Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 RNU6-874P-201ENST00000362390 105 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 RNU6-879P-201ENST00000364328 108 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 RNU4-75P-201ENST00000364621 146 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 Y_RNA.296-201ENST00000364930 108 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 RNU6-652P-201ENST00000365488 107 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 MIR588-201ENST00000384900 83 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 CHEK2P4-201ENST00000450340 246 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 RNU7-73P-201ENST00000458743 63 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 AC018638.8-201ENST00000588755 281 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 POLR3GP1-201ENST00000594073 261 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 AC006380.1-201ENST00000603598 186 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 AC134878.1-201ENST00000619901 243 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 MIR499B-201ENST00000636498 73 ntBASIC-0.47□□□□□ -2.48
TRAV3A0A0B4J244 RNU6-842P-201ENST00000384269 107 ntBASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 MIR518F-201ENST00000384973 87 ntBASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 MTCO3P40-201ENST00000392516 676 ntBASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 MCFD2P1-201ENST00000417812 300 ntBASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 AC096531.1-201ENST00000419107 107 ntBASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 PRDX4P1-201ENST00000507189 574 ntBASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 RNU7-116P-201ENST00000516940 62 ntBASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 LRRC34P1-201ENST00000542742 915 ntBASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 AC138869.1-201ENST00000568623 124 ntBASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 MIR5188-201ENST00000583467 113 ntBASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 Z69908.1-201ENST00000622603 247 ntBASIC-0.48□□□□□ -2.49
TRAV3A0A0B4J244 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 SNORA1.1-201ENST00000364671 133 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 RNU6-740P-201ENST00000364734 105 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 SNORD14C-201ENST00000365382 88 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 RNU6-601P-201ENST00000384540 107 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 SNORD28-201ENST00000384706 75 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 AL603910.2-201ENST00000407268 136 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 RNA5SP25-201ENST00000410815 110 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 RN7SKP142-201ENST00000411236 328 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 SUMO1P3-201ENST00000439961 304 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 SNORD5.1-201ENST00000458800 75 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 AC055872.1-201ENST00000570978 278 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 MIR4639-201ENST00000584938 69 ntBASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.49□□□□□ -2.49
TRAV3A0A0B4J244 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 RNU6-674P-201ENST00000363831 107 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 SNORD12B-201ENST00000410433 91 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 AC236972.2-201ENST00000434979 310 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 RNU6-436P-201ENST00000516171 114 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 RNU6-504P-201ENST00000516568 104 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 MIR548AD-201ENST00000584780 82 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 AC108676.2-201ENST00000605225 163 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 MIR3666-201ENST00000607845 111 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 AC027449.1-201ENST00000608890 407 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 AL050303.3-201ENST00000613704 284 ntBASIC-0.5□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-34-201ENST00000362441 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-12-201ENST00000362583 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-29-201ENST00000362834 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-9-201ENST00000362912 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-21-201ENST00000362963 81 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-14-201ENST00000363090 81 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-13-201ENST00000363358 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-41-201ENST00000363608 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-11-201ENST00000363616 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-5-201ENST00000363633 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-39-201ENST00000363694 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-4-201ENST00000363810 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-16-201ENST00000363887 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-6-201ENST00000363942 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-42-201ENST00000364273 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-15-201ENST00000364809 81 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-1-201ENST00000364961 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-26-201ENST00000365067 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-10-201ENST00000365073 81 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-43-201ENST00000365503 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 SNORD115-36-201ENST00000365629 82 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 RNU6-306P-201ENST00000384617 107 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 RNA5SP300-201ENST00000391197 107 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 RNU6-602P-201ENST00000411155 105 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 USP9YP30-201ENST00000430729 455 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 RPS29P8-201ENST00000445109 171 ntBASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.51□□□□□ -2.49
TRAV3A0A0B4J244 AC107297.1-201ENST00000459991 176 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms