□ -2.03
NPHS1O60500 MIR1263-201ENST00000408324 86 ntBASIC2.38□□□□□ -2.03
NPHS1O60500 RNA5SP501-201ENST00000410990 112 ntBASIC2.38□□□□□ -2.03
NPHS1O60500 Y_RNA.709-201ENST00000516952 92 ntBASIC2.38□□□□□ -2.03
NPHS1O60500 SUB1P4-201ENST00000566062 339 ntBASIC2.38□□□□□ -2.03
NPHS1O60500 AL049779.4-201ENST00000604500 156 ntBASIC2.38□□□□□ -2.03
NPHS1O60500 AC067747.1-201ENST00000608026 250 ntBASIC2.38□□□□□ -2.03
NPHS1O60500 AC025166.1-201ENST00000612411 163 ntBASIC2.38□□□□□ -2.03
NPHS1O60500 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
NPHS1O60500 AC016717.2-201ENST00000609089 5141 ntBASIC2.37□□□□□ -2.03
NPHS1O60500 RNU6-153P-201ENST00000364422 104 ntBASIC2.37□□□□□ -2.03
NPHS1O60500 Y_RNA.366-201ENST00000365540 102 ntBASIC2.37□□□□□ -2.03
NPHS1O60500 MIR548A3-201ENST00000385297 97 ntBASIC2.37□□□□□ -2.03
NPHS1O60500 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NPHS1O60500 SNORD109B-201ENST00000458961 67 ntBASIC2.37□□□□□ -2.03
NPHS1O60500 SNORD109A-201ENST00000459128 67 ntBASIC2.37□□□□□ -2.03
NPHS1O60500 RNU6-589P-201ENST00000516485 107 ntBASIC2.37□□□□□ -2.03
NPHS1O60500 RNA5SP168-201ENST00000516642 112 ntBASIC2.37□□□□□ -2.03
NPHS1O60500 RNU6-113P-201ENST00000516653 101 ntBASIC2.37□□□□□ -2.03
NPHS1O60500 RNA5SP437-201ENST00000517249 129 ntBASIC2.37□□□□□ -2.03
NPHS1O60500 AC027279.3-201ENST00000625055 122 ntBASIC2.37□□□□□ -2.03
NPHS1O60500 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NPHS1O60500 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
NPHS1O60500 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
NPHS1O60500 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NPHS1O60500 MTND5P18-201ENST00000445624 1801 ntBASIC2.36□□□□□ -2.03
NPHS1O60500 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.36□□□□□ -2.03
NPHS1O60500 Y_RNA.440-201ENST00000384120 114 ntBASIC2.36□□□□□ -2.03
NPHS1O60500 RNU6-424P-201ENST00000384367 105 ntBASIC2.36□□□□□ -2.03
NPHS1O60500 SNORD38C-201ENST00000384381 69 ntBASIC2.36□□□□□ -2.03
NPHS1O60500 RNU6-1031P-201ENST00000384773 107 ntBASIC2.36□□□□□ -2.03
NPHS1O60500 MIR520A-201ENST00000384862 85 ntBASIC2.36□□□□□ -2.03
NPHS1O60500 AL513328.1-201ENST00000446460 224 ntBASIC2.36□□□□□ -2.03
NPHS1O60500 RN7SKP132-201ENST00000516001 208 ntBASIC2.36□□□□□ -2.03
NPHS1O60500 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.36□□□□□ -2.03
NPHS1O60500 AP003484.1-201ENST00000530974 250 ntBASIC2.36□□□□□ -2.03
NPHS1O60500 AC002984.1-201ENST00000591692 448 ntBASIC2.36□□□□□ -2.03
NPHS1O60500 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.36□□□□□ -2.03
NPHS1O60500 AL121890.5-201ENST00000620848 304 ntBASIC2.36□□□□□ -2.03
NPHS1O60500 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NPHS1O60500 RNU6-112P-201ENST00000363599 104 ntBASIC2.35□□□□□ -2.03
NPHS1O60500 SNORD114-30-201ENST00000364448 72 ntBASIC2.35□□□□□ -2.03
NPHS1O60500 RNU1-51P-201ENST00000365345 176 ntBASIC2.35□□□□□ -2.03
NPHS1O60500 Y_RNA.346-201ENST00000365385 112 ntBASIC2.35□□□□□ -2.03
NPHS1O60500 RNU6-950P-201ENST00000384651 107 ntBASIC2.35□□□□□ -2.03
NPHS1O60500 RNU2-7P-201ENST00000410794 178 ntBASIC2.35□□□□□ -2.03
NPHS1O60500 COTL1P1-201ENST00000422309 375 ntBASIC2.35□□□□□ -2.03
NPHS1O60500 AC011753.1-201ENST00000451001 220 ntBASIC2.35□□□□□ -2.03
NPHS1O60500 RPL23AP63-201ENST00000498752 471 ntBASIC2.35□□□□□ -2.03
NPHS1O60500 PDCD5P2-201ENST00000507570 312 ntBASIC2.35□□□□□ -2.03
NPHS1O60500 RNU6-240P-201ENST00000516098 97 ntBASIC2.35□□□□□ -2.03
NPHS1O60500 RNA5SP320-201ENST00000516263 124 ntBASIC2.35□□□□□ -2.03
NPHS1O60500 SCARNA16.3-201ENST00000516595 184 ntBASIC2.35□□□□□ -2.03
NPHS1O60500 AL137067.1-201ENST00000615933 120 ntBASIC2.35□□□□□ -2.03
NPHS1O60500 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
NPHS1O60500 RNU6-296P-201ENST00000384608 107 ntBASIC2.34□□□□□ -2.03
NPHS1O60500 MIR548A1-201ENST00000385041 97 ntBASIC2.34□□□□□ -2.03
NPHS1O60500 AC015922.2-201ENST00000435593 184 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 226.5 ms