Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MTCO2P33-201ENST00000402100 465 ntBASIC1.27□□□□□ -2.21
PHF1O43189 MIR1304-201ENST00000408243 91 ntBASIC1.27□□□□□ -2.21
PHF1O43189 MIR1278-201ENST00000408753 81 ntBASIC1.27□□□□□ -2.21
PHF1O43189 RNU2-7P-201ENST00000410794 178 ntBASIC1.27□□□□□ -2.21
PHF1O43189 FTH1P12-201ENST00000432137 551 ntBASIC1.27□□□□□ -2.21
PHF1O43189 Z98949.2-201ENST00000440996 144 ntBASIC1.27□□□□□ -2.21
PHF1O43189 JTBP1-201ENST00000441314 247 ntBASIC1.27□□□□□ -2.21
PHF1O43189 RNU6-437P-201ENST00000459408 95 ntBASIC1.27□□□□□ -2.21
PHF1O43189 AL049830.1-201ENST00000468034 425 ntBASIC1.27□□□□□ -2.21
PHF1O43189 MIR4709-201ENST00000577272 72 ntBASIC1.27□□□□□ -2.21
PHF1O43189 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.27□□□□□ -2.21
PHF1O43189 SNORA28-201ENST00000606769 126 ntBASIC1.27□□□□□ -2.21
PHF1O43189 AC073349.3-201ENST00000617616 186 ntBASIC1.27□□□□□ -2.21
PHF1O43189 AL513423.1-201ENST00000621695 132 ntBASIC1.27□□□□□ -2.21
PHF1O43189 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.26□□□□□ -2.21
PHF1O43189 AC134026.1-201ENST00000623249 2239 ntBASIC1.26□□□□□ -2.21
PHF1O43189 Y_RNA.277-201ENST00000364754 102 ntBASIC1.26□□□□□ -2.21
PHF1O43189 RNU6-53P-201ENST00000365367 106 ntBASIC1.26□□□□□ -2.21
PHF1O43189 Y_RNA.374-201ENST00000365606 101 ntBASIC1.26□□□□□ -2.21
PHF1O43189 RNU6-1080P-201ENST00000383982 107 ntBASIC1.26□□□□□ -2.21
PHF1O43189 RNU6-424P-201ENST00000384367 105 ntBASIC1.26□□□□□ -2.21
PHF1O43189 MIR598-201ENST00000384868 97 ntBASIC1.26□□□□□ -2.21
PHF1O43189 MIR517C-201ENST00000385103 95 ntBASIC1.26□□□□□ -2.21
PHF1O43189 AL034345.1-201ENST00000407768 123 ntBASIC1.26□□□□□ -2.21
PHF1O43189 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.26□□□□□ -2.21
PHF1O43189 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.26□□□□□ -2.21
PHF1O43189 COX6CP14-201ENST00000469580 174 ntBASIC1.26□□□□□ -2.21
PHF1O43189 RPL23AP54-201ENST00000495129 419 ntBASIC1.26□□□□□ -2.21
PHF1O43189 RNU2-56P-201ENST00000516826 190 ntBASIC1.26□□□□□ -2.21
PHF1O43189 SNORA31.24-201ENST00000517232 57 ntBASIC1.26□□□□□ -2.21
PHF1O43189 AP000942.4-201ENST00000604811 241 ntBASIC1.26□□□□□ -2.21
PHF1O43189 AL442067.1-201ENST00000613261 223 ntBASIC1.26□□□□□ -2.21
PHF1O43189 AL591926.4-201ENST00000616895 298 ntBASIC1.26□□□□□ -2.21
PHF1O43189 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
PHF1O43189 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
PHF1O43189 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
PHF1O43189 MIR302D-201ENST00000362275 68 ntBASIC1.25□□□□□ -2.21
PHF1O43189 RNU6-653P-201ENST00000363074 106 ntBASIC1.25□□□□□ -2.21
PHF1O43189 RNU6-1205P-201ENST00000363625 106 ntBASIC1.25□□□□□ -2.21
PHF1O43189 RNY4P28-201ENST00000365281 93 ntBASIC1.25□□□□□ -2.21
PHF1O43189 RNU6-203P-201ENST00000384038 104 ntBASIC1.25□□□□□ -2.21
PHF1O43189 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
PHF1O43189 Y_RNA.590-201ENST00000410140 107 ntBASIC1.25□□□□□ -2.21
PHF1O43189 COX6CP10-201ENST00000416832 224 ntBASIC1.25□□□□□ -2.21
PHF1O43189 AL354695.1-201ENST00000427935 228 ntBASIC1.25□□□□□ -2.21
PHF1O43189 STAG3L5P-204ENST00000443759 179 ntBASIC1.25□□□□□ -2.21
PHF1O43189 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.25□□□□□ -2.21
PHF1O43189 RNU4-71P-201ENST00000516258 113 ntBASIC1.25□□□□□ -2.21
PHF1O43189 RNU6-111P-201ENST00000517179 105 ntBASIC1.25□□□□□ -2.21
PHF1O43189 MIR8074-201ENST00000615081 81 ntBASIC1.25□□□□□ -2.21
PHF1O43189 AC095038.3-201ENST00000634439 195 ntBASIC1.25□□□□□ -2.21
PHF1O43189 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
PHF1O43189 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
PHF1O43189 RNU6-1123P-201ENST00000362347 106 ntBASIC1.24□□□□□ -2.21
PHF1O43189 Y_RNA.188-201ENST00000363952 111 ntBASIC1.24□□□□□ -2.21
PHF1O43189 Y_RNA.205-201ENST00000364128 113 ntBASIC1.24□□□□□ -2.21
PHF1O43189 Y_RNA.477-201ENST00000384352 108 ntBASIC1.24□□□□□ -2.21
PHF1O43189 MIR522-201ENST00000385071 87 ntBASIC1.24□□□□□ -2.21
PHF1O43189 RPL30P13-201ENST00000418873 348 ntBASIC1.24□□□□□ -2.21
PHF1O43189 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.24□□□□□ -2.21
PHF1O43189 AC233266.1-201ENST00000454518 96 ntBASIC1.24□□□□□ -2.21
PHF1O43189 SNORD11-201ENST00000459124 84 ntBASIC1.24□□□□□ -2.21
PHF1O43189 AC005908.1-201ENST00000468701 347 ntBASIC1.24□□□□□ -2.21
PHF1O43189 NDUFA4P2-201ENST00000489989 244 ntBASIC1.24□□□□□ -2.21
PHF1O43189 SNORD116-28-201ENST00000516123 91 ntBASIC1.24□□□□□ -2.21
PHF1O43189 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.24□□□□□ -2.21
PHF1O43189 AL160236.1-201ENST00000556317 195 ntBASIC1.24□□□□□ -2.21
PHF1O43189 AC015688.6-201ENST00000577737 104 ntBASIC1.24□□□□□ -2.21
PHF1O43189 MIR4422-201ENST00000581938 83 ntBASIC1.24□□□□□ -2.21
PHF1O43189 AC009779.6-201ENST00000603972 165 ntBASIC1.24□□□□□ -2.21
PHF1O43189 AC242852.1-201ENST00000612151 96 ntBASIC1.24□□□□□ -2.21
PHF1O43189 AC244015.1-201ENST00000622301 99 ntBASIC1.24□□□□□ -2.21
PHF1O43189 AC027279.3-201ENST00000625055 122 ntBASIC1.24□□□□□ -2.21
PHF1O43189 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
PHF1O43189 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
PHF1O43189 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
PHF1O43189 MIR96-201ENST00000362288 78 ntBASIC1.23□□□□□ -2.21
PHF1O43189 SNORD27-201ENST00000363981 72 ntBASIC1.23□□□□□ -2.21
PHF1O43189 Y_RNA.265-201ENST00000364677 108 ntBASIC1.23□□□□□ -2.21
PHF1O43189 Y_RNA.292-201ENST00000364904 97 ntBASIC1.23□□□□□ -2.21
PHF1O43189 Y_RNA.354-201ENST00000365448 111 ntBASIC1.23□□□□□ -2.21
PHF1O43189 Y_RNA.489-201ENST00000384410 101 ntBASIC1.23□□□□□ -2.21
PHF1O43189 MIR626-201ENST00000385032 94 ntBASIC1.23□□□□□ -2.21
PHF1O43189 MIR660-201ENST00000385235 97 ntBASIC1.23□□□□□ -2.21
PHF1O43189 RN7SKP51-201ENST00000410781 304 ntBASIC1.23□□□□□ -2.21
PHF1O43189 CALM2P4-201ENST00000430810 426 ntBASIC1.23□□□□□ -2.21
PHF1O43189 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.23□□□□□ -2.21
PHF1O43189 PGBD4P5-201ENST00000445958 426 ntBASIC1.23□□□□□ -2.21
PHF1O43189 RNU7-34P-201ENST00000459394 64 ntBASIC1.23□□□□□ -2.21
PHF1O43189 AC092991.1-201ENST00000477176 376 ntBASIC1.23□□□□□ -2.21
PHF1O43189 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.23□□□□□ -2.21
PHF1O43189 MIR2681-201ENST00000581814 105 ntBASIC1.23□□□□□ -2.21
PHF1O43189 AC087685.1-201ENST00000587507 141 ntBASIC1.23□□□□□ -2.21
PHF1O43189 AL161722.3-201ENST00000605789 2983 ntBASIC1.23□□□□□ -2.21
PHF1O43189 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.23□□□□□ -2.21
PHF1O43189 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
PHF1O43189 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
PHF1O43189 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.22□□□□□ -2.21
PHF1O43189 Y_RNA.54-201ENST00000362766 105 ntBASIC1.22□□□□□ -2.21
PHF1O43189 RNU6-1209P-201ENST00000363655 107 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms