Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MT-TI-201ENST00000387365 69 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 RNU6-279P-201ENST00000391297 101 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 RPS15AP28-201ENST00000435088 386 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 RNU7-57P-201ENST00000459540 60 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 AC107626.1-201ENST00000471084 183 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 RPS26P55-201ENST00000471178 356 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 RNU6-1299P-201ENST00000516316 100 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 RNU6-158P-201ENST00000517104 100 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 MIR3129-201ENST00000581095 76 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 MIR4506-201ENST00000584693 77 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 MIR3202-2-201ENST00000635980 79 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 RNU6-117P-201ENST00000365415 107 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 MIR488-201ENST00000365739 83 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 RNU6-1296P-201ENST00000383879 107 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 RNU6-979P-201ENST00000383896 107 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 SNORD88.1-201ENST00000408684 91 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 HMGN2P20-201ENST00000437531 273 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 MTATP6P21-201ENST00000440681 189 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 RPS4XP11-201ENST00000446897 772 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 RPS26P48-201ENST00000491713 339 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 RNU6-1073P-201ENST00000517182 106 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 MIR3117-201ENST00000584034 78 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 AC006435.5-201ENST00000624486 112 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 AC026241.1-201ENST00000517873 2142 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 RNU6-438P-201ENST00000365561 103 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 PGBD4P5-201ENST00000445958 426 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 RPL36AP48-201ENST00000485521 314 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 AC011604.1-201ENST00000545978 196 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 AC084364.2-201ENST00000546924 395 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 MIR6715B-201ENST00000637172 77 ntBASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
NOTCH3Q9UM47 Y_RNA.30-201ENST00000362572 97 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 RNU4-36P-201ENST00000364294 144 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 U3.15-201ENST00000365398 212 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 RNU6-787P-201ENST00000384032 107 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 MIR221-201ENST00000385135 110 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 MIR873-201ENST00000401120 77 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 COX6CP6-201ENST00000490840 228 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 RNU2-13P-201ENST00000515909 113 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 RNY4P20-201ENST00000516678 93 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 RNU6-1270P-201ENST00000517128 108 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 MIR4662B-201ENST00000579498 81 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 FAM35CP-201ENST00000554755 2470 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 RNU6-271P-201ENST00000363858 105 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 RNU6-1138P-201ENST00000365359 106 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 MIR759-201ENST00000390224 91 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 RNA5SP181-201ENST00000410246 98 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 RNA5SP476-201ENST00000516613 103 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 DEFB131E-201ENST00000532329 154 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 MIR4753-201ENST00000585119 83 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 MIR6845-201ENST00000613182 61 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 AC009831.4-201ENST00000620744 325 ntBASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
NOTCH3Q9UM47 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 RNU6-832P-201ENST00000363319 107 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 Y_RNA.219-201ENST00000364232 113 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 RNA5SP189-201ENST00000364920 115 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 SNORA51.5-201ENST00000384126 131 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 RNU6-1124P-201ENST00000384169 107 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 RNU6-750P-201ENST00000390946 107 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 MIR1912-201ENST00000410389 80 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 RPL39P25-201ENST00000449384 154 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 AL441985.1-201ENST00000457727 251 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 RNU6-221P-201ENST00000459541 99 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 AC107297.1-201ENST00000459991 176 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 MRPS17P9-201ENST00000511924 393 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 RNA5SP20-201ENST00000515976 84 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 SNORA31.15-201ENST00000516771 132 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 RNU6-826P-201ENST00000516827 104 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 AC026421.1-201ENST00000519101 163 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 MALAT1.1-201ENST00000618249 95 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 AC016717.2-201ENST00000609089 5141 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 AC009487.4-201ENST00000624969 3585 ntBASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
NOTCH3Q9UM47 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 262.7 ms