Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AP1B1P2-201ENST00000416196 106 ntBASIC1.17□□□□□ -2.22
HDAC3O15379 OR9P1P-201ENST00000496431 281 ntBASIC1.17□□□□□ -2.22
HDAC3O15379 RNA5SP481-201ENST00000516814 122 ntBASIC1.17□□□□□ -2.22
HDAC3O15379 AC100767.1-201ENST00000528178 123 ntBASIC1.17□□□□□ -2.22
HDAC3O15379 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.17□□□□□ -2.22
HDAC3O15379 AC019288.1-201ENST00000557918 224 ntBASIC1.17□□□□□ -2.22
HDAC3O15379 MIR4709-201ENST00000577272 72 ntBASIC1.17□□□□□ -2.22
HDAC3O15379 AC073349.3-201ENST00000617616 186 ntBASIC1.17□□□□□ -2.22
HDAC3O15379 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.17□□□□□ -2.22
HDAC3O15379 SNORD33-201ENST00000362761 85 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 RNU6-1205P-201ENST00000363625 106 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 snoU2_19.4-201ENST00000364329 80 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 RNU4-41P-201ENST00000364426 143 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 Y_RNA.253-201ENST00000364562 112 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 RNU6-923P-201ENST00000364753 107 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 Y_RNA.293-201ENST00000364908 93 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 RNU6-1318P-201ENST00000365389 103 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 MIR1298-201ENST00000408783 112 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 AL591704.2-201ENST00000421658 181 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.16□□□□□ -2.22
HDAC3O15379 CALM2P4-201ENST00000430810 426 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 Z98949.2-201ENST00000440996 144 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 RNU6-437P-201ENST00000459408 95 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 RNU7-94P-201ENST00000459576 63 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 RPL30P7-201ENST00000479312 323 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.16□□□□□ -2.22
HDAC3O15379 RNU4-71P-201ENST00000516258 113 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.16□□□□□ -2.22
HDAC3O15379 AP002004.2-201ENST00000531656 154 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 SNORA77B-201ENST00000578179 125 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 AL591926.4-201ENST00000616895 298 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.16□□□□□ -2.22
HDAC3O15379 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HDAC3O15379 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
HDAC3O15379 MIRLET7C-201ENST00000362160 84 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 Y_RNA.24-201ENST00000362508 103 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 Y_RNA.203-201ENST00000364106 102 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 Y_RNA.796-201ENST00000364268 102 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 Y_RNA.257-201ENST00000364596 102 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 Y_RNA.799-201ENST00000364992 102 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 Y_RNA.308-201ENST00000365043 101 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 RNU6-47P-201ENST00000383866 107 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 RNU6-969P-201ENST00000383900 105 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 RNU6-360P-201ENST00000390944 104 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 RNU6-493P-201ENST00000391321 108 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 COX6CP10-201ENST00000416832 224 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.15□□□□□ -2.23
HDAC3O15379 SCARNA8-201ENST00000515924 131 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 RNU6-138P-201ENST00000515952 107 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 RNU2-56P-201ENST00000516826 190 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 RNU7-116P-201ENST00000516940 62 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 RNU6-1116P-201ENST00000517269 99 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 MIR4308-201ENST00000580634 81 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 AC141273.2-201ENST00000618989 130 ntBASIC1.15□□□□□ -2.23
HDAC3O15379 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
HDAC3O15379 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
HDAC3O15379 RNU6-1209P-201ENST00000363655 107 ntBASIC1.14□□□□□ -2.23
HDAC3O15379 RNU6-674P-201ENST00000363831 107 ntBASIC1.14□□□□□ -2.23
HDAC3O15379 Y_RNA.200-201ENST00000364018 102 ntBASIC1.14□□□□□ -2.23
HDAC3O15379 MIR626-201ENST00000385032 94 ntBASIC1.14□□□□□ -2.23
HDAC3O15379 U8.16-201ENST00000391279 133 ntBASIC1.14□□□□□ -2.23
HDAC3O15379 JTBP1-201ENST00000441314 247 ntBASIC1.14□□□□□ -2.23
HDAC3O15379 AC009474.2-201ENST00000451383 136 ntBASIC1.14□□□□□ -2.23
HDAC3O15379 AL049830.1-201ENST00000468034 425 ntBASIC1.14□□□□□ -2.23
HDAC3O15379 NDUFA4P2-201ENST00000489989 244 ntBASIC1.14□□□□□ -2.23
HDAC3O15379 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.14□□□□□ -2.23
HDAC3O15379 RNU6-453P-201ENST00000516819 85 ntBASIC1.14□□□□□ -2.23
HDAC3O15379 MIR4421-201ENST00000578133 69 ntBASIC1.14□□□□□ -2.23
HDAC3O15379 HSPE1P19-201ENST00000603327 295 ntBASIC1.14□□□□□ -2.23
HDAC3O15379 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.13□□□□□ -2.23
HDAC3O15379 MIR411-201ENST00000362239 96 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 MIR302D-201ENST00000362275 68 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 RNU6-414P-201ENST00000363705 104 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 Y_RNA.199-201ENST00000364014 102 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 Y_RNA.229-201ENST00000364347 113 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 Y_RNA.265-201ENST00000364677 108 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 RNU6-424P-201ENST00000384367 105 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 Y_RNA.552-201ENST00000384665 112 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 MT-TT-201ENST00000387460 66 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.13□□□□□ -2.23
HDAC3O15379 RN7SKP200-201ENST00000410564 320 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 SNORD11-201ENST00000459124 84 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.13□□□□□ -2.23
HDAC3O15379 AC022559.1-201ENST00000520905 205 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 RPL23AP91-201ENST00000569211 455 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 AL021707.8-201ENST00000609428 183 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 Y_RNA.802-201ENST00000614892 130 ntBASIC1.13□□□□□ -2.23
HDAC3O15379 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HDAC3O15379 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
HDAC3O15379 Y_RNA.83-201ENST00000363005 113 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 SNORD68-201ENST00000363214 84 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 SNORA7.1-201ENST00000363750 139 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 Y_RNA.262-201ENST00000364641 102 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 RNU6-200P-201ENST00000364743 107 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 RNU6-144P-201ENST00000383951 107 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 MIR522-201ENST00000385071 87 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 MIR526A2-201ENST00000390198 65 ntBASIC1.12□□□□□ -2.23
HDAC3O15379 RNU6-918P-201ENST00000391219 106 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms