Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 MIR5688-201ENST00000580619 83 ntBASIC1.29□□□□□ -2.2
TO15178 AL008718.3-201ENST00000610217 321 ntBASIC1.29□□□□□ -2.2
TO15178 7SK.8-201ENST00000612110 250 ntBASIC1.29□□□□□ -2.2
TO15178 7SK.11-201ENST00000615477 250 ntBASIC1.29□□□□□ -2.2
TO15178 U2.14-201ENST00000615943 113 ntBASIC1.29□□□□□ -2.2
TO15178 7SK.13-201ENST00000622040 250 ntBASIC1.29□□□□□ -2.2
TO15178 AC099654.10-201ENST00000640395 161 ntBASIC1.29□□□□□ -2.2
TO15178 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
TO15178 Y_RNA.133-201ENST00000363428 110 ntBASIC1.28□□□□□ -2.2
TO15178 RNU6-442P-201ENST00000383968 104 ntBASIC1.28□□□□□ -2.2
TO15178 RNU6-211P-201ENST00000384047 107 ntBASIC1.28□□□□□ -2.2
TO15178 MIR15B-201ENST00000385045 98 ntBASIC1.28□□□□□ -2.2
TO15178 MIR136-201ENST00000385207 82 ntBASIC1.28□□□□□ -2.2
TO15178 MTCYBP9-201ENST00000431021 303 ntBASIC1.28□□□□□ -2.2
TO15178 SNRPGP13-201ENST00000442212 177 ntBASIC1.28□□□□□ -2.2
TO15178 NDUFA4P2-201ENST00000489989 244 ntBASIC1.28□□□□□ -2.2
TO15178 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.28□□□□□ -2.2
TO15178 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.28□□□□□ -2.2
TO15178 RNA5SP458-201ENST00000516188 119 ntBASIC1.28□□□□□ -2.2
TO15178 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.28□□□□□ -2.2
TO15178 MIR8065-201ENST00000620577 100 ntBASIC1.28□□□□□ -2.2
TO15178 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
TO15178 Y_RNA.396-201ENST00000383949 103 ntBASIC1.27□□□□□ -2.21
TO15178 SNORD41-201ENST00000386967 70 ntBASIC1.27□□□□□ -2.21
TO15178 MIR526A2-201ENST00000390198 65 ntBASIC1.27□□□□□ -2.21
TO15178 AC015922.2-201ENST00000435593 184 ntBASIC1.27□□□□□ -2.21
TO15178 SNORD11-201ENST00000459124 84 ntBASIC1.27□□□□□ -2.21
TO15178 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.27□□□□□ -2.21
TO15178 DNAJC19P9-201ENST00000555084 351 ntBASIC1.27□□□□□ -2.21
TO15178 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.27□□□□□ -2.21
TO15178 AC008507.4-201ENST00000585464 127 ntBASIC1.27□□□□□ -2.21
TO15178 Y_RNA.802-201ENST00000614892 130 ntBASIC1.27□□□□□ -2.21
TO15178 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.27□□□□□ -2.21
TO15178 Y_RNA.117-201ENST00000363294 101 ntBASIC1.26□□□□□ -2.21
TO15178 RNU6-740P-201ENST00000364734 105 ntBASIC1.26□□□□□ -2.21
TO15178 Y_RNA.288-201ENST00000364854 92 ntBASIC1.26□□□□□ -2.21
TO15178 SNORD38C-201ENST00000384381 69 ntBASIC1.26□□□□□ -2.21
TO15178 RNU6-383P-201ENST00000410864 94 ntBASIC1.26□□□□□ -2.21
TO15178 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.26□□□□□ -2.21
TO15178 RPL39P39-201ENST00000455840 151 ntBASIC1.26□□□□□ -2.21
TO15178 RNU7-95P-201ENST00000459222 64 ntBASIC1.26□□□□□ -2.21
TO15178 RNU7-40P-201ENST00000516397 64 ntBASIC1.26□□□□□ -2.21
TO15178 AC090142.3-201ENST00000519012 385 ntBASIC1.26□□□□□ -2.21
TO15178 AC006006.1-201ENST00000603082 144 ntBASIC1.26□□□□□ -2.21
TO15178 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TO15178 Y_RNA.82-201ENST00000363000 102 ntBASIC1.25□□□□□ -2.21
TO15178 Y_RNA.92-201ENST00000363043 102 ntBASIC1.25□□□□□ -2.21
TO15178 Y_RNA.140-201ENST00000363474 103 ntBASIC1.25□□□□□ -2.21
TO15178 Y_RNA.235-201ENST00000364412 102 ntBASIC1.25□□□□□ -2.21
TO15178 Y_RNA.306-201ENST00000365015 102 ntBASIC1.25□□□□□ -2.21
TO15178 Y_RNA.312-201ENST00000365089 102 ntBASIC1.25□□□□□ -2.21
TO15178 Y_RNA.322-201ENST00000365151 102 ntBASIC1.25□□□□□ -2.21
TO15178 Y_RNA.352-201ENST00000365439 102 ntBASIC1.25□□□□□ -2.21
TO15178 MIR516B2-201ENST00000385190 85 ntBASIC1.25□□□□□ -2.21
TO15178 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
TO15178 AL118496.2-201ENST00000448300 230 ntBASIC1.25□□□□□ -2.21
TO15178 Y_RNA.650-201ENST00000459002 102 ntBASIC1.25□□□□□ -2.21
TO15178 RNA5SP61-201ENST00000516453 100 ntBASIC1.25□□□□□ -2.21
TO15178 Y_RNA.777-201ENST00000516982 102 ntBASIC1.25□□□□□ -2.21
TO15178 MIR4421-201ENST00000578133 69 ntBASIC1.25□□□□□ -2.21
TO15178 Y_RNA.771-201ENST00000598668 102 ntBASIC1.25□□□□□ -2.21
TO15178 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
TO15178 Y_RNA.789-201ENST00000622480 102 ntBASIC1.25□□□□□ -2.21
TO15178 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.25□□□□□ -2.21
TO15178 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
TO15178 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TO15178 Y_RNA.338-201ENST00000365320 114 ntBASIC1.24□□□□□ -2.21
TO15178 SNORA8.3-201ENST00000384679 139 ntBASIC1.24□□□□□ -2.21
TO15178 MIR618-201ENST00000385287 98 ntBASIC1.24□□□□□ -2.21
TO15178 Y_RNA.590-201ENST00000410140 107 ntBASIC1.24□□□□□ -2.21
TO15178 AP1B1P2-201ENST00000416196 106 ntBASIC1.24□□□□□ -2.21
TO15178 BTF3P4-201ENST00000418852 495 ntBASIC1.24□□□□□ -2.21
TO15178 SNORD2.1-201ENST00000458762 69 ntBASIC1.24□□□□□ -2.21
TO15178 SNORD127-201ENST00000458892 86 ntBASIC1.24□□□□□ -2.21
TO15178 RNU6-947P-201ENST00000516264 106 ntBASIC1.24□□□□□ -2.21
TO15178 Y_RNA.679-201ENST00000516416 91 ntBASIC1.24□□□□□ -2.21
TO15178 RNU6-165P-201ENST00000517170 99 ntBASIC1.24□□□□□ -2.21
TO15178 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.24□□□□□ -2.21
TO15178 uc_338.4-201ENST00000616635 176 ntBASIC1.24□□□□□ -2.21
TO15178 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.23□□□□□ -2.21
TO15178 AC009474.2-201ENST00000451383 136 ntBASIC1.23□□□□□ -2.21
TO15178 RNU1-123P-201ENST00000458950 160 ntBASIC1.23□□□□□ -2.21
TO15178 RNU1-92P-201ENST00000517017 135 ntBASIC1.23□□□□□ -2.21
TO15178 AC012433.1-201ENST00000588916 398 ntBASIC1.23□□□□□ -2.21
TO15178 AL021707.8-201ENST00000609428 183 ntBASIC1.23□□□□□ -2.21
TO15178 AC068700.1-201ENST00000565862 3754 ntBASIC1.23□□□□□ -2.21
TO15178 MIR378A-201ENST00000362177 66 ntBASIC1.22□□□□□ -2.21
TO15178 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
TO15178 Y_RNA.164-201ENST00000363709 102 ntBASIC1.22□□□□□ -2.21
TO15178 MIR568-201ENST00000385036 95 ntBASIC1.22□□□□□ -2.21
TO15178 SNORD72-201ENST00000390994 80 ntBASIC1.22□□□□□ -2.21
TO15178 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.22□□□□□ -2.21
TO15178 MIR548H3-201ENST00000408771 118 ntBASIC1.22□□□□□ -2.21
TO15178 MTND3P2-201ENST00000438452 342 ntBASIC1.22□□□□□ -2.21
TO15178 SNORA74.3-201ENST00000517108 154 ntBASIC1.22□□□□□ -2.21
TO15178 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
TO15178 AL049861.1-201ENST00000603130 150 ntBASIC1.22□□□□□ -2.21
TO15178 AL442644.1-201ENST00000454390 3105 ntBASIC1.22□□□□□ -2.21
TO15178 Y_RNA.24-201ENST00000362508 103 ntBASIC1.21□□□□□ -2.22
TO15178 Y_RNA.54-201ENST00000362766 105 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms