Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC113618.1-201ENST00000416747 285 ntBASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 SNRPGP14-201ENST00000435400 219 ntBASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU7-141P-201ENST00000459304 62 ntBASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 CYCTP-201ENST00000504253 315 ntBASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-922P-201ENST00000516753 99 ntBASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 PVT1_3.1-201ENST00000620853 95 ntBASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.87□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.16-201ENST00000362421 102 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.19-201ENST00000362462 99 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.203-201ENST00000364106 102 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.363-201ENST00000365529 113 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-1065P-201ENST00000384513 106 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-763P-201ENST00000390865 106 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 MIR1298-201ENST00000408783 112 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-1054P-201ENST00000411293 104 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC004941.2-201ENST00000427009 228 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 POLR2KP2-201ENST00000438155 177 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 U8.19-201ENST00000459095 133 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 AL133373.1-201ENST00000497098 94 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 MRPS35P2-201ENST00000508242 191 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU7-116P-201ENST00000516940 62 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 GHRLOS.1-201ENST00000610995 70 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC108706.1-201ENST00000611053 297 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 MIR548AY-201ENST00000617669 107 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC134026.1-201ENST00000623249 2239 ntBASIC0.86□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU4-90P-201ENST00000362773 141 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.84-201ENST00000363011 104 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-1209P-201ENST00000363655 107 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-674P-201ENST00000363831 107 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-290P-201ENST00000365212 101 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.569-201ENST00000384749 103 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 MIR891A-201ENST00000401237 79 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 MIR1278-201ENST00000408753 81 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 MTND5P22-201ENST00000458380 195 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 RPS26P48-201ENST00000491713 339 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 SNORD45.4-201ENST00000516629 73 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC090142.3-201ENST00000519012 385 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 MIR3973-201ENST00000579824 107 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 AL096861.1-201ENST00000610899 123 ntBASIC0.85□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.217-201ENST00000364214 105 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.336-201ENST00000365307 109 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-163P-201ENST00000384396 106 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-1105P-201ENST00000384774 107 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 RNU6-1109P-201ENST00000391187 107 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 AL603910.2-201ENST00000407268 136 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 SNORA36B-201ENST00000410438 131 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.621-201ENST00000411065 96 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 SNORD11-201ENST00000459124 84 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 Y_RNA.641-201ENST00000459414 105 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 RN7SKP88-201ENST00000516847 250 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 AP003716.2-201ENST00000528260 108 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 AP003733.2-201ENST00000529409 171 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 AP003072.1-201ENST00000531740 145 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 MIR3192-201ENST00000584920 77 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC005357.1-201ENST00000588399 301 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 7SK.8-201ENST00000612110 250 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 7SK.11-201ENST00000615477 250 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 7SK.13-201ENST00000622040 250 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 AC022140.2-201ENST00000623500 188 ntBASIC0.84□□□□□ -2.27
TMX2-CTNND1H3BSU7 HSBP1P2-201ENST00000299671 229 ntBASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-694P-201ENST00000364071 147 ntBASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 SNORA63C-201ENST00000364578 129 ntBASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-326P-201ENST00000365480 107 ntBASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 Y_RNA.512-201ENST00000384518 102 ntBASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 AL731563.1-201ENST00000442202 214 ntBASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC048334.1-201ENST00000477975 159 ntBASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNY3P15-201ENST00000516297 97 ntBASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 PRELID3BP2-201ENST00000605362 201 ntBASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 AL020996.3-201ENST00000606617 222 ntBASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 AL021707.8-201ENST00000609428 183 ntBASIC0.83□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU1-133P-201ENST00000364867 167 ntBASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-639P-201ENST00000384074 107 ntBASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 MIR548F4-201ENST00000408515 105 ntBASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-1203P-201ENST00000410703 110 ntBASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 MLLT10P1-201ENST00000418346 262 ntBASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC024067.1-201ENST00000426199 223 ntBASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU6-437P-201ENST00000459408 95 ntBASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 RPL23AP54-201ENST00000495129 419 ntBASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC091959.1-201ENST00000495857 238 ntBASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 SNORD116-28-201ENST00000516123 91 ntBASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 RNU2-31P-201ENST00000516954 155 ntBASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 AP001282.2-201ENST00000616149 309 ntBASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 AC027335.2-201ENST00000624030 375 ntBASIC0.82□□□□□ -2.28
TMX2-CTNND1H3BSU7 UBE2WP1-201ENST00000362030 340 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 461.7 ms